Lxn (latexin) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Lxn (latexin) Mus musculus
Analyze
Symbol: Lxn
Name: latexin
RGD ID: 68514
MGI Page MGI
Description: Enables metalloendopeptidase inhibitor activity. Acts upstream of or within detection of temperature stimulus involved in sensory perception of pain. Predicted to be located in cytoplasm. Predicted to be active in extracellular space. Is expressed in cartilage; central nervous system; peripheral nervous system; and tibia. Orthologous to human LXN (latexin).
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: ECI; endogenous carboxypeptidase inhibitor; MGC144352; MGC144353; TCI; tissue carboxypeptidase inhibitor
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39367,365,332 - 67,371,240 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl367,365,331 - 67,371,259 (-)EnsemblGRCm39 Ensembl
GRCm38367,457,999 - 67,463,907 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl367,457,998 - 67,463,926 (-)EnsemblGRCm38mm10GRCm38
MGSCv37367,261,921 - 67,267,829 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36367,545,928 - 67,551,836 (-)NCBIMGSCv36mm8
Celera367,584,098 - 67,590,006 (-)NCBICelera
Cytogenetic Map3E1NCBI
cM Map330.98NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane  (ISO)
1,1-dichloroethene  (EXP)
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (ISO)
2,2',5,5'-tetrachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-butoxyethanol  (EXP)
3,4-methylenedioxymethamphetamine  (EXP)
3-chloropropane-1,2-diol  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (EXP)
5-aza-2'-deoxycytidine  (ISO)
5-fluorouracil  (ISO)
6-propyl-2-thiouracil  (ISO)
8-Br-cAMP  (ISO)
acrylamide  (ISO)
aflatoxin B1  (EXP)
alachlor  (ISO)
all-trans-retinoic acid  (ISO)
amitrole  (ISO)
ammonium chloride  (ISO)
arsenite(3-)  (EXP)
azathioprine  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[b]fluoranthene  (EXP)
beta-naphthoflavone  (ISO)
biochanin A  (ISO)
bisphenol A  (ISO)
bisphenol F  (ISO)
Brodifacoum  (ISO)
calcitriol  (ISO)
choline  (EXP)
cobalt dichloride  (ISO)
copper(II) chloride  (ISO)
crocidolite asbestos  (ISO)
cyclosporin A  (EXP)
dexamethasone  (ISO)
dibenz[a,h]anthracene  (EXP)
diclofenac  (ISO)
dioxygen  (EXP)
diuron  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
etoposide  (EXP)
flavonoids  (ISO)
folic acid  (EXP)
formaldehyde  (ISO)
furan  (ISO)
genistein  (ISO)
gentamycin  (ISO)
glycidyl methacrylate  (ISO)
indole-3-methanol  (ISO)
L-ascorbic acid  (EXP)
L-methionine  (EXP)
lucanthone  (ISO)
methimazole  (ISO)
methotrexate  (ISO)
methylmercury chloride  (ISO)
mifepristone  (ISO)
Muraglitazar  (ISO)
N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal  (EXP)
N-ethyl-N-nitrosourea  (ISO)
N-nitrosodiethylamine  (ISO)
oxaliplatin  (ISO)
paracetamol  (ISO)
phenobarbital  (ISO)
piroxicam  (ISO)
potassium chromate  (ISO)
progesterone  (ISO)
resveratrol  (EXP)
sodium arsenite  (EXP,ISO)
sodium aurothiomalate  (ISO)
sodium fluoride  (EXP)
sulfadimethoxine  (ISO)
sulforaphane  (ISO)
sunitinib  (ISO)
temozolomide  (ISO)
Tesaglitazar  (ISO)
testosterone  (ISO)
tetrachloromethane  (EXP)
thiram  (ISO)
titanium dioxide  (EXP)
topotecan  (ISO)
triadimefon  (ISO)
trimellitic anhydride  (EXP)
triphenyl phosphate  (ISO)
triptonide  (EXP)
troglitazone  (ISO)
valproic acid  (ISO)
vinclozolin  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. Mouse MP Annotation Import Pipeline RGD automated import pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9119386   PMID:9259282   PMID:9457684   PMID:9722956   PMID:10349636   PMID:10556287   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11353388   PMID:11455960   PMID:12477932  
PMID:14515137   PMID:15698574   PMID:15782199   PMID:16141072   PMID:16141073   PMID:16469302   PMID:16602821   PMID:16919269   PMID:17220891   PMID:17239249   PMID:18498732   PMID:18498735  
PMID:19059214   PMID:19463158   PMID:21267068   PMID:21567403   PMID:21572518   PMID:21873635   PMID:23028717   PMID:24154525   PMID:24952961   PMID:25341047   PMID:28330618   PMID:29513653  
PMID:31171637   PMID:32555320   PMID:34085389   PMID:35210404   PMID:36933218   PMID:39424784   PMID:39694381  


Genomics

Comparative Map Data
Lxn
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39367,365,332 - 67,371,240 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl367,365,331 - 67,371,259 (-)EnsemblGRCm39 Ensembl
GRCm38367,457,999 - 67,463,907 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl367,457,998 - 67,463,926 (-)EnsemblGRCm38mm10GRCm38
MGSCv37367,261,921 - 67,267,829 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36367,545,928 - 67,551,836 (-)NCBIMGSCv36mm8
Celera367,584,098 - 67,590,006 (-)NCBICelera
Cytogenetic Map3E1NCBI
cM Map330.98NCBI
LXN
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383158,666,414 - 158,672,648 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3158,645,822 - 158,672,648 (-)EnsemblGRCh38hg38GRCh38
GRCh373158,384,203 - 158,390,437 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363159,866,900 - 159,873,176 (-)NCBINCBI36Build 36hg18NCBI36
Build 343159,866,907 - 159,873,184NCBI
Celera3156,806,788 - 156,813,067 (-)NCBICelera
Cytogenetic Map3q25.32NCBI
HuRef3155,780,049 - 155,786,328 (-)NCBIHuRef
CHM1_13158,347,170 - 158,353,449 (-)NCBICHM1_1
T2T-CHM13v2.03161,440,336 - 161,446,570 (-)NCBIT2T-CHM13v2.0
Lxn
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82154,037,604 - 154,043,473 (-)NCBIGRCr8
mRatBN7.22151,727,556 - 151,733,426 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2151,727,102 - 151,733,460 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2158,844,126 - 158,849,894 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02156,894,624 - 156,900,393 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02151,527,375 - 151,533,143 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02164,628,565 - 164,634,434 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2164,628,566 - 164,634,434 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02183,977,968 - 183,983,837 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42157,310,036 - 157,315,905 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12157,259,999 - 157,265,868 (-)NCBI
Celera2146,097,077 - 146,102,946 (-)NCBICelera
Cytogenetic Map2q32NCBI
Lxn
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554489,414,721 - 9,421,575 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554489,414,721 - 9,421,575 (-)NCBIChiLan1.0ChiLan1.0
LXN
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22156,608,664 - 156,617,760 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13156,613,379 - 156,619,970 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03155,692,283 - 155,698,605 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13163,743,319 - 163,749,614 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3163,743,319 - 163,749,614 (-)Ensemblpanpan1.1panPan2
LXN
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12351,962,877 - 51,968,447 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2351,962,873 - 51,969,172 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2351,772,677 - 51,778,236 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02352,601,679 - 52,609,457 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2352,603,873 - 52,610,212 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12352,182,014 - 52,189,772 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02352,234,990 - 52,242,749 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02352,520,422 - 52,528,212 (-)NCBIUU_Cfam_GSD_1.0
Lxn
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560284,460,719 - 84,466,968 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365195,266,664 - 5,273,245 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365195,266,988 - 5,273,227 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LXN
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1398,435,320 - 98,441,785 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11398,435,318 - 98,441,823 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213106,728,207 - 106,734,674 (-)NCBISscrofa10.2Sscrofa10.2susScr3
LXN
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11532,170,100 - 32,177,239 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1532,171,183 - 32,180,384 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660414,734,054 - 4,740,325 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Lxn
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473036,379,576 - 36,388,760 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473036,382,179 - 36,388,785 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Lxn
350 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:322
Count of miRNA genes:267
Interacting mature miRNAs:289
Transcripts:ENSMUST00000058981, ENSMUST00000160202, ENSMUST00000160827
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142399Aec1_mautoimmune exocrinopathy 1 (mouse)Not determined7586174102690034Mouse
14746977Manh53_mmandible shape 53 (mouse)33592528069925280Mouse
26884378Skwq6_mskull length QTL 6, 10 week (mouse)351907421102307316Mouse
1301971Cia5_mcollagen induced arthritis QTL 5 (mouse)Not determined366046658100046795Mouse
15039332Nmrs6_mNAFLD-associated magnetic resonance shift 6 (mouse)33417074168170741Mouse
1301585Cd4ts1_mCD4 T cell subset 1 (mouse)Not determined33970410273704231Mouse
4141116Lgaq4_mlate growth adjusted QTL 4 (mouse)Not determined1024922183184946Mouse
4141563Lgq3_mlate growth QTL 3 (mouse)Not determined1024922183184946Mouse
1357584Splq6_mspleen weight QTL 6 (mouse)Not determined31024922183184946Mouse
26884382Bzwq1_mbi-zygomatic width QTL 1, 5 week (mouse)352207421137205761Mouse
11041901Lmr11b_mleishmaniasis resistance 11b (mouse)33970410273704231Mouse
1357585Manln3_mmandible length 3 (mouse)Not determined35262550986625745Mouse
26884380Skwq1_mskull length QTL 1, 5 week (mouse)343954435101607316Mouse
13464139Nhdlq17_mnon-HDL QTL 17 (mouse)35292318386923183Mouse
1300895Hdl5_mHDL level 5 (mouse)Not determined34949500583495118Mouse
15039336Nmrs2_mNAFLD-associated magnetic resonance shift 2 (mouse)33457610368576103Mouse
26884436Zlq3_mzygomatic length QTL 3, 10 week (mouse)33265060142405761Mouse
1301917Tshp4_mtooth shape 4 (mouse)Not determined35262550986625745Mouse
26884427Cvht4_mcranial vault height 4, 10 week (mouse)316054164109707316Mouse
4141294Bmd24_mbone mineral density 24 (mouse)Not determined36174006195740241Mouse
1301824Susp_msuppressor of superoxide production (mouse)Not determined34949500583495118Mouse
1357440Hrtpq1_mheart weight percentage QTL 1 (mouse)Not determined31024922183184946Mouse
10755516Amzn1_manatomical modifier of Zfp423 1 (mouse)33970410273704231Mouse
1558925Hivan1_mHIV-associated nephropathy 1 (mouse)Not determined3758617468716946Mouse
9587784Afw13_mabdominal fat weight QTL 13 (mouse)Not determined33375204567752228Mouse
1301705Sles3_msystemic lupus erythmatosus suppressor 3 (mouse)Not determined337174862143353183Mouse
39128206Lwq18_mliver weight QTL 18 (mouse)31024922183184946Mouse
13207570Tcq12_mtotal cholesterol QTL 12 (mouse)316504164130163649Mouse
26884422Cvht7_mcranial vault height 7, 16 week (mouse)328954149118893649Mouse
1300593Skull4_mskull morphology 4 (mouse)Not determined35262550986625745Mouse
12880419V125Dq4_mvitamin D active form serum level QTL 4 (mouse)35890730792907307Mouse
4141079Ath23_matherosclerosis 23 (mouse)Not determined4935758183357581Mouse
18337272Bmd46_mbone mineral density 46, males (mouse)33540742169407421Mouse
11039513Ltpr3a_mLeishmania tropica response 3a (mouse)33970410273704231Mouse
10043882Bwtq13_mbody weight QTL 13 (mouse)Not determined33375204567752228Mouse
10412073Ssen2_msuseptibility to Sendai virus 2 (mouse)Not determined33353546567535615Mouse
11039519Ltpr3_mLeishmania tropica response 3 (mouse)356704102100464137Mouse
4141255W10q3_mweight 10 weeks QTL 3 (mouse)Not determined1024922183184946Mouse
1300587Aod2_mautoimmune ovarian dysgenesis 2 (mouse)Not determined33717974268716946Mouse
1302056Orgwq4_morgan weight QTL 4 (mouse)Not determined330067588147304689Mouse
13208566Bmiq5_mbody mass index QTL 5 (mouse)340954435115793649Mouse

Markers in Region
RH129902  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38367,458,079 - 67,458,276UniSTSGRCm38
MGSCv37367,262,001 - 67,262,198UniSTSGRCm37
Celera367,584,178 - 67,584,375UniSTS
Cytogenetic Map3E1UniSTS
cM Map331.6UniSTS
cM Map331.6UniSTS


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000058981   ⟹   ENSMUSP00000060732
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl367,365,331 - 67,371,259 (-)Ensembl
GRCm38.p6 Ensembl367,457,998 - 67,463,926 (-)Ensembl
Ensembl Acc Id: ENSMUST00000160202
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl367,368,394 - 67,371,115 (-)Ensembl
GRCm38.p6 Ensembl367,461,061 - 67,463,782 (-)Ensembl
Ensembl Acc Id: ENSMUST00000160827
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl367,365,334 - 67,368,967 (-)Ensembl
GRCm38.p6 Ensembl367,458,001 - 67,461,634 (-)Ensembl
RefSeq Acc Id: NM_016753   ⟹   NP_058033
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39367,365,332 - 67,371,240 (-)NCBI
GRCm38367,457,999 - 67,463,907 (-)ENTREZGENE
MGSCv37367,261,921 - 67,267,829 (-)RGD
Celera367,584,098 - 67,590,006 (-)RGD
cM Map3 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_058033   ⟸   NM_016753
- UniProtKB: Q3UDQ0 (UniProtKB/Swiss-Prot),   Q8CCS8 (UniProtKB/Swiss-Prot),   P70202 (UniProtKB/Swiss-Prot),   Q14BZ3 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000060732   ⟸   ENSMUST00000058981
Protein Domains
Cystatin LXN-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P70202-F1-model_v2 AlphaFold P70202 1-222 view protein structure

Promoters
RGD ID:6834048
Promoter ID:MM_KWN:34535
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day3,   Brain,   MEF_B4,   MEF_B6
Transcripts:OTTMUST00000072124
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36367,265,291 - 67,266,242 (-)MPROMDB
RGD ID:6834046
Promoter ID:MM_KWN:34536
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Lung,   MEF_B4,   MEF_B6
Transcripts:OTTMUST00000072122,   OTTMUST00000072123
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36367,267,619 - 67,268,119 (-)MPROMDB
RGD ID:6880836
Promoter ID:EPDNEW_M3869
Type:initiation region
Name:Lxn_1
Description:Mus musculus latexin , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38367,463,818 - 67,463,878EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:107633 AgrOrtholog
Ensembl Genes ENSMUSG00000047557 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000058981 ENTREZGENE
  ENSMUST00000058981.3 UniProtKB/Swiss-Prot
Gene3D-CATH 3.10.450.10 UniProtKB/Swiss-Prot
InterPro CYSTATIN_LXN UniProtKB/Swiss-Prot
  Cystatin_sf UniProtKB/Swiss-Prot
  Prot_inh_latexin UniProtKB/Swiss-Prot
KEGG Report mmu:17035 UniProtKB/Swiss-Prot
MGD MGI:107633 ENTREZGENE
NCBI Gene 17035 ENTREZGENE
PANTHER LATEXIN UniProtKB/Swiss-Prot
  PTHR28591 UniProtKB/Swiss-Prot
Pfam Latexin UniProtKB/Swiss-Prot
  Latexin_C UniProtKB/Swiss-Prot
PhenoGen Lxn PhenoGen
PIRSF Prot_inh_latexin UniProtKB/Swiss-Prot
PROSITE CYSTATIN_LXN UniProtKB/Swiss-Prot
Superfamily-SCOP SSF54403 UniProtKB/Swiss-Prot
UniProt LXN_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q14BZ3 ENTREZGENE, UniProtKB/TrEMBL
  Q3UDQ0 ENTREZGENE
  Q8CCS8 ENTREZGENE
UniProt Secondary Q3UDQ0 UniProtKB/Swiss-Prot
  Q8CCS8 UniProtKB/Swiss-Prot