Cit (citron) - Rat Genome Database

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Gene: Cit (citron) Mus musculus
Analyze
Symbol: Cit
Name: citron
RGD ID: 731049
MGI Page MGI
Description: Enables protein serine/threonine kinase activity. Involved in generation of neurons and mitotic cell cycle. Acts upstream of or within several processes, including dendrite development; metaphase/anaphase transition of mitotic cell cycle; and negative regulation of dendrite morphogenesis. Located in actin cytoskeleton; ruffle; and vacuole. Is expressed in several structures, including central nervous system; hemolymphoid system gland; respiratory system; sensory organ; and skeleton. Human ortholog(s) of this gene implicated in primary autosomal recessive microcephaly 17. Orthologous to human CIT (citron rho-interacting serine/threonine kinase).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: C030025P15Rik; Cit-; Cit-k; citron kinase; citron Rho-interacting kinase; citron-N; CRIK; CRIK-SK; rho-interacting, serine/threonine-protein kinase 21
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395115,983,284 - 116,147,012 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5115,983,337 - 116,147,006 (+)EnsemblGRCm39 Ensembl
GRCm385115,845,224 - 116,008,953 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5115,845,278 - 116,008,947 (+)EnsemblGRCm38mm10GRCm38
MGSCv375116,295,665 - 116,456,352 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365116,106,655 - 116,267,342 (+)NCBIMGSCv36mm8
Celera5112,946,512 - 113,107,010 (+)NCBICelera
Cytogenetic Map5FNCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (EXP)
17beta-estradiol  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
3,4-methylenedioxymethamphetamine  (EXP)
4,4'-diaminodiphenylmethane  (EXP)
4,4'-sulfonyldiphenol  (EXP)
acetamide  (ISO)
aflatoxin B1  (ISO)
Aflatoxin B2 alpha  (ISO)
ammonium chloride  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (EXP,ISO)
atrazine  (EXP,ISO)
azathioprine  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[e]pyrene  (ISO)
bisphenol A  (EXP,ISO)
butanal  (ISO)
C60 fullerene  (ISO)
cadmium atom  (ISO)
calcitriol  (ISO)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
coumarin  (ISO)
coumestrol  (ISO)
CU-O LINKAGE  (ISO)
cyclosporin A  (ISO)
dicrotophos  (ISO)
dieldrin  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
epoxiconazole  (EXP)
ethanol  (EXP)
folic acid  (ISO)
furan  (ISO)
genistein  (ISO)
gentamycin  (ISO)
geraniol  (ISO)
glyphosate  (ISO)
ivermectin  (ISO)
L-ascorbic acid  (ISO)
leflunomide  (ISO)
lucanthone  (ISO)
methapyrilene  (ISO)
methotrexate  (ISO)
N,N-diethyl-m-toluamide  (ISO)
N-Nitrosopyrrolidine  (ISO)
nickel dichloride  (ISO)
oxaliplatin  (ISO)
ozone  (EXP)
paracetamol  (ISO)
pentachlorophenol  (EXP)
pentanal  (ISO)
permethrin  (ISO)
phenylmercury acetate  (ISO)
propanal  (ISO)
quercetin  (ISO)
resveratrol  (ISO)
rotenone  (ISO)
SB 431542  (ISO)
silver atom  (EXP)
silver(0)  (EXP)
sodium arsenite  (EXP,ISO)
T-2 toxin  (ISO)
testosterone  (ISO)
titanium dioxide  (EXP,ISO)
topotecan  (ISO)
trimellitic anhydride  (EXP)
triptonide  (EXP)
troglitazone  (ISO)
trovafloxacin  (EXP)
valproic acid  (ISO)
vinclozolin  (ISO)
xylitol  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. Defective neurogenesis in citron kinase knockout mice by altered cytokinesis and massive apoptosis. Di Cunto F, etal., Neuron 2000 Oct;28(1):115-27.
2. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. MGD IEA MGD IEA
5. Mouse MP Annotation Import Pipeline RGD automated import pipeline
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. Characterization of seizures in the flathead rat: a new genetic model of epilepsy in early postnatal development. Sarkisian MR, etal., Epilepsia. 1999 Apr;40(4):394-400.
Additional References at PubMed
PMID:8543060   PMID:8889548   PMID:9697773   PMID:9792683   PMID:9870943   PMID:10349636   PMID:10493740   PMID:10862698   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12411428  
PMID:12432070   PMID:12466851   PMID:12477932   PMID:12520002   PMID:12764032   PMID:12781320   PMID:14610273   PMID:15489334   PMID:15741177   PMID:16141072   PMID:16141073   PMID:16452087  
PMID:16602821   PMID:17114649   PMID:17143286   PMID:17488780   PMID:18799693   PMID:19148892   PMID:20369383   PMID:20436275   PMID:21267068   PMID:21677750   PMID:21873635   PMID:22293177  
PMID:23055939   PMID:23444367   PMID:24154525   PMID:24952961   PMID:26496610   PMID:26581405   PMID:26586574   PMID:27507650   PMID:27562601   PMID:28199840   PMID:28671696   PMID:28706196  
PMID:29921697   PMID:30093551   PMID:30865227   PMID:32325033   PMID:33622776   PMID:35484145  


Genomics

Comparative Map Data
Cit
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395115,983,284 - 116,147,012 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5115,983,337 - 116,147,006 (+)EnsemblGRCm39 Ensembl
GRCm385115,845,224 - 116,008,953 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5115,845,278 - 116,008,947 (+)EnsemblGRCm38mm10GRCm38
MGSCv375116,295,665 - 116,456,352 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365116,106,655 - 116,267,342 (+)NCBIMGSCv36mm8
Celera5112,946,512 - 113,107,010 (+)NCBICelera
Cytogenetic Map5FNCBI
CIT
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3812119,685,791 - 119,877,320 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl12119,685,791 - 119,877,320 (-)EnsemblGRCh38hg38GRCh38
GRCh3712120,123,596 - 120,315,124 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3612118,607,981 - 118,799,475 (-)NCBINCBI36Build 36hg18NCBI36
Build 3412118,586,317 - 118,777,812NCBI
Celera12119,756,651 - 119,948,207 (-)NCBICelera
Cytogenetic Map12q24.23NCBI
HuRef12117,131,727 - 117,325,161 (-)NCBIHuRef
CHM1_112120,091,103 - 120,282,752 (-)NCBICHM1_1
T2T-CHM13v2.012119,673,075 - 119,864,647 (-)NCBIT2T-CHM13v2.0
Cit
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21240,603,073 - 40,764,846 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1240,605,563 - 40,763,860 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1241,778,820 - 41,938,342 (-)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.01242,392,543 - 42,552,063 (-)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.01241,453,005 - 41,612,527 (-)NCBIRnor_WKY
Rnor_6.01246,334,669 - 46,494,152 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1246,334,665 - 46,494,174 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01248,136,329 - 48,295,119 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41241,858,134 - 42,019,601 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11241,721,050 - 41,801,648 (-)NCBI
Celera1242,234,665 - 42,392,523 (-)NCBICelera
Cytogenetic Map12q16NCBI
Cit
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545511,704,964 - 11,872,419 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495545511,705,015 - 11,871,762 (+)NCBIChiLan1.0ChiLan1.0
CIT
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.112120,641,747 - 120,832,511 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl12120,641,747 - 120,832,511 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v012117,264,627 - 117,456,069 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
CIT
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12615,721,500 - 15,885,133 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2615,723,690 - 15,884,343 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2615,726,097 - 15,891,228 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02615,988,829 - 16,154,093 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2615,989,170 - 16,153,050 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12615,958,883 - 16,123,644 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02616,027,058 - 16,192,182 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02616,068,008 - 16,233,213 (-)NCBIUU_Cfam_GSD_1.0
Cit
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118146,492,141 - 146,649,860 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936668991,036 - 1,146,294 (+)EnsemblSpeTri2.0
SpeTri2.0NW_004936668991,043 - 1,146,578 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CIT
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1433,009,877 - 33,196,286 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11433,009,828 - 33,195,985 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21434,987,299 - 35,141,860 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CIT
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.111115,026,809 - 115,220,558 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl11115,025,045 - 115,219,356 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037129,885,578 - 130,080,578 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cit
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474713,750,283 - 13,915,715 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474713,749,126 - 13,918,222 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:7280
Count of miRNA genes:1004
Interacting mature miRNAs:1461
Transcripts:ENSMUST00000051704, ENSMUST00000102560, ENSMUST00000112008, ENSMUST00000122877, ENSMUST00000123736, ENSMUST00000127976, ENSMUST00000128702, ENSMUST00000134609, ENSMUST00000136780, ENSMUST00000137952, ENSMUST00000139881, ENSMUST00000141101, ENSMUST00000145363, ENSMUST00000146387, ENSMUST00000147330, ENSMUST00000147479, ENSMUST00000148245, ENSMUST00000153407
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11341716Rvfs3_mRift Valley fever susceptibility 3 (mouse)526441234138455402Mouse
4142064Tmc1m4_mTmc1 modifier 4 (mouse)Not determined554500177127001072Mouse
26884395Humsd2_mhumerus midshaft diameter 2, 10 week (mouse)570057343132528839Mouse
27226719Tibw6_mtibia width 6, proximal, 16 week (mouse)572857343139985755Mouse
25314315Mlh1fc4_mMLH1 foci count 4 (mouse)574460661132528839Mouse
13506928Recrq8_mrecombination rate in male meiosis QTL 8 (mouse)574460661132528839Mouse
1357431Cia27_mcollagen induced arthritis 27 (mouse)Not determined575315348120018629Mouse
10401245Bglu18_mblood glucose level 18 (mouse)Not determined582838468116838597Mouse
13464242Ahl17_mage related hearing loss, early onset 17 (mouse)582838468116838597Mouse
10043958Chldq12_mcholesterol and HDL QTL 12 (mouse)Not determined587386871121387065Mouse
1301126Bwem1_mbody weight day 30 males 1 (mouse)Not determined587386871121387065Mouse
13464241Ahl18_mage related hearing loss, early onset 18 (mouse)587386871121387065Mouse
1300801Drb2_mdopamine receptor binding 2 (mouse)Not determined587386871121387065Mouse
1301399Cpfd3_mcerebellum pattern fissures (mouse)Not determined587386871121387065Mouse
1357725Eae39_mexperimental allergic encephalomyelitis 39 (mouse)Not determined589418876118864028Mouse
1300968Skts4_mskin tumor susceptibility 4 (mouse)Not determined589418876124238239Mouse
1301362Prnr1_mprion resistance 1 (mouse)Not determined589418876146787935Mouse
11049562Lmr24f_mleishmaniasis resistance 24f (mouse)590320962124321041Mouse
1301457Cfsw2_mcystic fibrosis survival to weaning 2 (mouse)Not determined590561006124561151Mouse
1300993Hycdc_mhypercapnic duty cycle (mouse)Not determined590561006124561151Mouse
9587780Afw16_mabdominal fat weight QTL 16 (mouse)Not determined592830166126830285Mouse
1301974Chab7_mcholesterol absorption 7 (mouse)Not determined595233214129233330Mouse
1357644Egrd1_mearly growth rate, direct effect 1 (mouse)Not determined595434580129434786Mouse
10402486Dipa1_mdrug induced psychomotor activation 1 (mouse)Not determined595465549129465722Mouse
13464244Ahl19_mage related hearing loss, early onset 19 (mouse)595465549129465722Mouse
1558774Lith17_mlithogenic gene 17 (mouse)Not determined595465549129465722Mouse
1300940Actd3_mactivity-distance traveled 3 (mouse)Not determined596320385130320533Mouse
1300659Pcd8ts1_mp-glycoprotein positive CD8 T cell subset 1 (mouse)Not determined597021753131021986Mouse
1301858Smdq1_msegregation of mitochondrial DNA QTL 1 (mouse)Not determined597021753131021986Mouse
1301042Elmaz1_melevated maze behavior 1 (mouse)Not determined598019649116876624Mouse
4141519Hmtb5_mhemostasis and thrombosis bleeding time 5 (mouse)Not determined99949422126882944Mouse
12904945Tammq2_mtibialis anterior muscle mass QTL 2 (mouse)5100665965134665965Mouse
12904959Smmq1_msoleus muscle mass QTL 1 (mouse)5100665965134665965Mouse
12859290Criq2_mCitrobacter rodentium infection QTL 2 (mouse)5101332579135332579Mouse
1301624Aevm2_mautoimmune extremity vasculitis in MRL mice 2 (mouse)Not determined5101863832135864028Mouse
14746986Manh58_mmandible shape 58 (mouse)5102446283136446283Mouse
11532736Sluc33b_msusceptibility to lung cancer 33b (mouse)5102945037136945196Mouse
11528550Sluc33_msusceptibility to lung cancer 33 (mouse)5104386871120711986Mouse
10412202Bbaa26_mB.burgdorferi-associated arthritis 26 (mouse)Not determined5104583688138555455Mouse
10412239Alpq7_malcohol preference QTL 7 (mouse)Not determined5104705939138705939Mouse
10043890Trigq4_mtriglyceride QTL 4 (mouse)Not determined5107906299141906412Mouse
4142473Chlq11_mcirculating hormone level QTL 11 (mouse)Not determined5107906299141906412Mouse
13464243Ahl20_mage related hearing loss, early onset 20 (mouse)5107906299141906412Mouse
4141139Hmtb4_mhemostasis and thrombosis rebleeding time 4 (mouse)Not determined108762509126882944Mouse
10412197Bbaa25_mB.burgdorferi-associated arthritis 25 (mouse)Not determined5109167240143167381Mouse
13464251Ahl21_mage related hearing loss, early onset 21 (mouse)5109167240143167381Mouse
1301543Hypch_mhypercholesterolemia (mouse)Not determined5109238624139118905Mouse
1300913Bwefm_mbody weight females and males day 10 (mouse)Not determined5109439348143439459Mouse
4141652Mrdq2_mmodifier of retinal degeneration QTL 2 (mouse)Not determined110253106118093673Mouse
1301102Cia14_mcollagen induced arthritis 14 (mouse)Not determined5113320385138555455Mouse
1357662Lprq4_mlipoprotein QTL 4 (mouse)Not determined5114021753129632606Mouse
1301226Bbaa2_mB.burgdorferi-associated arthritis 2 (mouse)Not determined5115156883149157015Mouse
1300827Cora1_mcorrelation in cytokine production 1 (mouse)Not determined5115156883149157015Mouse

Markers in Region
D5Mit187  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm385115,863,998 - 115,864,139UniSTSGRCm38
MGSCv375116,314,007 - 116,314,148UniSTSGRCm37
Celera5112,964,867 - 112,965,008UniSTS
Cytogenetic Map5FUniSTS
cM Map563.0UniSTS
Whitehead Genetic549.2UniSTS
Whitehead/MRC_RH51416.7UniSTS
Whitehead_YAC5 UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_007708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530130 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530131 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530132 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530133 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530134 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530135 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530136 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530137 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530138 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530140 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530142 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530143 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530145 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530146 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530147 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530149 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530150 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530151 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530152 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530153 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248163 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017320641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017320643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017320644 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017320645 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017320646 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254099 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254100 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164764 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164765 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164766 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164767 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164768 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164769 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC115795 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC162461 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF070066 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF086823 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF086824 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK047757 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK047894 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK048090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK132200 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK145037 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC023775 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC031156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC051165 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CAAA01049877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF744826 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U39904 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000051704   ⟹   ENSMUSP00000062049
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5115,983,703 - 116,147,006 (+)Ensembl
GRCm38.p6 Ensembl5115,845,644 - 116,008,947 (+)Ensembl
RefSeq Acc Id: ENSMUST00000102560   ⟹   ENSMUSP00000099620
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5115,984,430 - 116,144,387 (+)Ensembl
GRCm38.p6 Ensembl5115,846,371 - 116,006,328 (+)Ensembl
RefSeq Acc Id: ENSMUST00000112008   ⟹   ENSMUSP00000107639
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5115,984,430 - 116,144,387 (+)Ensembl
GRCm38.p6 Ensembl5115,846,371 - 116,006,328 (+)Ensembl
RefSeq Acc Id: ENSMUST00000122877
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5116,083,356 - 116,136,557 (+)Ensembl
GRCm38.p6 Ensembl5115,945,297 - 115,998,498 (+)Ensembl
RefSeq Acc Id: ENSMUST00000123736   ⟹   ENSMUSP00000134875
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5116,106,084 - 116,144,424 (+)Ensembl
GRCm38.p6 Ensembl5115,968,025 - 116,006,365 (+)Ensembl
RefSeq Acc Id: ENSMUST00000127976
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5115,989,037 - 116,001,085 (+)Ensembl
GRCm38.p6 Ensembl5115,850,978 - 115,863,026 (+)Ensembl
RefSeq Acc Id: ENSMUST00000128702
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5116,045,529 - 116,063,659 (+)Ensembl
GRCm38.p6 Ensembl5115,907,470 - 115,925,600 (+)Ensembl
RefSeq Acc Id: ENSMUST00000134609
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5116,125,233 - 116,128,849 (+)Ensembl
GRCm38.p6 Ensembl5115,987,174 - 115,990,790 (+)Ensembl
RefSeq Acc Id: ENSMUST00000136780
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5116,089,149 - 116,090,708 (+)Ensembl
GRCm38.p6 Ensembl5115,951,090 - 115,952,649 (+)Ensembl
RefSeq Acc Id: ENSMUST00000137952   ⟹   ENSMUSP00000122745
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5115,983,339 - 116,011,919 (+)Ensembl
GRCm38.p6 Ensembl5115,845,280 - 115,873,860 (+)Ensembl
RefSeq Acc Id: ENSMUST00000139881
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5116,071,704 - 116,084,991 (+)Ensembl
GRCm38.p6 Ensembl5115,933,645 - 115,946,932 (+)Ensembl
RefSeq Acc Id: ENSMUST00000141101   ⟹   ENSMUSP00000115802
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5115,983,703 - 116,144,412 (+)Ensembl
GRCm38.p6 Ensembl5115,845,644 - 116,006,353 (+)Ensembl
RefSeq Acc Id: ENSMUST00000145363
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5116,063,700 - 116,144,853 (+)Ensembl
GRCm38.p6 Ensembl5115,925,641 - 116,006,794 (+)Ensembl
RefSeq Acc Id: ENSMUST00000146387
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5115,983,703 - 116,063,768 (+)Ensembl
GRCm38.p6 Ensembl5115,845,644 - 115,925,709 (+)Ensembl
RefSeq Acc Id: ENSMUST00000147330
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5115,983,337 - 116,063,761 (+)Ensembl
GRCm38.p6 Ensembl5115,845,278 - 115,925,702 (+)Ensembl
RefSeq Acc Id: ENSMUST00000147479
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5116,064,145 - 116,144,427 (+)Ensembl
GRCm38.p6 Ensembl5115,926,086 - 116,006,368 (+)Ensembl
RefSeq Acc Id: ENSMUST00000148245   ⟹   ENSMUSP00000119769
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5115,983,340 - 116,011,937 (+)Ensembl
GRCm38.p6 Ensembl5115,845,281 - 115,873,878 (+)Ensembl
RefSeq Acc Id: ENSMUST00000153407
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5115,984,520 - 115,992,744 (+)Ensembl
GRCm38.p6 Ensembl5115,846,461 - 115,854,685 (+)Ensembl
RefSeq Acc Id: ENSMUST00000202734
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5116,024,477 - 116,025,660 (+)Ensembl
GRCm38.p6 Ensembl5115,886,418 - 115,887,601 (+)Ensembl
RefSeq Acc Id: NM_007708   ⟹   NP_031734
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395115,983,715 - 116,144,402 (+)NCBI
GRCm385115,845,656 - 116,006,343 (+)NCBI
MGSCv375116,295,665 - 116,456,352 (+)RGD
Celera5112,946,512 - 113,107,010 (+)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006530130   ⟹   XP_006530193
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395115,983,292 - 116,147,012 (+)NCBI
GRCm385115,845,232 - 116,008,953 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530131   ⟹   XP_006530194
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395115,983,284 - 116,147,012 (+)NCBI
GRCm385115,845,224 - 116,008,953 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530132   ⟹   XP_006530195
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395115,983,350 - 116,147,012 (+)NCBI
GRCm385115,845,287 - 116,008,953 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530133   ⟹   XP_006530196
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395115,983,293 - 116,147,012 (+)NCBI
GRCm385115,845,234 - 116,008,953 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530134   ⟹   XP_006530197
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395115,983,292 - 116,147,012 (+)NCBI
GRCm385115,845,232 - 116,008,953 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530135   ⟹   XP_006530198
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395115,983,292 - 116,147,012 (+)NCBI
GRCm385115,845,232 - 116,008,953 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530136   ⟹   XP_006530199
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395115,983,292 - 116,147,012 (+)NCBI
GRCm385115,845,232 - 116,008,953 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530137   ⟹   XP_006530200
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395115,983,292 - 116,147,012 (+)NCBI
GRCm385115,845,232 - 116,008,953 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530138   ⟹   XP_006530201
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395115,983,292 - 116,147,012 (+)NCBI
GRCm385115,845,232 - 116,008,953 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530139   ⟹   XP_006530202
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395115,983,292 - 116,147,012 (+)NCBI
GRCm385115,845,232 - 116,008,953 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530140   ⟹   XP_006530203
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395115,983,292 - 116,147,012 (+)NCBI
GRCm385115,845,233 - 116,008,953 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530141   ⟹   XP_006530204
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395115,983,292 - 116,147,012 (+)NCBI
GRCm385115,845,233 - 116,008,953 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530142   ⟹   XP_006530205
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395115,983,292 - 116,143,919 (+)NCBI
GRCm385115,845,232 - 116,005,860 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530143   ⟹   XP_006530206
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395115,983,292 - 116,147,012 (+)NCBI
GRCm385115,845,233 - 116,008,953 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530145   ⟹   XP_006530208
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395115,983,292 - 116,147,012 (+)NCBI
GRCm385115,845,233 - 116,008,953 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530146   ⟹   XP_006530209
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395115,983,290 - 116,128,380 (+)NCBI
GRCm385115,845,230 - 115,990,321 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530147   ⟹   XP_006530210
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395116,045,806 - 116,146,645 (+)NCBI
GRCm385115,907,747 - 116,008,586 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530149   ⟹   XP_006530212
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395116,045,294 - 116,146,645 (+)NCBI
GRCm385115,907,747 - 116,008,586 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530150   ⟹   XP_006530213
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395116,045,294 - 116,146,645 (+)NCBI
GRCm385115,907,747 - 116,008,586 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530151   ⟹   XP_006530214
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395116,045,294 - 116,146,645 (+)NCBI
GRCm385115,907,747 - 116,008,586 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530152   ⟹   XP_006530215
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395116,083,363 - 116,147,012 (+)NCBI
GRCm385115,945,304 - 116,008,953 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530153   ⟹   XP_006530216
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395116,083,363 - 116,136,562 (+)NCBI
GRCm385115,945,304 - 115,998,503 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011248163   ⟹   XP_011246465
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395115,983,292 - 116,147,012 (+)NCBI
GRCm385115,845,233 - 116,008,953 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017320641   ⟹   XP_017176130
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395116,045,294 - 116,146,645 (+)NCBI
GRCm385115,907,747 - 116,008,586 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017320643   ⟹   XP_017176132
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395116,045,294 - 116,146,645 (+)NCBI
GRCm385115,907,747 - 116,008,586 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017320644   ⟹   XP_017176133
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395116,045,294 - 116,146,645 (+)NCBI
GRCm385115,907,747 - 116,008,586 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017320645   ⟹   XP_017176134
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395116,045,294 - 116,146,645 (+)NCBI
GRCm385115,907,747 - 116,008,586 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017320646   ⟹   XP_017176135
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395116,045,294 - 116,146,645 (+)NCBI
GRCm385115,907,747 - 116,008,586 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030254098   ⟹   XP_030109958
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395115,983,292 - 116,147,012 (+)NCBI
GRCm385115,845,233 - 116,008,953 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030254099   ⟹   XP_030109959
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395115,983,284 - 116,147,012 (+)NCBI
GRCm385115,845,224 - 116,008,953 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030254100   ⟹   XP_030109960
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395115,983,292 - 116,147,012 (+)NCBI
GRCm385115,845,232 - 116,008,953 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036164764   ⟹   XP_036020657
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395115,983,292 - 116,147,012 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036164765   ⟹   XP_036020658
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395115,983,290 - 116,128,380 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036164766   ⟹   XP_036020659
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395115,983,293 - 116,147,012 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036164767   ⟹   XP_036020660
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395116,045,806 - 116,146,645 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036164768   ⟹   XP_036020661
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395116,045,294 - 116,146,645 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036164769   ⟹   XP_036020662
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395116,045,294 - 116,146,645 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_031734 (Get FASTA)   NCBI Sequence Viewer  
  XP_006530193 (Get FASTA)   NCBI Sequence Viewer  
  XP_006530194 (Get FASTA)   NCBI Sequence Viewer  
  XP_006530195 (Get FASTA)   NCBI Sequence Viewer  
  XP_006530196 (Get FASTA)   NCBI Sequence Viewer  
  XP_006530197 (Get FASTA)   NCBI Sequence Viewer  
  XP_006530198 (Get FASTA)   NCBI Sequence Viewer  
  XP_006530199 (Get FASTA)   NCBI Sequence Viewer  
  XP_006530200 (Get FASTA)   NCBI Sequence Viewer  
  XP_006530201 (Get FASTA)   NCBI Sequence Viewer  
  XP_006530202 (Get FASTA)   NCBI Sequence Viewer  
  XP_006530203 (Get FASTA)   NCBI Sequence Viewer  
  XP_006530204 (Get FASTA)   NCBI Sequence Viewer  
  XP_006530205 (Get FASTA)   NCBI Sequence Viewer  
  XP_006530206 (Get FASTA)   NCBI Sequence Viewer  
  XP_006530208 (Get FASTA)   NCBI Sequence Viewer  
  XP_006530209 (Get FASTA)   NCBI Sequence Viewer  
  XP_006530210 (Get FASTA)   NCBI Sequence Viewer  
  XP_006530212 (Get FASTA)   NCBI Sequence Viewer  
  XP_006530213 (Get FASTA)   NCBI Sequence Viewer  
  XP_006530214 (Get FASTA)   NCBI Sequence Viewer  
  XP_006530215 (Get FASTA)   NCBI Sequence Viewer  
  XP_006530216 (Get FASTA)   NCBI Sequence Viewer  
  XP_011246465 (Get FASTA)   NCBI Sequence Viewer  
  XP_017176130 (Get FASTA)   NCBI Sequence Viewer  
  XP_017176132 (Get FASTA)   NCBI Sequence Viewer  
  XP_017176133 (Get FASTA)   NCBI Sequence Viewer  
  XP_017176134 (Get FASTA)   NCBI Sequence Viewer  
  XP_017176135 (Get FASTA)   NCBI Sequence Viewer  
  XP_030109958 (Get FASTA)   NCBI Sequence Viewer  
  XP_030109959 (Get FASTA)   NCBI Sequence Viewer  
  XP_030109960 (Get FASTA)   NCBI Sequence Viewer  
  XP_036020657 (Get FASTA)   NCBI Sequence Viewer  
  XP_036020658 (Get FASTA)   NCBI Sequence Viewer  
  XP_036020659 (Get FASTA)   NCBI Sequence Viewer  
  XP_036020660 (Get FASTA)   NCBI Sequence Viewer  
  XP_036020661 (Get FASTA)   NCBI Sequence Viewer  
  XP_036020662 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAC27933 (Get FASTA)   NCBI Sequence Viewer  
  AAC52341 (Get FASTA)   NCBI Sequence Viewer  
  AAC72822 (Get FASTA)   NCBI Sequence Viewer  
  AAC72823 (Get FASTA)   NCBI Sequence Viewer  
  AAH23775 (Get FASTA)   NCBI Sequence Viewer  
  AAH51165 (Get FASTA)   NCBI Sequence Viewer  
  BAE26199 (Get FASTA)   NCBI Sequence Viewer  
  EDL19839 (Get FASTA)   NCBI Sequence Viewer  
  EDL19840 (Get FASTA)   NCBI Sequence Viewer  
  EDL19841 (Get FASTA)   NCBI Sequence Viewer  
  EDL19842 (Get FASTA)   NCBI Sequence Viewer  
  P49025 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_031734   ⟸   NM_007708
- UniProtKB: E9QL53 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006530194   ⟸   XM_006530131
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006530209   ⟸   XM_006530146
- Peptide Label: isoform X17
- Sequence:
RefSeq Acc Id: XP_006530193   ⟸   XM_006530130
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006530197   ⟸   XM_006530134
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006530200   ⟸   XM_006530137
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_006530199   ⟸   XM_006530136
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_006530198   ⟸   XM_006530135
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006530202   ⟸   XM_006530139
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_006530201   ⟸   XM_006530138
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_006530203   ⟸   XM_006530140
- Peptide Label: isoform X11
- UniProtKB: D3YU89 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006530204   ⟸   XM_006530141
- Peptide Label: isoform X12
- UniProtKB: E9QL53 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006530206   ⟸   XM_006530143
- Peptide Label: isoform X14
- UniProtKB: D3Z1U0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006530208   ⟸   XM_006530145
- Peptide Label: isoform X15
- UniProtKB: F6SBR5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006530205   ⟸   XM_006530142
- Peptide Label: isoform X13
- Sequence:
RefSeq Acc Id: XP_006530196   ⟸   XM_006530133
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006530195   ⟸   XM_006530132
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006530210   ⟸   XM_006530147
- Peptide Label: isoform X19
- Sequence:
RefSeq Acc Id: XP_006530213   ⟸   XM_006530150
- Peptide Label: isoform X22
- Sequence:
RefSeq Acc Id: XP_006530212   ⟸   XM_006530149
- Peptide Label: isoform X21
- Sequence:
RefSeq Acc Id: XP_006530214   ⟸   XM_006530151
- Peptide Label: isoform X30
- UniProtKB: P49025 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006530215   ⟸   XM_006530152
- Peptide Label: isoform X31
- Sequence:
RefSeq Acc Id: XP_006530216   ⟸   XM_006530153
- Peptide Label: isoform X32
- Sequence:
RefSeq Acc Id: XP_011246465   ⟸   XM_011248163
- Peptide Label: isoform X16
- Sequence:
RefSeq Acc Id: XP_017176133   ⟸   XM_017320644
- Peptide Label: isoform X26
- Sequence:
RefSeq Acc Id: XP_017176134   ⟸   XM_017320645
- Peptide Label: isoform X27
- Sequence:
RefSeq Acc Id: XP_017176130   ⟸   XM_017320641
- Peptide Label: isoform X23
- Sequence:
RefSeq Acc Id: XP_017176132   ⟸   XM_017320643
- Peptide Label: isoform X25
- Sequence:
RefSeq Acc Id: XP_017176135   ⟸   XM_017320646
- Peptide Label: isoform X28
- Sequence:
RefSeq Acc Id: XP_030109959   ⟸   XM_030254099
- Peptide Label: isoform X8
RefSeq Acc Id: XP_030109960   ⟸   XM_030254100
- Peptide Label: isoform X9
RefSeq Acc Id: XP_030109958   ⟸   XM_030254098
- Peptide Label: isoform X7
RefSeq Acc Id: ENSMUSP00000062049   ⟸   ENSMUST00000051704
RefSeq Acc Id: ENSMUSP00000107639   ⟸   ENSMUST00000112008
RefSeq Acc Id: ENSMUSP00000119769   ⟸   ENSMUST00000148245
RefSeq Acc Id: ENSMUSP00000122745   ⟸   ENSMUST00000137952
RefSeq Acc Id: ENSMUSP00000134875   ⟸   ENSMUST00000123736
RefSeq Acc Id: ENSMUSP00000099620   ⟸   ENSMUST00000102560
RefSeq Acc Id: ENSMUSP00000115802   ⟸   ENSMUST00000141101
RefSeq Acc Id: XP_036020658   ⟸   XM_036164765
- Peptide Label: isoform X18
RefSeq Acc Id: XP_036020657   ⟸   XM_036164764
- Peptide Label: isoform X6
RefSeq Acc Id: XP_036020659   ⟸   XM_036164766
- Peptide Label: isoform X19
RefSeq Acc Id: XP_036020661   ⟸   XM_036164768
- Peptide Label: isoform X24
RefSeq Acc Id: XP_036020662   ⟸   XM_036164769
- Peptide Label: isoform X29
RefSeq Acc Id: XP_036020660   ⟸   XM_036164767
- Peptide Label: isoform X20
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P49025-F1-model_v2 AlphaFold P49025 1-2055 view protein structure

Promoters
RGD ID:6887774
Promoter ID:EPDNEW_M7338
Type:multiple initiation site
Name:Cit_1
Description:Mus musculus citron , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M7339  EPDNEW_M7340  EPDNEW_M7341  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm385115,845,272 - 115,845,332EPDNEW
RGD ID:6887776
Promoter ID:EPDNEW_M7339
Type:initiation region
Name:Cit_3
Description:Mus musculus citron , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M7338  EPDNEW_M7340  EPDNEW_M7341  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm385115,908,734 - 115,908,794EPDNEW
RGD ID:6887778
Promoter ID:EPDNEW_M7340
Type:single initiation site
Name:Cit_4
Description:Mus musculus citron , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M7338  EPDNEW_M7339  EPDNEW_M7341  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm385115,924,495 - 115,924,555EPDNEW
RGD ID:6887780
Promoter ID:EPDNEW_M7341
Type:multiple initiation site
Name:Cit_2
Description:Mus musculus citron , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M7338  EPDNEW_M7339  EPDNEW_M7340  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm385115,945,328 - 115,945,388EPDNEW
RGD ID:6837256
Promoter ID:MM_KWN:43698
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   ES_Cell
Transcripts:ENSMUST00000102560,   ENSMUST00000112008,   ENSMUST00000112011,   ENSMUST00000112014,   OTTMUST00000034905,   OTTMUST00000034910,   OTTMUST00000034913,   OTTMUST00000034914,   OTTMUST00000034916,   UC008ZEP.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365116,294,896 - 116,295,396 (+)MPROMDB
RGD ID:6837255
Promoter ID:MM_KWN:43700
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:OTTMUST00000034917
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365116,357,321 - 116,357,821 (+)MPROMDB
RGD ID:6837258
Promoter ID:MM_KWN:43701
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:UC008ZES.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365116,358,621 - 116,359,121 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:105313 AgrOrtholog
Ensembl Genes ENSMUSG00000029516 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000062049 ENTREZGENE
  ENSMUSP00000062049.9 UniProtKB/TrEMBL
  ENSMUSP00000099620 ENTREZGENE
  ENSMUSP00000099620.4 UniProtKB/TrEMBL
  ENSMUSP00000107639 ENTREZGENE
  ENSMUSP00000107639.3 UniProtKB/TrEMBL
  ENSMUSP00000115802 ENTREZGENE
  ENSMUSP00000115802.3 UniProtKB/TrEMBL
  ENSMUSP00000119769.2 UniProtKB/TrEMBL
  ENSMUSP00000122745.2 UniProtKB/TrEMBL
  ENSMUSP00000134875.2 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000051704 ENTREZGENE
  ENSMUST00000051704.15 UniProtKB/TrEMBL
  ENSMUST00000102560 ENTREZGENE
  ENSMUST00000102560.7 UniProtKB/TrEMBL
  ENSMUST00000112008 ENTREZGENE
  ENSMUST00000112008.9 UniProtKB/TrEMBL
  ENSMUST00000122877 ENTREZGENE
  ENSMUST00000123736.2 UniProtKB/TrEMBL
  ENSMUST00000137952.8 UniProtKB/TrEMBL
  ENSMUST00000141101 ENTREZGENE
  ENSMUST00000141101.5 UniProtKB/TrEMBL
  ENSMUST00000148245.8 UniProtKB/TrEMBL
Gene3D-CATH 2.30.29.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro AGC-kinase_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  C1-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Citron_Rho-interacting_kinase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CNH_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CRIK_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PE/DAG-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:12704 UniProtKB/TrEMBL
MGD MGI:105313 ENTREZGENE
NCBI Gene 12704 ENTREZGENE
PANTHER PTHR22988:SF26 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam CNH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PF00169 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pkinase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Cit PhenoGen
PIRSF Citron_Rho-interacting_kinase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE AGC_KINASE_CTER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CNH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH_DOMAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_ATP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZF_DAG_PE_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZF_DAG_PE_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART CNH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  S_TK_X UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  S_TKc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00109 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00233 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF56112 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF57889 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt CTRO_MOUSE UniProtKB/Swiss-Prot
  D3YU89 ENTREZGENE, UniProtKB/TrEMBL
  D3Z1K6_MOUSE UniProtKB/TrEMBL
  D3Z1U0 ENTREZGENE, UniProtKB/TrEMBL
  D3Z477_MOUSE UniProtKB/TrEMBL
  E9QL53 ENTREZGENE, UniProtKB/TrEMBL
  F6SBR5 ENTREZGENE, UniProtKB/TrEMBL
  H3BJ74_MOUSE UniProtKB/TrEMBL
  P49025 ENTREZGENE
UniProt Secondary O88528 UniProtKB/Swiss-Prot
  O88937 UniProtKB/Swiss-Prot
  O88938 UniProtKB/Swiss-Prot
  Q3UM99 UniProtKB/Swiss-Prot
  Q8CIJ1 UniProtKB/Swiss-Prot