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Gene: Uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1) Rattus norvegicus

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Symbol:

Uba52

Name:

ubiquitin A-52 residue ribosomal protein fusion product 1

RGD ID:

68344

Description:

Predicted to enable protein tag activity and ubiquitin protein ligase binding activity. Predicted to be a structural constituent of ribosome. Involved in response to insecticide. Part of cytosolic large ribosomal subunit. Orthologous to human UBA52 (ubiquitin A-52 residue ribosomal protein fusion product 1); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 3H-1,2-dithiole-3-thione.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

60S ribosomal protein L40; CEP52; Rps27a; Ubb; ubiquitin; ubiquitin-60S ribosomal protein L40

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	18,952,583 - 18,954,780 (+)	NCBI		GRCr8
mRatBN7.2	16	18,918,614 - 18,920,807 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	18,900,616 - 18,920,807 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	16	18,960,438 - 18,962,595 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	20,093,260 - 20,095,416 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	19,013,400 - 19,015,557 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	20,668,925 - 20,671,127 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	20,668,971 - 20,671,127 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	20,524,450 - 20,526,606 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	19,425,401 - 19,427,557 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	16	19,425,406 - 19,427,555 (+)	NCBI
Celera	16	19,110,027 - 19,112,183 (+)	NCBI		Celera
Cytogenetic Map	16	p14	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Brain Injuries (IEP)

colon carcinoma (ISO)

Diabetic Nephropathies (ISO)

Experimental Diabetes Mellitus (ISO)

Megalencephaly-Polymicrogyria-Polydactyly-Hydrocephalus Syndrome 1 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

17beta-estradiol (EXP)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

3H-1,2-dithiole-3-thione (EXP)

4,4'-diaminodiphenylmethane (ISO)

4,4'-sulfonyldiphenol (ISO)

4-(N-nitrosomethylamino)-1-(3-pyridyl)butan-1-one (ISO)

5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole (EXP)

6-propyl-2-thiouracil (EXP)

aflatoxin B1 (EXP)

aluminium atom (ISO)

aluminium(0) (ISO)

amiodarone (EXP)

amitriptyline (EXP)

ammonium chloride (EXP)

arsane (ISO)

arsenic atom (ISO)

arsenic trichloride (ISO)

arsenite(3-) (ISO)

benzbromarone (EXP)

benzo[a]pyrene (ISO)

beta-lapachone (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

cadmium dichloride (ISO)

cannabidiol (ISO)

capivasertib (ISO)

chloropicrin (ISO)

chromium(6+) (ISO)

clofibrate (EXP)

clomipramine (EXP)

clozapine (ISO)

cobalt dichloride (ISO)

copper atom (ISO)

copper(0) (ISO)

dibutyl phthalate (EXP)

dinophysistoxin 1 (ISO)

diquat (ISO)

disodium selenite (ISO)

diuron (ISO)

elemental selenium (ISO)

enzalutamide (ISO)

ethanol (ISO)

fenpyroximate (ISO)

fenthion (ISO)

flavonoids (EXP)

flutamide (EXP)

furan (EXP)

gallic acid (ISO)

haloperidol (ISO)

hydralazine (ISO)

imipramine (EXP)

ivermectin (ISO)

ketoconazole (EXP)

L-ethionine (EXP)

lead(0) (ISO)

manganese atom (ISO)

manganese(0) (ISO)

methidathion (ISO)

N-methyl-4-phenylpyridinium (ISO)

omeprazole (EXP)

parathion (ISO)

permethrin (EXP)

picoxystrobin (ISO)

pirinixic acid (EXP)

potassium dichromate (ISO)

pyrimidifen (ISO)

rotenone (ISO)

selenium atom (ISO)

silicon dioxide (EXP)

sodium arsenite (ISO)

Soman (EXP)

tetrachloromethane (EXP)

thioacetamide (EXP)

thiram (ISO)

titanium dioxide (ISO)

trichloroethene (EXP)

triphenyl phosphate (ISO)

triptonide (ISO)

valproic acid (ISO)

vinclozolin (EXP)

vitamin E (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cytoplasmic translation (IEA,ISO)

lysosome localization (IEA)

modification-dependent protein catabolic process (IBA)

protein ubiquitination (IBA)

response to insecticide (IEP)

translation (IEA)

Cellular Component

BORC complex (IEA)

cytoplasm (IBA,IEA,ISO)

cytoplasmic side of rough endoplasmic reticulum membrane (ISO)

cytosol (IEA)

cytosolic large ribosomal subunit (IDA,IEA,ISO)

cytosolic ribosome (IEA,ISO)

large ribosomal subunit (ISO)

nucleus (IBA,IEA)

ribonucleoprotein complex (IEA)

ribosome (IEA)

synapse (ISO)

Molecular Function

protein binding (ISO)

protein tag activity (IBA)

structural constituent of ribosome (IBA,IEA,ISO)

ubiquitin protein ligase binding (IBA)

Molecular Pathway Annotations Click to see Annotation Detail View

ribosome biogenesis pathway (ISO)

translation pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Structures of the human and Drosophila 80S ribosome.	Anger AM, etal., Nature. 2013 May 2;497(7447):80-5. doi: 10.1038/nature12104.
2.	Ubiquitin fusion proteins are overexpressed in colon cancer but not in gastric cancer.	Barnard GF, etal., Biochim Biophys Acta. 1995 Dec 12;1272(3):147-53.
3.	The carboxyl extensions of two rat ubiquitin fusion proteins are ribosomal proteins S27a and L40.	Chan YL, etal., Biochem Biophys Res Commun 1995 Oct 13;215(2):682-90.
4.	Characterization of diabetic nephropathy by urinary proteomic analysis: identification of a processed ubiquitin form as a differentially excreted protein in diabetic nephropathy patients.	Dihazi H, etal., Clin Chem. 2007 Sep;53(9):1636-45. Epub 2007 Jul 18.
5.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
6.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
7.	The cDNA for the ubiquitin-52-amino-acid fusion protein from rat encodes a previously unidentified 60 S ribosomal subunit protein.	Redman KL and Burris GW, Biochem J 1996 Apr 1;315 ( Pt 1):315-21.
8.	GOA pipeline	RGD automated data pipeline
9.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
10.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
11.	Comprehensive gene review and curation	RGD comprehensive gene curation
12.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
13.	Isolation and functional analysis of mouse UbA52 gene and its relevance to diabetic nephropathy.	Sun L, etal., J Biol Chem. 2002 Aug 16;277(33):29953-62. Epub 2002 May 24.
14.	Tentative Sequence Identification Numbers	Tentative Sequence Data IDs. TIGR Gene Index, Rat Data
15.	The localization of proteins encoded by CRYM, KIAA1199, UBA52, COL9A3, and COL9A1, genes highly expressed in the cochlea.	Usami S, etal., Neuroscience. 2008 Jun 12;154(1):22-8. doi: 10.1016/j.neuroscience.2008.03.018. Epub 2008 Mar 19.
16.	Proteomic analysis for early neurodegenerative biomarker detection in an animal model.	Vincenzetti S, etal., Biochimie. 2016 Feb;121:79-86. doi: 10.1016/j.biochi.2015.11.026. Epub 2015 Nov 26.
17.	Ubiquitin and ubiquitin-conjugated protein expression in the rat cerebral cortex and hippocampus following traumatic brain injury (TBI).	Yao X, etal., Brain Res. 2007 Nov 28;1182:116-22. Epub 2007 Sep 14.

Additional References at PubMed

PMID:8018730	PMID:8031840	PMID:9219540	PMID:10559001	PMID:15489334	PMID:16452087	PMID:16502470	PMID:17634366	PMID:17897319	PMID:19190083	PMID:21630459	PMID:22043315
PMID:23376485	PMID:23533145	PMID:24930395	PMID:26316108	PMID:31904090	PMID:33609735	PMID:36497031	PMID:36755387

Genomics

Comparative Map Data

Uba52
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	18,952,583 - 18,954,780 (+)	NCBI		GRCr8
mRatBN7.2	16	18,918,614 - 18,920,807 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	18,900,616 - 18,920,807 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	16	18,960,438 - 18,962,595 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	20,093,260 - 20,095,416 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	19,013,400 - 19,015,557 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	20,668,925 - 20,671,127 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	20,668,971 - 20,671,127 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	20,524,450 - 20,526,606 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	19,425,401 - 19,427,557 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	16	19,425,406 - 19,427,555 (+)	NCBI
Celera	16	19,110,027 - 19,112,183 (+)	NCBI		Celera
Cytogenetic Map	16	p14	NCBI

UBA52
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	18,563,766 - 18,577,550 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	18,571,730 - 18,577,550 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	18,682,534 - 18,688,360 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	18,543,614 - 18,549,270 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	19	18,543,667 - 18,547,050	NCBI
Celera	19	18,584,823 - 18,590,479 (+)	NCBI		Celera
Cytogenetic Map	19	p13.11	NCBI
HuRef	19	18,245,210 - 18,250,866 (+)	NCBI		HuRef
CHM1_1	19	18,682,813 - 18,688,469 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	19	18,698,806 - 18,712,614 (+)	NCBI		T2T-CHM13v2.0

Uba52
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	70,960,913 - 70,963,067 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	70,960,913 - 70,963,451 (-)	Ensembl		GRCm39 Ensembl
GRCm38	8	70,508,263 - 70,510,417 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	3,973,092 - 3,973,595 (-)	Ensembl	GRCm38		mm10	GRCm38
GRCm38.p6 Ensembl	8	70,508,263 - 70,510,801 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	73,032,165 - 73,034,266 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	73,437,255 - 73,439,356 (-)	NCBI		MGSCv36	mm8
Celera	8	73,064,684 - 73,066,785 (-)	NCBI		Celera
Cytogenetic Map	8	B3.3	NCBI
cM Map	8	34.15	NCBI

Uba52
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955524	3,006,147 - 3,018,772 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955524	3,007,074 - 3,009,886 (-)	NCBI	ChiLan1.0	ChiLan1.0

UBA52
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	23,430,681 - 23,434,163 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	22,439,183 - 22,442,650 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	18,040,946 - 18,052,445 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	19,018,821 - 19,022,263 (+)	NCBI	panpan1.1	PanPan1.1	panPan2

UBA52
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	44,477,128 - 44,480,023 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	44,477,130 - 44,479,948 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	44,391,819 - 44,394,638 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	44,963,325 - 44,966,217 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	44,963,327 - 44,966,145 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	44,200,687 - 44,203,507 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	44,610,646 - 44,613,463 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	44,886,089 - 44,888,908 (-)	NCBI		UU_Cfam_GSD_1.0

Uba52
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	203,157,851 - 203,160,864 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936596	2,706,994 - 2,719,846 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936596	2,706,990 - 2,709,957 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

UBA52
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	59,238,906 - 59,240,274 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	59,238,802 - 59,241,512 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	59,061,299 - 59,064,004 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

UBA52
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	17,040,127 - 17,043,569 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	17,040,064 - 17,045,737 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666074	2,294,542 - 2,298,341 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Uba52
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624908	1,736,899 - 1,750,516 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624908	1,745,903 - 1,748,750 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Uba52
13 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	70
Count of miRNA genes:	66
Interacting mature miRNAs:	70
Transcripts:	ENSRNOT00000027073
Prediction methods:	Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
631561	Hcuc2	Hepatic copper content QTL 2	2.8		liver copper amount (VT:0003065)	liver total copper weight (CMO:0001507)	16	1	39533949	Rat
1582235	Insul8	Insulin level QTL 8	3.3	0.0063	blood insulin amount (VT:0001560)	calculated serum insulin level (CMO:0000359)	16	1	26727669	Rat
2307172	Activ4	Activity QTL 4	3.71	0.00023	locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	16	1	33418960	Rat
1354584	Despr6	Despair related QTL 6	3.1	0.0067	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	16	1	39533930	Rat
2302380	Slep6	Serum leptin concentration QTL 6	3.36		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	16	1	32139025	Rat
737819	Hcas4	Hepatocarcinoma susceptibility QTL 4	4.43		liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	16	4227609	46975965	Rat
631517	Scl9	Serum cholesterol level QTL 9	3.3		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	16	15726433	21034895	Rat
9590151	Scort8	Serum corticosterone level QTL 8	8.45	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	16	1	30836262	Rat
1354625	Despr7	Despair related QTL 7	3.16	0.016	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	16	1	44977551	Rat
61338	Bp23	Blood pressure QTL 23	4.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	16	4227609	49227609	Rat
61405	Niddm6	Non-insulin dependent diabetes mellitus QTL 6	3.66	0.001	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	16	4227609	48972724	Rat
631830	Alc7	Alcohol consumption QTL 7	2.9		consumption behavior trait (VT:0002069)	ethanol drink intake rate (CMO:0001407)	16	1	26727669	Rat
7411664	Foco30	Food consumption QTL 30	11	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	16	1	44588133	Rat
1600378	Arunc4	Aerobic running capacity QTL 4		0.03	exercise endurance trait (VT:0002332)	maximum distance run on treadmill (CMO:0001406)	16	380245	80345693	Rat
70183	BpQTLcluster13	Blood pressure QTL cluster 13	3.654		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	16	4227609	43025077	Rat
1600369	Hcas8	Hepatocarcinoma susceptibility QTL 8			liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	16	1	22477621	Rat
737826	Alc11	Alcohol consumption QTL 11	3.2		consumption behavior trait (VT:0002069)	ethanol drink intake rate (CMO:0001407)	16	4227609	60252231	Rat
2303566	Bw90	Body weight QTL 90	2		body mass (VT:0001259)	body weight (CMO:0000012)	16	1	39533930	Rat
2312663	Slep9	Serum leptin concentration QTL 9		0.001	blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	16	832236	59492508	Rat
2306902	Bp339	Blood pressure QTL 339		0.01	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	16	3380150	43025077	Rat
1300133	Rf24	Renal function QTL 24	3.64		blood creatinine amount (VT:0005328)	creatinine clearance (CMO:0000765)	16	3380150	21361552	Rat
2312660	Bw95	Body weight QTL 95		0.05	inguinal fat pad mass (VT:0010424)	inguinal fat pad weight to body weight ratio (CMO:0001253)	16	832236	59492508	Rat
2312666	Insul16	Insulin level QTL 16		0.01	blood insulin amount (VT:0001560)	serum insulin level (CMO:0000358)	16	832236	59492508	Rat
634355	Rends4	Renal damage susceptibility QTL 4		0.05	kidney blood vessel morphology trait (VT:0000530)	organ lesion measurement (CMO:0000677)	16	1	26727669	Rat
70205	Gcr3	Gastric cancer resistance QTL 3	2.3		stomach morphology trait (VT:0000470)	stomach tumor diameter (CMO:0001889)	16	17696791	82635055	Rat
2293343	Glom16	Glomerulus QTL 16	7.4		kidney glomerulus integrity trait (VT:0010546)	kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)	16	832236	46053497	Rat
6903319	Bw114	Body weight QTL 114	2.7	0.0037	body mass (VT:0001259)	body weight (CMO:0000012)	16	1	43534949	Rat
2312669	Stl23	Serum triglyceride level QTL 23		0.01	blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	16	832236	59492508	Rat

Markers in Region

RH128982

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	18,924,775 - 18,924,931 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	20,675,096 - 20,675,251	NCBI	Rnor6.0
Rnor_5.0	16	20,530,575 - 20,530,730	UniSTS	Rnor5.0
RGSC_v3.4	16	19,431,526 - 19,431,681	UniSTS	RGSC3.4
Celera	16	19,116,152 - 19,116,307	UniSTS
RH 3.4 Map	16	214.42	UniSTS
Cytogenetic Map	16	p14	UniSTS

RH131774

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	18,947,292 - 18,947,489 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	20,697,613 - 20,697,809	NCBI	Rnor6.0
Rnor_5.0	16	20,553,092 - 20,553,288	UniSTS	Rnor5.0
RGSC_v3.4	16	19,454,045 - 19,454,241	UniSTS	RGSC3.4
Celera	16	19,138,665 - 19,138,861	UniSTS
RH 3.4 Map	16	219.1	UniSTS
Cytogenetic Map	16	p14	UniSTS

AA555564

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	19	27,157,106 - 27,157,155 (+)	MAPPER	mRatBN7.2
mRatBN7.2	16	18,919,438 - 18,919,486 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	20,669,759 - 20,669,806	NCBI	Rnor6.0
Rnor_6.0	19	30,820,088 - 30,820,136	NCBI	Rnor6.0
Rnor_5.0	19	41,725,371 - 41,725,419	UniSTS	Rnor5.0
Rnor_5.0	16	20,525,238 - 20,525,285	UniSTS	Rnor5.0
RGSC_v3.4	16	19,426,189 - 19,426,236	UniSTS	RGSC3.4
RGSC_v3.4	19	29,006,376 - 29,006,424	UniSTS	RGSC3.4
Celera	19	26,674,176 - 26,674,224	UniSTS
Celera	16	19,110,815 - 19,110,862	UniSTS
Cytogenetic Map	16	p14	UniSTS
Cytogenetic Map	19	q11	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_031687	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006252935	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008771146	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039094805	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063275684	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063275685	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC061544	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BP480615	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BP492585	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474031	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ209944	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ210541	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ210904	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ212001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ212205	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ212291	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ212810	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ217153	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ217440	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ218121	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ219376	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ219803	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ221045	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ221118	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ221238	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ221621	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ221631	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ221755	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ221772	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ221777	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ222045	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ222098	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ222371	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ222440	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ222483	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ222507	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ222550	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ222627	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ222700	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ223258	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ223423	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ223456	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ224647	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ224702	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ228362	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ228566	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	U25064	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	U75407	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	X82636	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000027073 ⟹ ENSRNOP00000027073

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	16	20,668,971 - 20,671,127 (+)	Ensembl

RefSeq Acc Id:

NM_031687 ⟹ NP_113875

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,952,624 - 18,954,780 (+)	NCBI
mRatBN7.2	16	18,918,651 - 18,920,807 (+)	NCBI
Rnor_6.0	16	20,668,971 - 20,671,127 (+)	NCBI
Rnor_5.0	16	20,524,450 - 20,526,606 (+)	NCBI
RGSC_v3.4	16	19,425,401 - 19,427,557 (+)	RGD
Celera	16	19,110,027 - 19,112,183 (+)	RGD

Sequence:

show sequence

CCGCTGTCCTCTTTCTCTTCAACGAGGCGGCCGAGCGGCAGACGCCAACATGCAGATCTTCGTG
AAGACCCTGACGGGCAAGACCATCACTCTTGAGGTCGAGCCCAGTGACACCATCGAGAATGTCA
AGGCCAAGATCCAAGACAAGGAAGGCATCCCCCCTGACCAGCAGAGACTGATCTTTGCTGGCAA
ACAGCTGGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAAAGAGTCCACCTTGCACCTG
GTGCTGCGTCTTCGCGGTGGCATCATCGAGCCGTCCCTTCGTCAGCTTGCCCAGAAGTACAACT
GTGACAAGATGATCTGCCGCAAGTGCTACGCACGCCTGCACCCCCGTGCAGTCAACTGCCGCAA
GAAGAAGTGCGGCCACACCAACAACCTGCGCCCCAAGAAGAAGGTCAAATAGAGCTGGGCCATA
CCTGGCCTGTGACCCCGGGACCAAATAAAGTCCCCTTCCATCGACTGGAGCAGTAA

hide sequence

RefSeq Acc Id:

XM_006252935 ⟹ XP_006252997

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,952,749 - 18,954,780 (+)	NCBI
mRatBN7.2	16	18,918,666 - 18,920,807 (+)	NCBI
Rnor_6.0	16	20,668,986 - 20,671,127 (+)	NCBI
Rnor_5.0	16	20,524,450 - 20,526,606 (+)	NCBI

Sequence:

show sequence

TCTTCAACGAGGCGGCCGAGCGGGTTGGTGTTGGCCCCGTCGCTGACGGGCTGGTGGCGCCTGG
GCCGGGGCCGGGATGCGGCGGGAACCGGCGAGGGGACTGTAGGGGTCGCGGGTGCCGCTTCGGC
GTCGCGCATGCTCGGTGGAACTCGACAGCCGGGACCTGGGCGCGCAGCGGGCACGCGGCGGTCC
GACCGGGGAGCTGCGGGCGGAAAGACCAAGAGCTCGGACTTTAACTACAGACAGACGCCAACAT
GCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACTCTTGAGGTCGAGCCCAGTGACACC
ATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCCCCTGACCAGCAGAGACTGA
TCTTTGCTGGCAAACAGCTGGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAAAGAGTC
CACCTTGCACCTGGTGCTGCGTCTTCGCGGTGGCATCATCGAGCCGTCCCTTCGTCAGCTTGCC
CAGAAGTACAACTGTGACAAGATGATCTGCCGCAAGTGCTACGCACGCCTGCACCCCCGTGCAG
TCAACTGCCGCAAGAAGAAGTGCGGCCACACCAACAACCTGCGCCCCAAGAAGAAGGTCAAATA
GAGCTGGGCCATACCTGGCCTGTGACCCCGGGACCAAATAAAGTCCCCTTCCATCGACTGGAGC
AGTAA

hide sequence

RefSeq Acc Id:

XM_008771146 ⟹ XP_008769368

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,952,588 - 18,954,780 (+)	NCBI
mRatBN7.2	16	18,918,614 - 18,920,807 (+)	NCBI
Rnor_6.0	16	20,668,925 - 20,671,127 (+)	NCBI

Sequence:

show sequence

GCTCAGTGCGCAGGCGTCCTGAGAGGAGACTAGGGGGTTTCCGGTTCCGCTGTCCTCTTTCTCT
TCAACGAGGCGGCCGAGCGGACGCCAACATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACC
ATCACTCTTGAGGTCGAGCCCAGTGACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGG
AAGGCATCCCCCCTGACCAGCAGAGACTGATCTTTGCTGGCAAACAGCTGGAGGATGGCCGCAC
CCTGTCCGACTACAACATCCAGAAAGAGTCCACCTTGCACCTGGTGCTGCGTCTTCGCGGTGGC
ATCATCGAGCCGTCCCTTCGTCAGCTTGCCCAGAAGTACAACTGTGACAAGATGATCTGCCGCA
AGTGCTACGCACGCCTGCACCCCCGTGCAGTCAACTGCCGCAAGAAGAAGTGCGGCCACACCAA
CAACCTGCGCCCCAAGAAGAAGGTCAAATAGAGCTGGGCCATACCTGGCCTGTGACCCCGGGAC
CAAATAAAGTCCCCTTCCATCGACTGGAGCAGTAA

hide sequence

RefSeq Acc Id:

XM_039094805 ⟹ XP_038950733

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,952,594 - 18,954,780 (+)	NCBI
mRatBN7.2	16	18,918,651 - 18,920,807 (+)	NCBI

RefSeq Acc Id:

XM_063275684 ⟹ XP_063131754

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,952,583 - 18,954,780 (+)	NCBI

RefSeq Acc Id:

XM_063275685 ⟹ XP_063131755

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,952,853 - 18,954,780 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_113875	(Get FASTA)	NCBI Sequence Viewer
	XP_006252997	(Get FASTA)	NCBI Sequence Viewer
	XP_008769368	(Get FASTA)	NCBI Sequence Viewer
	XP_038950733	(Get FASTA)	NCBI Sequence Viewer
	XP_063131754	(Get FASTA)	NCBI Sequence Viewer
	XP_063131755	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAB19109	(Get FASTA)	NCBI Sequence Viewer
	AAC52495	(Get FASTA)	NCBI Sequence Viewer
	AAH61544	(Get FASTA)	NCBI Sequence Viewer
	CAA57958	(Get FASTA)	NCBI Sequence Viewer
	EDL90694	(Get FASTA)	NCBI Sequence Viewer
	EDL90695	(Get FASTA)	NCBI Sequence Viewer
	EDL90696	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000027073
	ENSRNOP00000027073.3
GenBank Protein	P62986	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_113875 ⟸ NM_031687
- UniProtKB:	Q63446 (UniProtKB/Swiss-Prot), P62989 (UniProtKB/Swiss-Prot), P62986 (UniProtKB/Swiss-Prot), Q6P7R7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE STLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK hide sequence

RefSeq Acc Id:	XP_006252997 ⟸ XM_006252935
- Peptide Label:	isoform X3
- UniProtKB:	Q63446 (UniProtKB/Swiss-Prot), P62989 (UniProtKB/Swiss-Prot), P62986 (UniProtKB/Swiss-Prot), Q6P7R7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE STLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK hide sequence

RefSeq Acc Id:	XP_008769368 ⟸ XM_008771146
- Peptide Label:	isoform X3
- UniProtKB:	Q63446 (UniProtKB/Swiss-Prot), P62989 (UniProtKB/Swiss-Prot), P62986 (UniProtKB/Swiss-Prot), Q6P7R7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE STLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK hide sequence

Ensembl Acc Id:

ENSRNOP00000027073 ⟸ ENSRNOT00000027073

RefSeq Acc Id:	XP_038950733 ⟸ XM_039094805
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063131754 ⟸ XM_063275684
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063131755 ⟸ XM_063275685
- Peptide Label:	isoform X3
- UniProtKB:	Q63446 (UniProtKB/Swiss-Prot), P62989 (UniProtKB/Swiss-Prot), P62986 (UniProtKB/Swiss-Prot), Q6P7R7 (UniProtKB/TrEMBL)

Protein Domains

KxDL Ubiquitin-like

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-P62986-F1-model_v2	AlphaFold	P62986	1-128	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13700028

Promoter ID:

EPDNEW_R10551

Type:

multiple initiation site

Name:

Uba52_1

Description:

ubiquitin A-52 residue ribosomal protein fusion product 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	16	20,668,979 - 20,669,039	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:68344	AgrOrtholog
BioCyc Gene	G2FUF-11784	BioCyc
Ensembl Genes	ENSRNOG00000019971	Ensembl, UniProtKB/Swiss-Prot
	ENSRNOG00000019974	Ensembl
	ENSRNOG00000090524	ENTREZGENE
Ensembl Transcript	ENSRNOT00000027073	ENTREZGENE
	ENSRNOT00000027073.7	UniProtKB/Swiss-Prot
Gene3D-CATH	4.10.1060.50	UniProtKB/Swiss-Prot
	Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:6922034	IMAGE-MGC_LOAD
InterPro	L40e_sf	UniProtKB/Swiss-Prot
	Ribosomal_L40e	UniProtKB/Swiss-Prot
	Ubiquitin	UniProtKB/Swiss-Prot
	Ubiquitin-like_domsf	UniProtKB/Swiss-Prot
	Ubiquitin_CS	UniProtKB/Swiss-Prot
	Ubiquitin_dom	UniProtKB/Swiss-Prot
	Ubiquitin_ubiquitin-like	UniProtKB/Swiss-Prot
KEGG Report	rno:64156	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:72766	IMAGE-MGC_LOAD
NCBI Gene	64156	ENTREZGENE
PANTHER	UBIQUITIN	UniProtKB/Swiss-Prot
Pfam	Ribosomal_L40e	UniProtKB/Swiss-Prot
	ubiquitin	UniProtKB/Swiss-Prot
PhenoGen	Uba52	PhenoGen
PRINTS	UBIQUITIN	UniProtKB/Swiss-Prot
PROSITE	UBIQUITIN_1	UniProtKB/Swiss-Prot
	UBIQUITIN_2	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000019971	RatGTEx
	ENSRNOG00000019974	RatGTEx
	ENSRNOG00000090524	RatGTEx
SMART	Ribosomal_L40e	UniProtKB/Swiss-Prot
	UBQ	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF54236	UniProtKB/Swiss-Prot
TIGR	TC216532
UniProt	A0A8I5ZZ63_RAT	UniProtKB/TrEMBL
	A0A8I6G5G7_RAT	UniProtKB/TrEMBL
	P62986	ENTREZGENE
	P62989	ENTREZGENE
	Q63446	ENTREZGENE
	Q6P7R7	ENTREZGENE, UniProtKB/TrEMBL
	RL40_RAT	UniProtKB/Swiss-Prot
UniProt Secondary	P02248	UniProtKB/Swiss-Prot
	P02249	UniProtKB/Swiss-Prot
	P02250	UniProtKB/Swiss-Prot
	P14793	UniProtKB/Swiss-Prot
	P62989	UniProtKB/Swiss-Prot
	Q29120	UniProtKB/Swiss-Prot
	Q63446	UniProtKB/Swiss-Prot
	Q91887	UniProtKB/Swiss-Prot
	Q91888	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2002-06-10	Uba52	ubiquitin A-52 residue ribosomal protein fusion product 1			Name updated	70584	APPROVED

RGD Curation Notes

Note Type	Note	Reference
gene_physical_interaction	associated with the 60 S ribosomal subunit but not linked to ubiquitin	68210

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

RGD Manual Annotations

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Imported Disease Annotations - ClinVar

RGD Manual Annotations