Slc16a10 (solute carrier family 16 member 10) - Rat Genome Database

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Gene: Slc16a10 (solute carrier family 16 member 10) Rattus norvegicus
Analyze
Symbol: Slc16a10
Name: solute carrier family 16 member 10
RGD ID: 69197
Description: Enables L-phenylalanine transmembrane transporter activity; L-tryptophan transmembrane transporter activity; and L-tyrosine transmembrane transporter activity. Involved in aromatic amino acid transport. Located in basolateral plasma membrane. Orthologous to human SLC16A10 (solute carrier family 16 member 10); INTERACTS WITH 1-nitropropane; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: aromatic amino acid transporter 1; MCT 10; monocarboxylate transporter 10; solute carrier family 16 (aromatic amino acid transporter), member 10; solute carrier family 16 (monocarboxylic acid transporters), member 10; solute carrier family 16, member 10; solute carrier family 16, member 10 (aromatic amino acid transporter); T-type amino acid transporter 1; Tat1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82045,014,229 - 45,122,392 (-)NCBIGRCr8
GRCr8 Ensembl2045,014,235 - 45,122,358 (-)EnsemblGRCr8 Ensembl
mRatBN7.22043,454,819 - 43,567,839 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2043,459,709 - 43,567,839 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2045,208,679 - 45,316,814 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02044,867,884 - 44,976,015 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02045,618,250 - 45,720,525 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02045,138,433 - 45,260,155 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2045,143,453 - 45,260,119 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02046,979,059 - 46,979,589 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.02046,863,305 - 46,913,500 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42044,211,651 - 44,325,332 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera2044,173,196 - 44,274,083 (-)NCBICelera
RGSC_v3.12044,234,662 - 44,348,343 (-)NCBI
Cytogenetic Map20q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (ISO)
1,2-dichloroethane  (ISO)
1,2-dimethylhydrazine  (ISO)
1-chloro-2,4-dinitrobenzene  (ISO)
1-nitropropane  (EXP)
17beta-estradiol  (EXP,ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-diaminotoluene  (EXP)
2,4-dinitrotoluene  (EXP)
2,6-diaminotoluene  (EXP)
2-acetamidofluorene  (EXP)
2-nitro-p-phenylenediamine  (EXP)
2-nitropropane  (EXP)
3,3',4,4'-tetrachlorobiphenyl  (ISO)
3-chloropropane-1,2-diol  (EXP)
4,4'-sulfonyldiphenol  (ISO)
4-acetylaminofluorene  (EXP)
4-nitro-1,2-phenylenediamine  (EXP)
acrylamide  (EXP)
aflatoxin B1  (EXP,ISO)
all-trans-retinoic acid  (ISO)
ammonium chloride  (EXP)
atrazine  (EXP)
azathioprine  (ISO)
benzo[a]pyrene  (ISO)
benzo[b]fluoranthene  (ISO)
beta-lapachone  (ISO)
beta-naphthoflavone  (ISO)
bisphenol A  (EXP)
bisphenol F  (ISO)
capsaicin  (EXP)
carbon nanotube  (ISO)
CGP 52608  (ISO)
chlordecone  (ISO)
chlorpyrifos  (ISO)
choline  (ISO)
chromium(6+)  (ISO)
clofibric acid  (EXP)
cocaine  (EXP)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
dicrotophos  (ISO)
diethyl hydrogen phosphate  (EXP)
dioxygen  (ISO)
disulfiram  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
entinostat  (ISO)
epoxiconazole  (ISO)
eugenol  (ISO)
fentin chloride  (EXP)
flutamide  (EXP)
folic acid  (ISO)
fonofos  (ISO)
furan  (EXP)
genistein  (ISO)
gentamycin  (EXP)
L-methionine  (ISO)
metformin  (EXP)
methotrexate  (ISO)
methoxychlor  (EXP)
methylisothiazolinone  (ISO)
mono(2-ethylhexyl) phthalate  (ISO)
N-nitrosodiethylamine  (EXP,ISO)
nickel atom  (ISO)
nickel sulfate  (ISO)
okadaic acid  (ISO)
orphenadrine  (EXP)
oxaliplatin  (EXP)
oxycodone  (EXP)
paracetamol  (EXP,ISO)
parathion  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenformin  (EXP)
phenylephrine  (EXP)
pirinixic acid  (ISO)
propanal  (ISO)
rotenone  (EXP)
SB 431542  (ISO)
silicon dioxide  (ISO)
sodium arsenate  (ISO)
sunitinib  (ISO)
terbufos  (ISO)
tetrachloromethane  (EXP,ISO)
thioacetamide  (EXP)
thiram  (ISO)
titanium dioxide  (ISO)
topotecan  (EXP)
trichloroethene  (EXP)
trichostatin A  (ISO)
triclosan  (ISO)
triphenyl phosphate  (ISO)
triptonide  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)
vorinostat  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
basolateral plasma membrane  (IBA,IDA,IEA,ISO)
cell junction  (IEA,ISO)
membrane  (IEA)
plasma membrane  (IBA,IEA,ISO)

References

References - curated
# Reference Title Reference Citation
1. Tissue-based metabolomics reveals metabolic biomarkers and potential therapeutic targets for esophageal squamous cell carcinoma. Chen Z, etal., J Pharm Biomed Anal. 2021 Apr 15;197:113937. doi: 10.1016/j.jpba.2021.113937. Epub 2021 Feb 5.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Expression cloning of a Na+-independent aromatic amino acid transporter with structural similarity to H+/monocarboxylate transporters. Kim DK, etal., J Biol Chem 2001 May 18;276(20):17221-8.
4. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
5. GOA pipeline RGD automated data pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Tentative Sequence Identification Numbers Tentative Sequence Data IDs. TIGR Gene Index, Rat Data
Additional References at PubMed
PMID:24248460  


Genomics

Comparative Map Data
Slc16a10
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82045,014,229 - 45,122,392 (-)NCBIGRCr8
GRCr8 Ensembl2045,014,235 - 45,122,358 (-)EnsemblGRCr8 Ensembl
mRatBN7.22043,454,819 - 43,567,839 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2043,459,709 - 43,567,839 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2045,208,679 - 45,316,814 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02044,867,884 - 44,976,015 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02045,618,250 - 45,720,525 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02045,138,433 - 45,260,155 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2045,143,453 - 45,260,119 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02046,979,059 - 46,979,589 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.02046,863,305 - 46,913,500 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42044,211,651 - 44,325,332 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera2044,173,196 - 44,274,083 (-)NCBICelera
RGSC_v3.12044,234,662 - 44,348,343 (-)NCBI
Cytogenetic Map20q12NCBI
SLC16A10
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh386111,087,503 - 111,231,194 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl6111,087,503 - 111,231,194 (+)EnsemblGRCh38hg38GRCh38
GRCh376111,408,706 - 111,552,397 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 366111,515,502 - 111,650,907 (+)NCBINCBI36Build 36hg18NCBI36
Build 346111,515,501 - 111,650,906NCBI
Celera6112,155,354 - 112,291,161 (+)NCBICelera
Cytogenetic Map6q21NCBI
HuRef6108,979,921 - 109,115,795 (+)NCBIHuRef
CHM1_16111,671,814 - 111,807,532 (+)NCBICHM1_1
T2T-CHM13v2.06112,266,105 - 112,414,313 (+)NCBIT2T-CHM13v2.0
Slc16a10
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391039,909,528 - 40,018,262 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1039,909,528 - 40,018,254 (-)EnsemblGRCm39 Ensembl
GRCm381040,033,532 - 40,142,270 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1040,033,532 - 40,142,258 (-)EnsemblGRCm38mm10GRCm38
MGSCv371039,753,341 - 39,862,060 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361039,765,179 - 39,831,671 (-)NCBIMGSCv36mm8
Celera1040,919,892 - 41,029,158 (-)NCBICelera
Cytogenetic Map10B1NCBI
cM Map1021.48NCBI
Slc16a10
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541135,758,612 - 35,871,164 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541135,758,612 - 35,871,179 (+)NCBIChiLan1.0ChiLan1.0
SLC16A10
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v25131,095,135 - 131,236,654 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16128,981,027 - 129,131,151 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v06108,889,644 - 109,037,479 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.16112,968,652 - 113,107,508 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl6112,968,668 - 113,106,721 (+)Ensemblpanpan1.1panPan2
SLC16A10
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11267,612,563 - 67,720,763 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1267,705,037 - 67,719,985 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1267,428,455 - 67,544,084 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01268,490,106 - 68,600,784 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1268,489,840 - 68,600,792 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11267,841,203 - 67,952,145 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01267,687,841 - 67,803,646 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01268,013,238 - 68,124,546 (+)NCBIUU_Cfam_GSD_1.0
Slc16a10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404946102,548,097 - 102,650,851 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365646,822,992 - 6,925,849 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365646,823,054 - 6,925,702 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC16A10
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl176,998,359 - 77,138,639 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1176,998,359 - 77,139,534 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2186,714,334 - 86,743,447 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SLC16A10
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11362,645,692 - 62,787,508 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1362,646,876 - 62,786,048 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604034,950,268 - 35,087,370 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc16a10
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249162,095,989 - 2,237,996 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249162,096,224 - 2,239,856 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Slc16a10
909 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:372
Count of miRNA genes:222
Interacting mature miRNAs:264
Transcripts:ENSRNOT00000000718
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4889610Pancm3Pancreatic morphology QTL 33.750.001pancreas mass (VT:0010144)pancreas wet weight (CMO:0000626)201761783247606836Rat
2303587Bw93Body weight QTL 9313body mass (VT:0001259)body weight (CMO:0000012)202510672254435887Rat
1641915Colcr9Colorectal carcinoma resistance QTL 92.970.0024intestine integrity trait (VT:0010554)benign colorectal tumor number (CMO:0001795)20153065546530655Rat
2305926Iddm37Insulin dependent diabetes mellitus QTL 376blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)20152784246527842Rat
2303626Vencon10Ventilatory control QTL 100.001respiration trait (VT:0001943)respiration rate (CMO:0000289)201919072154435887Rat
1598869Memor6Memory QTL 63.1exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)202924438854435887Rat
70158Bp60Blood pressure QTL 603arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)203161428444396023Rat
7411652Foco24Food consumption QTL 240.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)201175751554435887Rat
1331747Hrtrt16Heart rate QTL 163.163heart pumping trait (VT:2000009)heart rate (CMO:0000002)202520973454435887Rat
1598816Memor12Memory QTL 122.4exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)20260683647606836Rat
2303578Gluco50Glucose level QTL 502blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)202510672254435887Rat
2317880Alcrsp25Alcohol response QTL 252.3response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)201769755054435887Rat
9590092Insglur9Insulin/glucose ratio QTL 918.380.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)201175751554435887Rat
2300188Bmd68Bone mineral density QTL 686.40.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)202510672254435887Rat

Markers in Region
RH141878  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22043,459,516 - 43,459,703 (+)MAPPERmRatBN7.2
Rnor_6.02045,143,261 - 45,143,447NCBIRnor6.0
Rnor_5.02046,863,114 - 46,863,300UniSTSRnor5.0
RGSC_v3.42044,211,460 - 44,211,646UniSTSRGSC3.4
Celera2044,173,005 - 44,173,191UniSTS
RH 3.4 Map20471.2UniSTS
Cytogenetic Map20q12UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
9 11 49 113 91 90 59 25 59 6 218 97 11 93 45 60 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000000718   ⟹   ENSRNOP00000000718
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2045,014,235 - 45,122,358 (-)Ensembl
mRatBN7.2 Ensembl2043,459,709 - 43,567,839 (-)Ensembl
Rnor_6.0 Ensembl2045,143,453 - 45,260,119 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000087226   ⟹   ENSRNOP00000075512
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2045,014,235 - 45,122,358 (-)Ensembl
mRatBN7.2 Ensembl2043,459,709 - 43,567,839 (-)Ensembl
Rnor_6.0 Ensembl2045,144,198 - 45,259,928 (-)Ensembl
RefSeq Acc Id: NM_138831   ⟹   NP_620186
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82045,014,234 - 45,122,358 (-)NCBI
mRatBN7.22043,459,708 - 43,567,839 (-)NCBI
Rnor_6.02045,143,452 - 45,260,119 (-)NCBI
Rnor_5.02046,863,305 - 46,913,500 (-)NCBI
Rnor_5.02046,979,059 - 46,979,589 (-)NCBI
RGSC_v3.42044,211,651 - 44,325,332 (-)RGD
Celera2044,173,196 - 44,274,083 (-)RGD
Sequence:
RefSeq Acc Id: XM_039098394   ⟹   XP_038954322
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82045,014,229 - 45,122,392 (-)NCBI
mRatBN7.22043,454,819 - 43,567,648 (-)NCBI
RefSeq Acc Id: XM_039098395   ⟹   XP_038954323
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82045,014,229 - 45,121,967 (-)NCBI
mRatBN7.22043,454,819 - 43,567,435 (-)NCBI
RefSeq Acc Id: XM_063278943   ⟹   XP_063135013
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82045,014,229 - 45,121,784 (-)NCBI
RefSeq Acc Id: NP_620186   ⟸   NM_138831
- UniProtKB: Q91Y77 (UniProtKB/Swiss-Prot),   G3V621 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSRNOP00000000718   ⟸   ENSRNOT00000000718
Ensembl Acc Id: ENSRNOP00000075512   ⟸   ENSRNOT00000087226
RefSeq Acc Id: XP_038954322   ⟸   XM_039098394
- Peptide Label: isoform X1
- UniProtKB: Q91Y77 (UniProtKB/Swiss-Prot),   G3V621 (UniProtKB/Swiss-Prot),   A0A0G2KAT0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038954323   ⟸   XM_039098395
- Peptide Label: isoform X2
RefSeq Acc Id: XP_063135013   ⟸   XM_063278943
- Peptide Label: isoform X2
Protein Domains
Major facilitator superfamily (MFS) profile

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q91Y77-F1-model_v2 AlphaFold Q91Y77 1-514 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13701655
Promoter ID:EPDNEW_R12179
Type:single initiation site
Name:Slc16a10_1
Description:solute carrier family 16 member 10
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.02045,260,133 - 45,260,193EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:69197 AgrOrtholog
BioCyc Gene G2FUF-3450 BioCyc
Ensembl Genes ENSRNOG00000000588 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000000718 ENTREZGENE
  ENSRNOT00000000718.6 UniProtKB/Swiss-Prot
  ENSRNOT00000087226 ENTREZGENE
Gene3D-CATH 1.20.1250.20 UniProtKB/Swiss-Prot
InterPro MFS UniProtKB/Swiss-Prot
  MFS_dom UniProtKB/Swiss-Prot
  MFS_trans_sf UniProtKB/Swiss-Prot
  Proton-linked_MCT UniProtKB/Swiss-Prot
KEGG Report rno:170566 UniProtKB/Swiss-Prot
NCBI Gene Slc16a10 ENTREZGENE
PANTHER MONOCARBOXYLATE TRANSPORTER UniProtKB/Swiss-Prot
  PTHR11360:SF119 UniProtKB/Swiss-Prot
Pfam MFS_1 UniProtKB/Swiss-Prot
PhenoGen Slc16a10 PhenoGen
PROSITE MFS UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000000588 RatGTEx
Superfamily-SCOP SSF103473 UniProtKB/Swiss-Prot
TIGR TC221015
UniProt A0A0G2KAT0 ENTREZGENE, UniProtKB/TrEMBL
  A6KII0_RAT UniProtKB/TrEMBL
  A6KII2_RAT UniProtKB/TrEMBL
  A6KII3_RAT UniProtKB/TrEMBL
  G3V621 ENTREZGENE
  MOT10_RAT UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary G3V621 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-25 Slc16a10  solute carrier family 16 member 10  Slc16a10  solute carrier family 16 (aromatic amino acid transporter), member 10  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2013-08-02 Slc16a10  solute carrier family 16 (aromatic amino acid transporter), member 10  Slc16a10  solute carrier family 16, member 10 (aromatic amino acid transporter)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2012-10-16 Slc16a10  solute carrier family 16, member 10 (aromatic amino acid transporter)  Slc16a10  solute carrier family 16 (monocarboxylic acid transporters), member 10  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2004-09-10 Slc16a10  solute carrier family 16 (monocarboxylic acid transporters), member 10    solute carrier family 16, member 10  Name updated 1299863 APPROVED
2002-06-10 Slc16a10  solute carrier family 16, member 10      Symbol and Name status set to approved 70586 APPROVED
2002-02-27 Slc16a10  solute carrier family 16, member 10      Symbol and Name updated to reflect Human and Mouse nomenclature 70292 APPROVED

RGD Curation Notes
Note Type Note Reference
gene_disease defect may be involved in in blue diaper syndrome 68676
gene_function low-affinity transport of aromatic amino acids such as tryptophan, tyrosine, and phenylalanine 68676
gene_process plays an essential role in aromatic amino acid absorption from the intestinal lumen 68676