CD79B (CD79b molecule) - Rat Genome Database

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Gene: CD79B (CD79b molecule) Homo sapiens
Analyze
Symbol: CD79B
Name: CD79b molecule
RGD ID: 730908
HGNC Page HGNC:1699
Description: Enables identical protein binding activity. Predicted to be involved in B cell differentiation and B cell receptor signaling pathway. Predicted to act upstream of or within response to bacterium. Located in extracellular exosome. Part of IgM B cell receptor complex. Implicated in agammaglobulinemia 6 and lymphoma (multiple). Biomarker of acute lymphoblastic leukemia; chronic lymphocytic leukemia; mantle cell lymphoma; and splenic marginal zone lymphoma.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: AGM6; B-cell antigen receptor complex-associated protein beta chain; B-cell-specific glycoprotein B29; B29; CD79b antigen (immunoglobulin-associated beta); CD79b molecule, immunoglobulin-associated beta; Ig-beta; IGB; Igbeta; immunoglobulin-associated B29 protein
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381763,928,740 - 63,932,331 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1763,928,738 - 63,932,336 (-)EnsemblGRCh38hg38GRCh38
GRCh371762,006,100 - 62,009,691 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361759,359,830 - 59,363,436 (-)NCBINCBI36Build 36hg18NCBI36
Build 341759,359,831 - 59,363,446NCBI
Celera1756,394,160 - 56,397,766 (-)NCBICelera
Cytogenetic Map17q23.3NCBI
HuRef1757,373,817 - 57,377,419 (-)NCBIHuRef
CHM1_11762,070,017 - 62,073,623 (-)NCBICHM1_1
T2T-CHM13v2.01764,799,505 - 64,803,094 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. An alternatively spliced form of CD79b gene may account for altered B-cell receptor expression in B-chronic lymphocytic leukemia. Alfarano A, etal., Blood. 1999 Apr 1;93(7):2327-35.
2. Quantitative analysis of CD79b, CD5 and CD19 in mature B-cell lymphoproliferative disorders. Cabezudo E, etal., Haematologica. 1999 May;84(5):413-8.
3. Patients with primary breast and primary female genital tract diffuse large B cell lymphoma have a high frequency of MYD88 and CD79B mutations. Cao XX, etal., Ann Hematol. 2017 Nov;96(11):1867-1871. doi: 10.1007/s00277-017-3094-7. Epub 2017 Aug 12.
4. Morphologic Patterns and the Correlation With MYD88 L265P, CD79B Mutations in Primary Adrenal Diffuse Large B-Cell Lymphoma. Chen Z, etal., Am J Surg Pathol. 2020 Apr;44(4):444-455. doi: 10.1097/PAS.0000000000001386.
5. New markers for minimal residual disease detection in acute lymphoblastic leukemia. Coustan-Smith E, etal., Blood. 2011 Jun 9;117(23):6267-76. doi: 10.1182/blood-2010-12-324004. Epub 2011 Apr 12.
6. Therapeutic potential of an anti-CD79b antibody-drug conjugate, anti-CD79b-vc-MMAE, for the treatment of non-Hodgkin lymphoma. Dornan D, etal., Blood. 2009 Sep 24;114(13):2721-9. doi: 10.1182/blood-2009-02-205500. Epub 2009 Jul 24.
7. CD79b expression in B cell chronic lymphocytic leukemia: its implication for minimal residual disease detection. Garcia Vela J, etal., Leukemia. 1999 Oct;13(10):1501-5. doi: 10.1038/sj.leu.2401511.
8. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
9. Ibrutinib Unmasks Critical Role of Bruton Tyrosine Kinase in Primary CNS Lymphoma. Grommes C, etal., Cancer Discov. 2017 Sep;7(9):1018-1029. doi: 10.1158/2159-8290.CD-17-0613. Epub 2017 Jun 15.
10. Physical linkage of the B29/Ig-beta (CD79B) gene to the skeletal muscle, sodium-channel, and growth hormone genes in rat and human. Nakazato S, etal., Genomics 1998 Mar 15;48(3):363-8.
11. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
12. Analysis of the B-cell receptor B29 (CD79b) gene in familial chronic lymphocytic leukemia. Payelle-Brogard B, etal., Blood. 1999 Nov 15;94(10):3516-22.
13. Anti-CD22 and anti-CD79B antibody drug conjugates are active in different molecular diffuse large B-cell lymphoma subtypes. Pfeifer M, etal., Leukemia. 2015 Jul;29(7):1578-86. doi: 10.1038/leu.2015.48. Epub 2015 Feb 24.
14. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
15. Antibody-drug conjugates targeted to CD79 for the treatment of non-Hodgkin lymphoma. Polson AG, etal., Blood. 2007 Jul 15;110(2):616-23. doi: 10.1182/blood-2007-01-066704. Epub 2007 Mar 20.
16. Expression of Ig-beta (CD79b) by chronic lymphocytic leukemia B cells that lack immunoglobulin heavy-chain allelic exclusion. Rassenti LZ and Kipps TJ, Blood. 2000 Apr 15;95(8):2725-7.
17. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
18. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
19. RGD HPO Phenotype Annotation Pipeline RGD automated import pipeline for human HPO-to-gene-to-disease annotations
20. Aberrations of the B-cell receptor B29 (CD79b) gene in chronic lymphocytic leukemia. Thompson AA, etal., Blood. 1997 Aug 15;90(4):1387-94.
21. Primary diffuse large B-cell lymphomas of central nervous system exhibit remarkably high prevalence of oncogenic MYD88 and CD79B mutations. Yamada S, etal., Leuk Lymphoma. 2015 Jul;56(7):2141-5. doi: 10.3109/10428194.2014.979413. Epub 2015 Jan 14.
Additional References at PubMed
PMID:1534761   PMID:1591006   PMID:7500027   PMID:7512031   PMID:7514267   PMID:7516335   PMID:7538118   PMID:7539038   PMID:7541024   PMID:7592958   PMID:7643857   PMID:7913081  
PMID:8077654   PMID:8125298   PMID:8419481   PMID:8486355   PMID:8555489   PMID:8656670   PMID:8747711   PMID:9120258   PMID:9418137   PMID:9521881   PMID:9531288   PMID:10808179  
PMID:11389892   PMID:11907094   PMID:12384401   PMID:12393534   PMID:12453414   PMID:12477932   PMID:12482395   PMID:12651942   PMID:12886015   PMID:14967045   PMID:15489334   PMID:15661909  
PMID:16847312   PMID:17315213   PMID:17701175   PMID:17709424   PMID:17878339   PMID:18029348   PMID:18978465   PMID:19322201   PMID:19573080   PMID:19773279   PMID:19913121   PMID:20237496  
PMID:20458337   PMID:20568250   PMID:20628086   PMID:20881960   PMID:21324920   PMID:21355953   PMID:21873635   PMID:22808296   PMID:23361872   PMID:23649625   PMID:24253023   PMID:24444466  
PMID:24769851   PMID:25414443   PMID:25416956   PMID:25501023   PMID:25910212   PMID:26111727   PMID:26699656   PMID:26752547   PMID:27010137   PMID:28514442   PMID:28856744   PMID:28868954  
PMID:29514783   PMID:29734251   PMID:30196744   PMID:30390359   PMID:32056332   PMID:32296183   PMID:33733381   PMID:33961781   PMID:34706861   PMID:35256949   PMID:35981043   PMID:36182550  
PMID:36426942   PMID:36478416   PMID:36949194  


Genomics

Comparative Map Data
CD79B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381763,928,740 - 63,932,331 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1763,928,738 - 63,932,336 (-)EnsemblGRCh38hg38GRCh38
GRCh371762,006,100 - 62,009,691 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361759,359,830 - 59,363,436 (-)NCBINCBI36Build 36hg18NCBI36
Build 341759,359,831 - 59,363,446NCBI
Celera1756,394,160 - 56,397,766 (-)NCBICelera
Cytogenetic Map17q23.3NCBI
HuRef1757,373,817 - 57,377,419 (-)NCBIHuRef
CHM1_11762,070,017 - 62,073,623 (-)NCBICHM1_1
T2T-CHM13v2.01764,799,505 - 64,803,094 (-)NCBIT2T-CHM13v2.0
Cd79b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911106,202,167 - 106,205,388 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11106,202,167 - 106,205,588 (-)EnsemblGRCm39 Ensembl
GRCm3811106,311,341 - 106,314,562 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11106,311,341 - 106,314,762 (-)EnsemblGRCm38mm10GRCm38
MGSCv3711106,172,655 - 106,175,843 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3611106,127,431 - 106,130,760 (-)NCBIMGSCv36mm8
Celera11118,042,026 - 118,045,214 (-)NCBICelera
Cytogenetic Map11E1NCBI
cM Map1168.89NCBI
Cd79b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81091,739,134 - 91,742,312 (-)NCBIGRCr8
mRatBN7.21091,239,354 - 91,242,500 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1091,239,356 - 91,242,625 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1096,293,979 - 96,297,125 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01095,757,144 - 95,760,290 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01091,167,742 - 91,170,888 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01094,497,445 - 94,500,591 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1094,497,448 - 94,500,591 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01094,248,655 - 94,251,801 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41095,703,129 - 95,706,275 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11095,717,499 - 95,720,645 (-)NCBI
Celera1089,914,837 - 89,917,983 (-)NCBICelera
Cytogenetic Map10q32.1NCBI
Cd79b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554787,909,153 - 7,913,166 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554787,909,353 - 7,912,814 (+)NCBIChiLan1.0ChiLan1.0
CD79B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21980,111,641 - 80,115,624 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11784,931,947 - 84,935,931 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01758,022,375 - 58,026,359 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11763,116,722 - 63,120,335 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1763,116,722 - 63,120,335 (-)Ensemblpanpan1.1panPan2
CD79B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1911,834,230 - 11,844,946 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl911,842,190 - 11,844,843 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha912,801,263 - 12,804,585 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0913,502,931 - 13,506,253 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl913,502,935 - 13,506,208 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1912,449,684 - 12,453,001 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0915,079,310 - 15,082,632 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0915,081,786 - 15,085,109 (+)NCBIUU_Cfam_GSD_1.0
Cd79b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560214,657,115 - 14,660,367 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365414,534,246 - 4,537,590 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365414,534,233 - 4,537,448 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CD79B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1215,053,007 - 15,056,438 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11215,052,966 - 15,056,441 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21215,044,369 - 15,047,831 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CD79B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11657,339,492 - 57,343,085 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1657,339,457 - 57,343,358 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607727,952,012 - 27,955,604 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cd79b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248491,429,912 - 1,432,955 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248491,429,446 - 1,432,835 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in CD79B
158 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
NM_000626.4(CD79B):c.312C>T (p.Leu104=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV000548339] Chr17:63930192 [GRCh38]
Chr17:62007552 [GRCh37]
Chr17:17q23.3
benign
NM_000626.4(CD79B):c.409G>A (p.Gly137Ser) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV000015925] Chr17:63930095 [GRCh38]
Chr17:62007455 [GRCh37]
Chr17:17q23.3
pathogenic
NM_000626.4(CD79B):c.238C>T (p.Gln80Ter) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV000015926] Chr17:63930266 [GRCh38]
Chr17:62007626 [GRCh37]
Chr17:17q23.3
pathogenic
GRCh38/hg38 17q21.33-24.2(chr17:36449220-68170214)x3 copy number gain See cases [RCV000050957] Chr17:36449220..68170214 [GRCh38]
Chr17:48563237..65936105 [GRCh37]
Chr17:45918236..63677950 [NCBI36]
Chr17:17q21.33-24.2
pathogenic
GRCh38/hg38 17q23.2-25.3(chr17:36449220-83086677)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052483]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052483]|See cases [RCV000052483] Chr17:36449220..83086677 [GRCh38]
Chr17:58617905..81044553 [GRCh37]
Chr17:55972687..78637842 [NCBI36]
Chr17:17q23.2-25.3
pathogenic
GRCh37/hg19 17q23-24(chr17:59209629-64222315)x3 copy number gain See cases [RCV000052485] Chr17:59209629..64222315 [GRCh37]
Chr17:56564411..61652777 [NCBI36]
Chr17:17q23-24
pathogenic
NM_000626.4(CD79B):c.218A>C (p.Asn73Thr) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV000792433]|not specified [RCV000120490] Chr17:63930286 [GRCh38]
Chr17:62007646 [GRCh37]
Chr17:17q23.3
uncertain significance|not provided
NM_000626.4(CD79B):c.179C>T (p.Thr60Met) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002517579]|not provided [RCV001508823]|not specified [RCV000120491] Chr17:63930325 [GRCh38]
Chr17:62007685 [GRCh37]
Chr17:17q23.3
uncertain significance|not provided
NM_000626.4(CD79B):c.497C>T (p.Thr166Met) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001854606]|not specified [RCV000120492] Chr17:63929822 [GRCh38]
Chr17:62007182 [GRCh37]
Chr17:17q23.3
uncertain significance|not provided
GRCh38/hg38 17q23.1-25.1(chr17:36449220-75053130)x3 copy number gain See cases [RCV000137437] Chr17:36449220..75053130 [GRCh38]
Chr17:57595736..73049225 [GRCh37]
Chr17:54950518..70560820 [NCBI36]
Chr17:17q23.1-25.1
pathogenic
GRCh37/hg19 17q22-23.3(chr17:56321134-62080001)x3 copy number gain See cases [RCV000240364] Chr17:56321134..62080001 [GRCh37]
Chr17:17q22-23.3
pathogenic
NM_000626.4(CD79B):c.68-9A>G single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV000526743] Chr17:63931394 [GRCh38]
Chr17:62008754 [GRCh37]
Chr17:17q23.3
likely benign
GRCh37/hg19 17q21.31-25.3(chr17:42580684-81085615)x3 copy number gain See cases [RCV000447823] Chr17:42580684..81085615 [GRCh37]
Chr17:17q21.31-25.3
pathogenic
NM_000626.4(CD79B):c.366T>C (p.Cys122=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001523215]|not provided [RCV001643145]|not specified [RCV000454896] Chr17:63930138 [GRCh38]
Chr17:62007498 [GRCh37]
Chr17:17q23.3
benign
GRCh37/hg19 17p13.3-q25.3(chr17:526-81041938) copy number gain See cases [RCV000511439] Chr17:526..81041938 [GRCh37]
Chr17:17p13.3-q25.3
pathogenic
NM_000626.4(CD79B):c.90A>G (p.Arg30=) single nucleotide variant not specified [RCV000608039] Chr17:63931363 [GRCh38]
Chr17:62008723 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.381C>T (p.Asn127=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV000648113] Chr17:63930123 [GRCh38]
Chr17:62007483 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.592-6C>G single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV000648112] Chr17:63929330 [GRCh38]
Chr17:62006690 [GRCh37]
Chr17:17q23.3
likely benign|uncertain significance
GRCh37/hg19 17p13.3-q25.3(chr17:526-81041938)x3 copy number gain See cases [RCV000512441] Chr17:526..81041938 [GRCh37]
Chr17:17p13.3-q25.3
pathogenic
NM_000626.4(CD79B):c.414A>G (p.Thr138=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV000768173] Chr17:63930090 [GRCh38]
Chr17:62007450 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.323C>T (p.Thr108Ile) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV000685183] Chr17:63930181 [GRCh38]
Chr17:62007541 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.250G>A (p.Glu84Lys) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV000687195] Chr17:63930254 [GRCh38]
Chr17:62007614 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.422G>A (p.Arg141Gln) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV000695201] Chr17:63930082 [GRCh38]
Chr17:62007442 [GRCh37]
Chr17:17q23.3
uncertain significance
GRCh37/hg19 17p13.3-q25.3(chr17:8547-81060040)x3 copy number gain not provided [RCV000739324] Chr17:8547..81060040 [GRCh37]
Chr17:17p13.3-q25.3
pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:7214-81058310)x3 copy number gain not provided [RCV000739320] Chr17:7214..81058310 [GRCh37]
Chr17:17p13.3-q25.3
pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:12344-81057996)x3 copy number gain not provided [RCV000739325] Chr17:12344..81057996 [GRCh37]
Chr17:17p13.3-q25.3
pathogenic
NM_000626.4(CD79B):c.549+133A>G single nucleotide variant not provided [RCV001693412] Chr17:63929637 [GRCh38]
Chr17:62006997 [GRCh37]
Chr17:17q23.3
benign
NM_000626.4(CD79B):c.15G>A (p.Ala5=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001428278] Chr17:63932247 [GRCh38]
Chr17:62009607 [GRCh37]
Chr17:17q23.3
likely benign
GRCh37/hg19 17q23.2-24.2(chr17:59597348-64886364)x3 copy number gain not provided [RCV000752158] Chr17:59597348..64886364 [GRCh37]
Chr17:17q23.2-24.2
pathogenic
NM_000626.4(CD79B):c.68-220A>C single nucleotide variant not provided [RCV001610207] Chr17:63931605 [GRCh38]
Chr17:62008965 [GRCh37]
Chr17:17q23.3
benign
GRCh37/hg19 17q22-24.2(chr17:57357088-66306668) copy number gain not provided [RCV000767764] Chr17:57357088..66306668 [GRCh37]
Chr17:17q22-24.2
pathogenic
NM_000626.4(CD79B):c.272T>C (p.Leu91Pro) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001051254] Chr17:63930232 [GRCh38]
Chr17:62007592 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.48G>A (p.Ala16=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV000884988]|CD79B-related disorder [RCV003940515] Chr17:63932214 [GRCh38]
Chr17:62009574 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.431-4G>A single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV000918388]|CD79B-related disorder [RCV003933078] Chr17:63929892 [GRCh38]
Chr17:62007252 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.338G>A (p.Arg113Gln) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV000797927]|not specified [RCV004027938] Chr17:63930166 [GRCh38]
Chr17:62007526 [GRCh37]
Chr17:17q23.3
likely benign|uncertain significance
NM_000626.4(CD79B):c.635C>T (p.Thr212Met) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV000796857] Chr17:63929281 [GRCh38]
Chr17:62006641 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.286A>G (p.Met96Val) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV000798503] Chr17:63930218 [GRCh38]
Chr17:62007578 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.303C>T (p.Asn101=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV000919013] Chr17:63930201 [GRCh38]
Chr17:62007561 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.362_366delinsGC (p.Phe121del) indel Agammaglobulinemia 6, autosomal recessive [RCV000818520] Chr17:63930138..63930142 [GRCh38]
Chr17:62007498..62007502 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.208G>A (p.Ala70Thr) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV000795110] Chr17:63930296 [GRCh38]
Chr17:62007656 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.468G>A (p.Thr156=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001454711] Chr17:63929851 [GRCh38]
Chr17:62007211 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.102G>C (p.Arg34=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV000897201] Chr17:63931351 [GRCh38]
Chr17:62008711 [GRCh37]
Chr17:17q23.3
benign
GRCh37/hg19 17q23.1-24.2(chr17:57869604-67078443)x3 copy number gain not provided [RCV000845965] Chr17:57869604..67078443 [GRCh37]
Chr17:17q23.1-24.2
pathogenic
NM_000626.4(CD79B):c.557G>A (p.Ser186Asn) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001216378] Chr17:63929468 [GRCh38]
Chr17:62006828 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.92C>G (p.Ser31Trp) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001243256] Chr17:63931361 [GRCh38]
Chr17:62008721 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.14C>T (p.Ala5Val) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001204451]|not provided [RCV001531442] Chr17:63932248 [GRCh38]
Chr17:62009608 [GRCh37]
Chr17:17q23.3
uncertain significance
NC_000017.11:g.63932631A>G single nucleotide variant not provided [RCV001684032] Chr17:63932631 [GRCh38]
Chr17:62009991 [GRCh37]
Chr17:17q23.3
benign
NM_000626.4(CD79B):c.120T>A (p.Gly40=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001421245] Chr17:63930384 [GRCh38]
Chr17:62007744 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.165G>A (p.Arg55=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001457884] Chr17:63930339 [GRCh38]
Chr17:62007699 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.431-3C>T single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV000974775] Chr17:63929891 [GRCh38]
Chr17:62007251 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.645A>G (p.Thr215=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV000953046] Chr17:63929271 [GRCh38]
Chr17:62006631 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.67+10C>A single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV000888815]|CD79B-related disorder [RCV003948403] Chr17:63932185 [GRCh38]
Chr17:62009545 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.646G>C (p.Gly216Arg) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001227745]|not specified [RCV004032613] Chr17:63929270 [GRCh38]
Chr17:62006630 [GRCh37]
Chr17:17q23.3
uncertain significance
GRCh37/hg19 17q23.3(chr17:61838634-62465444)x4 copy number gain not provided [RCV002473722] Chr17:61838634..62465444 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.*89T>C single nucleotide variant not provided [RCV001710809]|not specified [RCV003487740] Chr17:63929137 [GRCh38]
Chr17:62006497 [GRCh37]
Chr17:17q23.3
benign
NM_000626.4(CD79B):c.*153C>G single nucleotide variant not provided [RCV001684756] Chr17:63929073 [GRCh38]
Chr17:62006433 [GRCh37]
Chr17:17q23.3
benign
NM_000626.4(CD79B):c.118+258G>A single nucleotide variant not provided [RCV001713572] Chr17:63931077 [GRCh38]
Chr17:62008437 [GRCh37]
Chr17:17q23.3
benign
NM_000626.4(CD79B):c.552T>A (p.Asp184Glu) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002001547] Chr17:63929473 [GRCh38]
Chr17:62006833 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.47C>T (p.Ala16Val) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001054030] Chr17:63932215 [GRCh38]
Chr17:62009575 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.547A>G (p.Lys183Glu) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001038438] Chr17:63929772 [GRCh38]
Chr17:62007132 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.542T>A (p.Leu181Gln) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001318435] Chr17:63929777 [GRCh38]
Chr17:62007137 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.341T>G (p.Phe114Cys) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001301812] Chr17:63930163 [GRCh38]
Chr17:62007523 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.131C>T (p.Ser44Leu) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001351377] Chr17:63930373 [GRCh38]
Chr17:62007733 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.93GGA[1] (p.Glu32del) microsatellite Agammaglobulinemia 6, autosomal recessive [RCV001341880] Chr17:63931355..63931357 [GRCh38]
Chr17:62008715..62008717 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.106C>T (p.Arg36Trp) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001359933] Chr17:63931347 [GRCh38]
Chr17:62008707 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.102G>A (p.Arg34=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001396287] Chr17:63931351 [GRCh38]
Chr17:62008711 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.430+8C>A single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001474422] Chr17:63930066 [GRCh38]
Chr17:62007426 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.549+14G>A single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001461060] Chr17:63929756 [GRCh38]
Chr17:62007116 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.430+10A>C single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001426211] Chr17:63930064 [GRCh38]
Chr17:62007424 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.648G>A (p.Gly216=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001448915] Chr17:63929268 [GRCh38]
Chr17:62006628 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.498G>A (p.Thr166=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001407040] Chr17:63929821 [GRCh38]
Chr17:62007181 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.48G>C (p.Ala16=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001429755] Chr17:63932214 [GRCh38]
Chr17:62009574 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.390G>A (p.Ser130=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001432067] Chr17:63930114 [GRCh38]
Chr17:62007474 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.213C>T (p.Ser71=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001495123]|not provided [RCV003456499] Chr17:63930291 [GRCh38]
Chr17:62007651 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.431-5C>T single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001468539] Chr17:63929893 [GRCh38]
Chr17:62007253 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.68-140G>A single nucleotide variant not provided [RCV001611160] Chr17:63931525 [GRCh38]
Chr17:62008885 [GRCh37]
Chr17:17q23.3
benign
NM_000626.4(CD79B):c.*154C>T single nucleotide variant not provided [RCV001610065] Chr17:63929072 [GRCh38]
Chr17:62006432 [GRCh37]
Chr17:17q23.3
benign
NM_000626.4(CD79B):c.372G>A (p.Gln124=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001481574] Chr17:63930132 [GRCh38]
Chr17:62007492 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.119-7C>T single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001458463] Chr17:63930392 [GRCh38]
Chr17:62007752 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.118+12C>T single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001510027] Chr17:63931323 [GRCh38]
Chr17:62008683 [GRCh37]
Chr17:17q23.3
benign
NM_000626.4(CD79B):c.550-8G>A single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001513567] Chr17:63929483 [GRCh38]
Chr17:62006843 [GRCh37]
Chr17:17q23.3
benign
NM_000626.4(CD79B):c.678A>C (p.Pro226=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001452252] Chr17:63929238 [GRCh38]
Chr17:62006598 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.213C>G (p.Ser71=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001437423] Chr17:63930291 [GRCh38]
Chr17:62007651 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.591+4A>T single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001948770] Chr17:63929430 [GRCh38]
Chr17:62006790 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.591+13G>A single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001949750] Chr17:63929421 [GRCh38]
Chr17:62006781 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.329A>G (p.Gln110Arg) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002045844] Chr17:63930175 [GRCh38]
Chr17:62007535 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.205A>G (p.Ser69Gly) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002002730] Chr17:63930299 [GRCh38]
Chr17:62007659 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.664G>A (p.Val222Ile) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001985650] Chr17:63929252 [GRCh38]
Chr17:62006612 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.679G>A (p.Gly227Ser) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001918303] Chr17:63929237 [GRCh38]
Chr17:62006597 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.152G>A (p.Arg51His) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002001339] Chr17:63930352 [GRCh38]
Chr17:62007712 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.389C>T (p.Ser130Leu) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002025995] Chr17:63930115 [GRCh38]
Chr17:62007475 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.304G>A (p.Glu102Lys) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001930669] Chr17:63930200 [GRCh38]
Chr17:62007560 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.467C>T (p.Thr156Met) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002018386] Chr17:63929852 [GRCh38]
Chr17:62007212 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.591G>A (p.Glu197=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001952198] Chr17:63929434 [GRCh38]
Chr17:62006794 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.67+3A>G single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001939314] Chr17:63932192 [GRCh38]
Chr17:62009552 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.379A>G (p.Asn127Asp) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV001952470] Chr17:63930125 [GRCh38]
Chr17:62007485 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.563_564delinsGG (p.Ala188Gly) indel Agammaglobulinemia 6, autosomal recessive [RCV001904633] Chr17:63929461..63929462 [GRCh38]
Chr17:62006821..62006822 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.67+18A>G single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002190339] Chr17:63932177 [GRCh38]
Chr17:62009537 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.549+11G>A single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002190558] Chr17:63929759 [GRCh38]
Chr17:62007119 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.405C>T (p.Gly135=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002110462] Chr17:63930099 [GRCh38]
Chr17:62007459 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.118+13G>A single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002106704] Chr17:63931322 [GRCh38]
Chr17:62008682 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.351T>C (p.Asn117=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002188168] Chr17:63930153 [GRCh38]
Chr17:62007513 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.567C>T (p.Gly189=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002168344] Chr17:63929458 [GRCh38]
Chr17:62006818 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.550-17T>C single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002169328] Chr17:63929492 [GRCh38]
Chr17:62006852 [GRCh37]
Chr17:17q23.3
benign
NM_000626.4(CD79B):c.549+16G>A single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002075254] Chr17:63929754 [GRCh38]
Chr17:62007114 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.354C>T (p.Gly118=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002174618] Chr17:63930150 [GRCh38]
Chr17:62007510 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.522C>T (p.Ile174=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002152021] Chr17:63929797 [GRCh38]
Chr17:62007157 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.100C>A (p.Arg34=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002189027] Chr17:63931353 [GRCh38]
Chr17:62008713 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.75A>C (p.Pro25=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002213052] Chr17:63931378 [GRCh38]
Chr17:62008738 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.261G>A (p.Gln87=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002141794] Chr17:63930243 [GRCh38]
Chr17:62007603 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.431-19C>T single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002217795] Chr17:63929907 [GRCh38]
Chr17:62007267 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.636G>A (p.Thr212=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002142962] Chr17:63929280 [GRCh38]
Chr17:62006640 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.282C>T (p.Gly94=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002161981] Chr17:63930222 [GRCh38]
Chr17:62007582 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.67+17G>C single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002163943] Chr17:63932178 [GRCh38]
Chr17:62009538 [GRCh37]
Chr17:17q23.3
benign
NM_000626.4(CD79B):c.408C>T (p.Cys136=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002162669] Chr17:63930096 [GRCh38]
Chr17:62007456 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.550-6C>T single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002164326] Chr17:63929481 [GRCh38]
Chr17:62006841 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.67+9C>A single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002159041] Chr17:63932186 [GRCh38]
Chr17:62009546 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.118+19C>T single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002083104] Chr17:63931316 [GRCh38]
Chr17:62008676 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.68-5A>G single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002120817] Chr17:63931390 [GRCh38]
Chr17:62008750 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.255T>C (p.Asn85=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002122485] Chr17:63930249 [GRCh38]
Chr17:62007609 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.549+11del deletion Agammaglobulinemia 6, autosomal recessive [RCV002217230] Chr17:63929759 [GRCh38]
Chr17:62007119 [GRCh37]
Chr17:17q23.3
benign
NM_000626.4(CD79B):c.585C>G (p.Thr195=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002136321] Chr17:63929440 [GRCh38]
Chr17:62006800 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.549+11G>T single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002181593] Chr17:63929759 [GRCh38]
Chr17:62007119 [GRCh37]
Chr17:17q23.3
likely benign
NC_000017.10:g.(?_62006586)_(62050201_?)dup duplication Hyperkalemic periodic paralysis [RCV003111051] Chr17:62006586..62050201 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.586T>C (p.Tyr196His) single nucleotide variant Malignant lymphoma, large B-cell, diffuse [RCV003318324] Chr17:63929439 [GRCh38]
Chr17:62006799 [GRCh37]
Chr17:17q23.3
likely pathogenic
NM_000626.4(CD79B):c.94G>C (p.Glu32Gln) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002681565] Chr17:63931359 [GRCh38]
Chr17:62008719 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.256C>A (p.Pro86Thr) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002726941] Chr17:63930248 [GRCh38]
Chr17:62007608 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.584C>G (p.Thr195Ser) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV003012260] Chr17:63929441 [GRCh38]
Chr17:62006801 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.101G>A (p.Arg34Gln) single nucleotide variant not specified [RCV004234838] Chr17:63931352 [GRCh38]
Chr17:62008712 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.124G>A (p.Ala42Thr) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002755908] Chr17:63930380 [GRCh38]
Chr17:62007740 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.431-18C>G single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV003033910] Chr17:63929906 [GRCh38]
Chr17:62007266 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.299A>G (p.Gln100Arg) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002726323] Chr17:63930205 [GRCh38]
Chr17:62007565 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.549+17G>T single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV003013505] Chr17:63929753 [GRCh38]
Chr17:62007113 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.664G>C (p.Val222Leu) single nucleotide variant not specified [RCV004144226] Chr17:63929252 [GRCh38]
Chr17:62006612 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.431-20C>T single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002740450] Chr17:63929908 [GRCh38]
Chr17:62007268 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.431-15C>A single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002640207] Chr17:63929903 [GRCh38]
Chr17:62007263 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.67+14G>A single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002953598] Chr17:63932181 [GRCh38]
Chr17:62009541 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.501G>A (p.Leu167=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002658667] Chr17:63929818 [GRCh38]
Chr17:62007178 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.67+16C>T single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002619041] Chr17:63932179 [GRCh38]
Chr17:62009539 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.387C>T (p.Thr129=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002621111] Chr17:63930117 [GRCh38]
Chr17:62007477 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.162C>T (p.Ala54=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV003080973] Chr17:63930342 [GRCh38]
Chr17:62007702 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.294G>A (p.Glu98=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002830029] Chr17:63930210 [GRCh38]
Chr17:62007570 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.431-8_431-7delinsTG indel Agammaglobulinemia 6, autosomal recessive [RCV002624492] Chr17:63929895..63929896 [GRCh38]
Chr17:62007255..62007256 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.672G>A (p.Glu224=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002573775] Chr17:63929244 [GRCh38]
Chr17:62006604 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.480T>A (p.Gly160=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002801348] Chr17:63929839 [GRCh38]
Chr17:62007199 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.93G>A (p.Ser31=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV003084365] Chr17:63931360 [GRCh38]
Chr17:62008720 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.621T>C (p.Tyr207=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002632809] Chr17:63929295 [GRCh38]
Chr17:62006655 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.641G>A (p.Arg214Gln) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002770872] Chr17:63929275 [GRCh38]
Chr17:62006635 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.217A>G (p.Asn73Asp) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002598090] Chr17:63930287 [GRCh38]
Chr17:62007647 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.549+20A>G single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV003060913] Chr17:63929750 [GRCh38]
Chr17:62007110 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.571G>C (p.Glu191Gln) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002770113] Chr17:63929454 [GRCh38]
Chr17:62006814 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.591+16G>A single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002900316] Chr17:63929418 [GRCh38]
Chr17:62006778 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.118+15C>T single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV003047068] Chr17:63931320 [GRCh38]
Chr17:62008680 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.669T>C (p.Gly223=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002877413] Chr17:63929247 [GRCh38]
Chr17:62006607 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.363C>T (p.Phe121=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV003091682] Chr17:63930141 [GRCh38]
Chr17:62007501 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.523G>A (p.Val175Met) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV003092805]|CD79B-related disorder [RCV003420337] Chr17:63929796 [GRCh38]
Chr17:62007156 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.160G>A (p.Ala54Thr) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002635251] Chr17:63930344 [GRCh38]
Chr17:62007704 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.362T>G (p.Phe121Cys) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV003066733] Chr17:63930142 [GRCh38]
Chr17:62007502 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.170G>C (p.Arg57Pro) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002943104] Chr17:63930334 [GRCh38]
Chr17:62007694 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.462G>A (p.Arg154=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV002607533] Chr17:63929857 [GRCh38]
Chr17:62007217 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.429G>A (p.Met143Ile) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV003052693] Chr17:63930075 [GRCh38]
Chr17:62007435 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.317C>T (p.Thr106Ile) single nucleotide variant not specified [RCV004265545] Chr17:63930187 [GRCh38]
Chr17:62007547 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.484A>G (p.Ile162Val) single nucleotide variant not specified [RCV004363112] Chr17:63929835 [GRCh38]
Chr17:62007195 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.245T>G (p.Met82Arg) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV003630555] Chr17:63930259 [GRCh38]
Chr17:62007619 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.549+9G>C single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV003517908] Chr17:63929761 [GRCh38]
Chr17:62007121 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.225C>T (p.Ser75=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV003630916] Chr17:63930279 [GRCh38]
Chr17:62007639 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.431-13C>T single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV003518317] Chr17:63929901 [GRCh38]
Chr17:62007261 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.534C>T (p.Phe178=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV003628892] Chr17:63929785 [GRCh38]
Chr17:62007145 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.144G>A (p.Gln48=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV003630320] Chr17:63930360 [GRCh38]
Chr17:62007720 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.431-20C>A single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV003629316] Chr17:63929908 [GRCh38]
Chr17:62007268 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.132G>A (p.Ser44=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV003629078] Chr17:63930372 [GRCh38]
Chr17:62007732 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.279G>A (p.Lys93=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV003629804] Chr17:63930225 [GRCh38]
Chr17:62007585 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.68-7C>T single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV003628684] Chr17:63931392 [GRCh38]
Chr17:62008752 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.431-18C>T single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV003824712] Chr17:63929906 [GRCh38]
Chr17:62007266 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.549+13C>T single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV003828748] Chr17:63929757 [GRCh38]
Chr17:62007117 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.550-19C>A single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV003630302] Chr17:63929494 [GRCh38]
Chr17:62006854 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.24T>C (p.Pro8=) single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV003629893] Chr17:63932238 [GRCh38]
Chr17:62009598 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.549+9G>A single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV003629469] Chr17:63929761 [GRCh38]
Chr17:62007121 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.364_366del (p.Cys122del) deletion Agammaglobulinemia 6, autosomal recessive [RCV003518856] Chr17:63930138..63930140 [GRCh38]
Chr17:62007498..62007500 [GRCh37]
Chr17:17q23.3
uncertain significance
NM_000626.4(CD79B):c.67+19G>A single nucleotide variant Agammaglobulinemia 6, autosomal recessive [RCV003843027] Chr17:63932176 [GRCh38]
Chr17:62009536 [GRCh37]
Chr17:17q23.3
likely benign
GRCh37/hg19 17q23.2-23.3(chr17:58596397-62540700)x3 copy number gain See cases [RCV004442795] Chr17:58596397..62540700 [GRCh37]
Chr17:17q23.2-23.3
uncertain significance
NM_000626.4(CD79B):c.-8C>T single nucleotide variant CD79B-related disorder [RCV003941826] Chr17:63932269 [GRCh38]
Chr17:62009629 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.214G>A (p.Gly72Ser) single nucleotide variant not specified [RCV004435542] Chr17:63930290 [GRCh38]
Chr17:62007650 [GRCh37]
Chr17:17q23.3
likely benign
NM_000626.4(CD79B):c.589G>C (p.Glu197Gln) single nucleotide variant not specified [RCV004435543] Chr17:63929436 [GRCh38]
Chr17:62006796 [GRCh37]
Chr17:17q23.3
uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2025
Count of miRNA genes:735
Interacting mature miRNAs:895
Transcripts:ENST00000006750, ENST00000349817, ENST00000392795, ENST00000558969, ENST00000559358, ENST00000583260
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH93822  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371762,006,528 - 62,006,655UniSTSGRCh37
Build 361759,360,260 - 59,360,387RGDNCBI36
Celera1756,394,590 - 56,394,717RGD
Cytogenetic Map17q23UniSTS
HuRef1757,374,243 - 57,374,370UniSTS
GeneMap99-GB4 RH Map17405.21UniSTS
PMC83897P1  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371762,006,652 - 62,007,598UniSTSGRCh37
Build 361759,360,384 - 59,361,330RGDNCBI36
Celera1756,394,714 - 56,395,660RGD
Cytogenetic Map17q23UniSTS
HuRef1757,374,367 - 57,375,313UniSTS
CD79B_3258  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371762,006,047 - 62,006,661UniSTSGRCh37
Build 361759,359,779 - 59,360,393RGDNCBI36
Celera1756,394,109 - 56,394,723RGD
HuRef1757,373,763 - 57,374,376UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High 50
Medium 393 883 343 97 1702 10 983 126 591 63 282 194 88 552 486
Low 1923 2043 1333 489 163 413 3266 2028 1492 312 1030 1215 75 652 2254 3 2
Below cutoff 48 62 31 26 20 27 83 22 1576 19 93 60 2 1 47 2

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_007368 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_000626 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001039933 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001329050 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_021602 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA804163 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC127029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AH006490 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK222954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK223210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK313583 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AX775815 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AX775817 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC002975 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC030210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC032651 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471109 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JA738625 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JA738627 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JA738629 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JC231880 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KX138262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L27587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M80461 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M89957 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  S52229 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  S79249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U22954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X83538 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X83539 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000006750   ⟹   ENSP00000006750
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1763,928,740 - 63,932,331 (-)Ensembl
Ensembl Acc Id: ENST00000349817   ⟹   ENSP00000245862
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1763,929,226 - 63,932,261 (-)Ensembl
Ensembl Acc Id: ENST00000392795   ⟹   ENSP00000376544
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1763,928,740 - 63,932,336 (-)Ensembl
Ensembl Acc Id: ENST00000558969
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1763,930,960 - 63,932,331 (-)Ensembl
Ensembl Acc Id: ENST00000559358
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1763,928,768 - 63,930,514 (-)Ensembl
Ensembl Acc Id: ENST00000583260
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1763,931,891 - 63,932,323 (-)Ensembl
Ensembl Acc Id: ENST00000698624
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1763,928,738 - 63,931,449 (-)Ensembl
RefSeq Acc Id: NM_000626   ⟹   NP_000617
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381763,928,740 - 63,932,331 (-)NCBI
GRCh371762,006,098 - 62,009,710 (-)NCBI
Build 361759,359,830 - 59,363,436 (-)NCBI Archive
HuRef1757,373,817 - 57,377,419 (-)ENTREZGENE
CHM1_11762,070,017 - 62,073,623 (-)NCBI
T2T-CHM13v2.01764,799,505 - 64,803,094 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001039933   ⟹   NP_001035022
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381763,928,740 - 63,932,331 (-)NCBI
GRCh371762,006,098 - 62,009,710 (-)NCBI
Build 361759,359,830 - 59,363,436 (-)NCBI Archive
HuRef1757,373,817 - 57,377,419 (-)ENTREZGENE
CHM1_11762,070,017 - 62,073,623 (-)NCBI
T2T-CHM13v2.01764,799,505 - 64,803,094 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001329050   ⟹   NP_001315979
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381763,928,740 - 63,932,331 (-)NCBI
T2T-CHM13v2.01764,799,505 - 64,803,094 (-)NCBI
Sequence:
RefSeq Acc Id: NM_021602   ⟹   NP_067613
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381763,928,740 - 63,932,331 (-)NCBI
GRCh371762,006,098 - 62,009,710 (-)NCBI
Build 361759,359,830 - 59,363,436 (-)NCBI Archive
HuRef1757,373,817 - 57,377,419 (-)ENTREZGENE
CHM1_11762,070,017 - 62,073,623 (-)NCBI
T2T-CHM13v2.01764,799,505 - 64,803,094 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_000617 (Get FASTA)   NCBI Sequence Viewer  
  NP_001035022 (Get FASTA)   NCBI Sequence Viewer  
  NP_001315979 (Get FASTA)   NCBI Sequence Viewer  
  NP_067613 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA58387 (Get FASTA)   NCBI Sequence Viewer  
  AAA64459 (Get FASTA)   NCBI Sequence Viewer  
  AAA72424 (Get FASTA)   NCBI Sequence Viewer  
  AAA98831 (Get FASTA)   NCBI Sequence Viewer  
  AAB24822 (Get FASTA)   NCBI Sequence Viewer  
  AAC39673 (Get FASTA)   NCBI Sequence Viewer  
  AAC60654 (Get FASTA)   NCBI Sequence Viewer  
  AAH02975 (Get FASTA)   NCBI Sequence Viewer  
  AAH30210 (Get FASTA)   NCBI Sequence Viewer  
  AAH32651 (Get FASTA)   NCBI Sequence Viewer  
  ANK58153 (Get FASTA)   NCBI Sequence Viewer  
  BAD96674 (Get FASTA)   NCBI Sequence Viewer  
  BAD96930 (Get FASTA)   NCBI Sequence Viewer  
  BAG36353 (Get FASTA)   NCBI Sequence Viewer  
  CAA58522 (Get FASTA)   NCBI Sequence Viewer  
  CAE11607 (Get FASTA)   NCBI Sequence Viewer  
  CAE11608 (Get FASTA)   NCBI Sequence Viewer  
  CCF76965 (Get FASTA)   NCBI Sequence Viewer  
  CCF76966 (Get FASTA)   NCBI Sequence Viewer  
  CCF76967 (Get FASTA)   NCBI Sequence Viewer  
  CDM22282 (Get FASTA)   NCBI Sequence Viewer  
  EAW94227 (Get FASTA)   NCBI Sequence Viewer  
  EAW94228 (Get FASTA)   NCBI Sequence Viewer  
  EAW94229 (Get FASTA)   NCBI Sequence Viewer  
  EAW94230 (Get FASTA)   NCBI Sequence Viewer  
  EAW94231 (Get FASTA)   NCBI Sequence Viewer  
  EAW94232 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000006750
  ENSP00000006750.4
  ENSP00000245862
  ENSP00000245862.2
  ENSP00000376544
  ENSP00000376544.3
GenBank Protein P40259 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_067613   ⟸   NM_021602
- Peptide Label: isoform 2 precursor
- UniProtKB: P40259 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_000617   ⟸   NM_000626
- Peptide Label: isoform 1 precursor
- UniProtKB: Q53FS2 (UniProtKB/Swiss-Prot),   Q9BU06 (UniProtKB/Swiss-Prot),   P40259 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001035022   ⟸   NM_001039933
- Peptide Label: isoform 3 precursor
- UniProtKB: P40259 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001315979   ⟸   NM_001329050
- Peptide Label: isoform 4 precursor
- Sequence:
Ensembl Acc Id: ENSP00000006750   ⟸   ENST00000006750
Ensembl Acc Id: ENSP00000245862   ⟸   ENST00000349817
Ensembl Acc Id: ENSP00000376544   ⟸   ENST00000392795
Protein Domains
Ig-like V-type   ITAM

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P40259-F1-model_v2 AlphaFold P40259 1-229 view protein structure

Promoters
RGD ID:6793859
Promoter ID:HG_KWN:26846
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562,   Lymphoblastoid
Transcripts:UC002JDO.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361759,361,471 - 59,362,572 (-)MPROMDB
RGD ID:6793858
Promoter ID:HG_KWN:26847
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000006750,   ENST00000349817,   ENST00000392795
Position:
Human AssemblyChrPosition (strand)Source
Build 361759,363,139 - 59,363,639 (-)MPROMDB
RGD ID:6853544
Promoter ID:EP74599
Type:initiation region
Name:HS_CD79B
Description:CD79B antigen (immunoglobulin-associated beta).
SO ACC ID:SO:0000170
Source:EPD (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Mammalian gene collection (MGC) full-length cDNA cloning
Position:
Human AssemblyChrPosition (strand)Source
Build 361759,363,395 - 59,363,455EPD
RGD ID:7236007
Promoter ID:EPDNEW_H23750
Type:initiation region
Name:CD79B_1
Description:CD79b molecule
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381763,932,331 - 63,932,391EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:1699 AgrOrtholog
COSMIC CD79B COSMIC
Ensembl Genes ENSG00000007312 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000006750 ENTREZGENE
  ENST00000006750.8 UniProtKB/Swiss-Prot
  ENST00000349817 ENTREZGENE
  ENST00000349817.2 UniProtKB/Swiss-Prot
  ENST00000392795 ENTREZGENE
  ENST00000392795.7 UniProtKB/Swiss-Prot
Gene3D-CATH 2.60.40.10 UniProtKB/Swiss-Prot
GTEx ENSG00000007312 GTEx
HGNC ID HGNC:1699 ENTREZGENE
Human Proteome Map CD79B Human Proteome Map
InterPro CD79a/CD79b UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_dom UniProtKB/Swiss-Prot
  Ig-like_dom_sf UniProtKB/Swiss-Prot
  Ig-like_fold UniProtKB/Swiss-Prot
  Ig_sub UniProtKB/Swiss-Prot
  Ig_V-set UniProtKB/Swiss-Prot
  Phos_immunorcpt_sig_ITAM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:974 UniProtKB/Swiss-Prot
NCBI Gene 974 ENTREZGENE
OMIM 147245 OMIM
PANTHER B-CELL ANTIGEN RECEPTOR COMPLEX-ASSOCIATED PROTEIN BETA CHAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR14334 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam ITAM UniProtKB/TrEMBL
  V-set UniProtKB/Swiss-Prot
PharmGKB PA26238 PharmGKB
PROSITE IG_LIKE UniProtKB/Swiss-Prot
  ITAM_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART ITAM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00409 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF48726 UniProtKB/Swiss-Prot
UniProt A0A192GQF2_HUMAN UniProtKB/TrEMBL
  CD79B_HUMAN UniProtKB/Swiss-Prot, ENTREZGENE
  Q53FS2 ENTREZGENE
  Q6PIS4_HUMAN UniProtKB/TrEMBL
  Q9BU06 ENTREZGENE
UniProt Secondary Q53FS2 UniProtKB/Swiss-Prot
  Q9BU06 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-11-24 CD79B  CD79b molecule  CD79B  CD79b molecule, immunoglobulin-associated beta  Symbol and/or name change 5135510 APPROVED