Ptf1a (pancreas specific transcription factor, 1a) - Rat Genome Database

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Gene: Ptf1a (pancreas specific transcription factor, 1a) Mus musculus
Analyze
Symbol: Ptf1a
Name: pancreas specific transcription factor, 1a
RGD ID: 731252
MGI Page MGI
Description: Enables DNA-binding transcription activator activity, RNA polymerase II-specific; E-box binding activity; and chromatin binding activity. Involved in several processes, including neural retina development; regulation of neural retina development; and retinoic acid receptor signaling pathway. Acts upstream of or within several processes, including neuron fate commitment; positive regulation of transcription by RNA polymerase II; and retina morphogenesis in camera-type eye. Part of transcription regulator complex. Is expressed in several structures, including central nervous system; epidermis; eye; foregut-midgut junction; and genitourinary system. Used to study pancreatic carcinoma. Human ortholog(s) of this gene implicated in pancreatic agenesis 2. Orthologous to human PTF1A (pancreas associated transcription factor 1a).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: bHLH transcription factor p48; bHLHa; bHLHa29; p48 DNA-binding subunit of transcription factor PTF1; pancreas transcription factor 1 subunit alpha; pancreas transcription factor1 p48 subunit; pancreas-specific transcription factor 1a; PTF1-p; PTF1-p48; PTF1p48
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39219,450,474 - 19,452,312 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl219,450,474 - 19,452,312 (+)EnsemblGRCm39 Ensembl
GRCm38219,445,663 - 19,447,501 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl219,445,663 - 19,447,501 (+)EnsemblGRCm38mm10GRCm38
MGSCv37219,367,290 - 19,369,128 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36219,363,417 - 19,365,246 (+)NCBIMGSCv36mm8
Celera219,344,731 - 19,346,569 (+)NCBICelera
Cytogenetic Map2A3NCBI
cM Map213.37NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (ISO,ISS)
cytosol  (TAS)
nucleoplasm  (TAS)
nucleus  (IC,ISO,ISS)
transcription regulator complex  (IDA,ISO,ISS,TAS)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal amacrine cell morphology  (IAGP)
abnormal anus morphology  (IAGP)
abnormal brain commissure morphology  (IAGP)
abnormal branching involved in pancreas development  (IAGP)
abnormal cerebellar granule layer morphology  (IAGP)
abnormal cerebellar molecular layer  (IAGP)
abnormal cerebellum development  (IAGP)
abnormal digestion  (IAGP)
abnormal digestive system development  (IAGP)
abnormal duodenum morphology  (IAGP)
abnormal endocrine pancreas morphology  (IAGP)
abnormal eye development  (IAGP)
abnormal GABAergic neuron morphology  (IAGP)
abnormal gait  (IAGP)
abnormal glutaminergic neuron morphology  (IAGP)
abnormal hepatic portal vein morphology  (IAGP)
abnormal hepatic portal vein thrombosis  (IAGP)
abnormal inhibitory postsynaptic currents  (IAGP)
abnormal innervation  (IAGP)
abnormal interleukin level  (IAGP)
abnormal motor coordination/balance  (IAGP)
abnormal nervous system morphology  (IAGP)
abnormal neural tube morphology  (IAGP)
abnormal neuron differentiation  (IAGP)
abnormal nucleus pulposus morphology  (IAGP)
abnormal paired-pulse inhibition  (IAGP)
abnormal pancreas development  (IAGP)
abnormal pancreas morphology  (IAGP)
abnormal pancreatic acinar cell morphology  (IAGP)
abnormal pancreatic acinus morphology  (IAGP)
abnormal pancreatic alpha cell differentiation  (IAGP)
abnormal pancreatic bud formation  (IAGP)
abnormal pancreatic duct morphology  (IAGP)
abnormal pancreatic islet morphology  (IAGP)
abnormal pancreatic islet size  (IAGP)
abnormal Purkinje cell differentiation  (IAGP)
abnormal response/metabolism to endogenous compounds  (IAGP)
abnormal retina layer morphology  (IAGP)
abnormal retina morphology  (IAGP)
abnormal retina neuronal layer morphology  (IAGP)
abnormal retina outer plexiform layer morphology  (IAGP)
abnormal skeleton morphology  (IAGP)
abnormal spinal cord dorsal horn morphology  (IAGP)
abnormal spleen morphology  (IAGP)
abnormal synaptic bouton morphology  (IAGP)
abnormal synaptic vesicle number  (IAGP)
abnormal tail morphology  (IAGP)
abnormal tumor necrosis factor level  (IAGP)
absent amacrine cells  (IAGP)
absent cerebellum  (IAGP)
absent pancreas  (IAGP)
absent pancreatic acini  (IAGP)
absent retina horizontal cells  (IAGP)
absent retina inner plexiform layer  (IAGP)
absent tail  (IAGP)
ataxia  (IAGP)
chronic pancreas inflammation  (IAGP)
cyanosis  (IAGP)
decreased body length  (IAGP)
decreased body weight  (IAGP)
decreased circulating amylase level  (IAGP)
decreased classified tumor incidence  (IAGP)
decreased excitatory postsynaptic current amplitude  (IAGP)
decreased metastatic potential  (IAGP)
decreased neuronal precursor cell number  (IAGP)
decreased pancreatic acinar cell number  (IAGP)
decreased pancreatic alpha cell number  (IAGP)
decreased pancreatic islet number  (IAGP)
decreased susceptibility to induced pancreatitis  (IAGP)
decreased tumor incidence  (IAGP)
decreased tumor-free survival time  (IAGP)
dilated gallbladder  (IAGP)
dilated pancreatic duct  (IAGP)
disorganized pancreatic islets  (IAGP)
distended abdomen  (IAGP)
enlarged pancreas  (IAGP)
enlarged spleen  (IAGP)
hemorrhagic ascites  (IAGP)
hepatic necrosis  (IAGP)
hypoglycemia  (IAGP)
impaired coordination  (IAGP)
impaired glucose tolerance  (IAGP)
increased body weight  (IAGP)
increased carcinoma incidence  (IAGP)
increased incidence of induced tumors  (IAGP)
increased medulloblastoma incidence  (IAGP)
increased metastatic potential  (IAGP)
increased pancreas tumor incidence  (IAGP)
increased pancreas weight  (IAGP)
increased pancreatic alpha cell number  (IAGP)
increased pancreatic ductal adenocarcinoma incidence  (IAGP)
increased pancreatic intraepithelial neoplasia incidence  (IAGP)
increased retina ganglion cell number  (IAGP)
increased susceptibility to injury  (IAGP)
increased susceptibility to xenobiotic induced morbidity/mortality  (IAGP)
increased tumor incidence  (IAGP)
increased tumor-free survival time  (IAGP)
jaundice  (IAGP)
loss of GABAergic neurons  (IAGP)
lung inflammation  (IAGP)
neonatal lethality, complete penetrance  (IAGP)
no abnormal phenotype detected  (IAGP)
pancreas cyst  (IAGP)
pancreas fibrosis  (IAGP)
pancreas hypoplasia  (IAGP)
pancreas inflammation  (IAGP)
pancreas lipomatosis  (IAGP)
pancreatic acinar hypoplasia  (IAGP)
pancreatic acinar-to-ductal metaplasia  (IAGP)
paralysis  (IAGP)
postnatal growth retardation  (IAGP)
postnatal lethality, complete penetrance  (IAGP)
premature death  (IAGP)
short tail  (IAGP)
short vertebral column  (IAGP)
small cerebellum  (IAGP)
small pancreas  (IAGP)
thick retina ganglion layer  (IAGP)
weight loss  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. The p48 DNA-binding subunit of transcription factor PTF1 is a new exocrine pancreas-specific basic helix-loop-helix protein. Krapp A, etal., EMBO J 1996 Aug 15;15(16):4317-29.
3. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
4. MGDs mouse GO annotations MGD data from the GO Consortium
5. MGD IEA MGD IEA
6. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
7. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
8. Mouse MP Annotation Import Pipeline RGD automated import pipeline
9. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
10. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
11. Database resources of the National Center for Biotechnology Information. Wheeler DL, etal., Nucleic Acids Res 2001 Jan 1;29(1):11-6.
Additional References at PubMed
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PMID:11279116   PMID:11318877   PMID:11562365   PMID:11784060   PMID:11912494   PMID:11960711   PMID:12185368   PMID:12477932   PMID:12559489   PMID:12624426   PMID:12636919   PMID:14517990  
PMID:14651921   PMID:14699589   PMID:14706336   PMID:14706696   PMID:14736742   PMID:14736744   PMID:15280211   PMID:15543146   PMID:15618518   PMID:15668393   PMID:15739225   PMID:15894267  
PMID:16026781   PMID:16039563   PMID:16141072   PMID:16141073   PMID:16186384   PMID:16192304   PMID:16291784   PMID:16354684   PMID:16386727   PMID:16418487   PMID:16518820   PMID:16602821  
PMID:16690754   PMID:16710472   PMID:16715081   PMID:16751181   PMID:16790481   PMID:16912273   PMID:16951258   PMID:17001468   PMID:17075007   PMID:17114584   PMID:17114585   PMID:17222338  
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PMID:37515840   PMID:37543088   PMID:37559908   PMID:37625403   PMID:37641131   PMID:37712427   PMID:37738262   PMID:37739117   PMID:37751417   PMID:37796967   PMID:37829188   PMID:37913768  
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PMID:38948355   PMID:38958646   PMID:39005053   PMID:39037766   PMID:39048609   PMID:39307290   PMID:39547237  


Genomics

Comparative Map Data
Ptf1a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39219,450,474 - 19,452,312 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl219,450,474 - 19,452,312 (+)EnsemblGRCm39 Ensembl
GRCm38219,445,663 - 19,447,501 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl219,445,663 - 19,447,501 (+)EnsemblGRCm38mm10GRCm38
MGSCv37219,367,290 - 19,369,128 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36219,363,417 - 19,365,246 (+)NCBIMGSCv36mm8
Celera219,344,731 - 19,346,569 (+)NCBICelera
Cytogenetic Map2A3NCBI
cM Map213.37NCBI
PTF1A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381023,192,312 - 23,194,245 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1023,192,312 - 23,194,245 (+)EnsemblGRCh38hg38GRCh38
GRCh371023,481,241 - 23,483,174 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361023,521,466 - 23,523,187 (+)NCBINCBI36Build 36hg18NCBI36
Build 341023,521,465 - 23,522,841NCBI
Celera1023,169,055 - 23,170,776 (+)NCBICelera
Cytogenetic Map10p12.2NCBI
HuRef1023,141,665 - 23,143,386 (+)NCBIHuRef
CHM1_11023,481,988 - 23,483,709 (+)NCBICHM1_1
T2T-CHM13v2.01023,211,306 - 23,213,239 (+)NCBIT2T-CHM13v2.0
Ptf1a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81786,959,621 - 86,961,475 (+)NCBIGRCr8
mRatBN7.21782,051,281 - 82,053,135 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1782,051,281 - 82,053,135 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1785,516,340 - 85,518,202 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01789,351,776 - 89,353,638 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01783,368,532 - 83,370,394 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01786,199,623 - 86,201,477 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1786,199,623 - 86,201,477 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01787,911,175 - 87,913,029 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41793,494,689 - 93,496,543 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11793,505,521 - 93,507,376 (+)NCBI
Celera1781,323,632 - 81,325,486 (+)NCBICelera
Cytogenetic Map17q12.3NCBI
Ptf1a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554295,808,124 - 5,809,522 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554295,807,804 - 5,809,522 (-)NCBIChiLan1.0ChiLan1.0
PTF1A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2835,862,703 - 35,883,010 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11035,868,097 - 35,888,336 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01023,356,165 - 23,359,579 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11023,731,808 - 23,732,880 (+)NCBIpanpan1.1PanPan1.1panPan2
PTF1A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1210,069,594 - 10,071,360 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl210,069,581 - 10,071,336 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha28,761,404 - 8,763,210 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.028,265,759 - 8,267,565 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl28,265,753 - 8,267,830 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.127,631,134 - 7,632,939 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.027,715,133 - 7,716,942 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.027,882,444 - 7,884,250 (-)NCBIUU_Cfam_GSD_1.0
Ptf1a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934422,979,751 - 22,981,585 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365204,978,896 - 4,980,648 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365204,978,896 - 4,980,648 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PTF1A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1051,817,924 - 51,819,960 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11051,817,697 - 51,820,147 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21057,473,803 - 57,475,233 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PTF1A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1922,944,122 - 22,965,905 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl922,964,164 - 22,965,565 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605128,727,857 - 28,729,812 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ptf1a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247965,549,184 - 5,550,439 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247965,548,982 - 5,550,563 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ptf1a
62 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:67
Count of miRNA genes:58
Interacting mature miRNAs:65
Transcripts:ENSMUST00000028068
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
8552707Cia23_mcollagen induced arthritis QTL 23 (mouse)Not determined21212953766556453Mouse
4142333Tgq10_mtriglyceride QTL 10 (mouse)Not determined125324559Mouse
12904743Carcdq3_mcardiac collagen deposition QTL 3 (mouse)2323494028179150Mouse
1300624Insq7_minsulin QTL 7 (mouse)Not determined2938444643384575Mouse
1301790Pcfm1_mperiosteal circumference and femur length 1 (mouse)Not determined2823629642236396Mouse
1301980Fcsa5_mfemoral cross-sectional area 5 (mouse)Not determined2767911541679261Mouse
4141836Tgq11_mtriglyceride QTL 11 (mouse)Not determined125324559Mouse
10045633Heal15_mwound healing/regeneration 15 (mouse)Not determined2121989642Mouse
1301769Orgwq2_morgan weight QTL 2 (mouse)Not determined2388712693421651Mouse
1301641Sbmd2_mspinal bone mineral density 2 (mouse)Not determined21421456748214713Mouse
1301838Sluc16_msusceptibility to lung cancer 16 (mouse)Not determined2126529589Mouse
10043876Adip22_madiposity 22 (mouse)Not determined2830805142308240Mouse
10755513Amzn4_manatomical modifier of Zfp423 4 (mouse)2938444643384575Mouse
12903993Opfaq1_mopen field activity QTL 1 (mouse)2967669127022642Mouse

Markers in Region
Ptf1a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38219,446,601 - 19,447,029UniSTSGRCm38
MGSCv37219,368,228 - 19,368,656UniSTSGRCm37
Celera219,345,669 - 19,346,097UniSTS
Cytogenetic Map2A2UniSTS
cM Map2 UniSTS
PMC317250P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38219,445,870 - 19,446,397UniSTSGRCm38
MGSCv37219,367,497 - 19,368,024UniSTSGRCm37
Celera219,344,938 - 19,345,465UniSTS
Cytogenetic Map2A2UniSTS
Ptf1a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38219,446,610 - 19,447,047UniSTSGRCm38
MGSCv37219,368,237 - 19,368,674UniSTSGRCm37
Celera219,345,678 - 19,346,115UniSTS
Cytogenetic Map2A2UniSTS
Ptf1a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map2A2UniSTS


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000028068   ⟹   ENSMUSP00000028068
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl219,450,474 - 19,452,312 (+)Ensembl
GRCm38.p6 Ensembl219,445,663 - 19,447,501 (+)Ensembl
RefSeq Acc Id: NM_018809   ⟹   NP_061279
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39219,450,474 - 19,452,312 (+)NCBI
GRCm38219,445,663 - 19,447,501 (+)ENTREZGENE
MGSCv37219,367,290 - 19,369,128 (+)RGD
Celera219,344,731 - 19,346,569 (+)RGD
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_061279   ⟸   NM_018809
- UniProtKB: Q9QYF5 (UniProtKB/Swiss-Prot),   Q9QYF6 (UniProtKB/Swiss-Prot),   Q9QX98 (UniProtKB/Swiss-Prot),   A2ATA7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000028068   ⟸   ENSMUST00000028068
Protein Domains
bHLH

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9QX98-F1-model_v2 AlphaFold Q9QX98 1-324 view protein structure

Promoters
RGD ID:6876448
Promoter ID:EPDNEW_M1675
Type:single initiation site
Name:Ptf1a_1
Description:Mus musculus pancreas specific transcription factor, 1a , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38219,445,642 - 19,445,702EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1328312 AgrOrtholog
Ensembl Genes ENSMUSG00000026735 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000028068 ENTREZGENE
  ENSMUST00000028068.3 UniProtKB/Swiss-Prot
Gene3D-CATH 4.10.280.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro bHLH_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  E-box_TF_Regulators UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HLH_DNA-bd_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:19213 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1328312 ENTREZGENE
NCBI Gene 19213 ENTREZGENE
PANTHER BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PANCREAS TRANSCRIPTION FACTOR 1 SUBUNIT ALPHA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam HLH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ptf1a PhenoGen
PROSITE BHLH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART HLH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF47459 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A2ATA7 ENTREZGENE, UniProtKB/TrEMBL
  PTF1A_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q9QYF5 ENTREZGENE
  Q9QYF6 ENTREZGENE
UniProt Secondary Q9QYF5 UniProtKB/Swiss-Prot
  Q9QYF6 UniProtKB/Swiss-Prot