Gak-ps1 (cyclin G associated kinase, pseudogene 1) - Rat Genome Database

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Gene: Gak-ps1 (cyclin G associated kinase, pseudogene 1) Rattus norvegicus
Analyze
Symbol: Gak-ps1
Name: cyclin G associated kinase, pseudogene 1
RGD ID: 6498838
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: cyclin-G-associated kinase-like; LOC100910338
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8132,124,272 - 2,129,621 (+)NCBIGRCr8
mRatBN7.2132,116,620 - 2,121,609 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.0134,651,876 - 4,666,182 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0134,628,941 - 4,643,249 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera133,079,345 - 3,093,655 (+)NCBICelera
Cytogenetic Map13p13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

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Variants in Gak-ps1
58 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2317027Aia22Adjuvant induced arthritis QTL 222.29joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)13134266636Rat
738036Lnnr4Liver neoplastic nodule remodeling QTL 43.64liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)13142356786Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)131101056920Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)131101056920Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131101056920Rat

Markers in Region
GAK__6772  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.294,087,257 - 4,087,688 (+)MAPPERmRatBN7.2
mRatBN7.2141,163,595 - 1,164,093 (+)MAPPERmRatBN7.2
mRatBN7.2132,121,542 - 2,122,041 (+)MAPPERmRatBN7.2
Rnor_6.0134,656,799 - 4,657,297NCBIRnor6.0
Rnor_6.0142,173,821 - 2,174,318NCBIRnor6.0
Rnor_5.0142,168,440 - 2,168,937UniSTSRnor5.0
Rnor_5.0134,633,864 - 4,634,362UniSTSRnor5.0
Celera141,202,997 - 1,203,494UniSTS
Celera133,084,268 - 3,084,766UniSTS
Cytogenetic Map14p22UniSTS


Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide JAXUCZ010000013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-18739 BioCyc
NCBI Gene LOC100910338 ENTREZGENE
PhenoGen Gak-ps1 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Gak-ps1  cyclin G associated kinase, pseudogene 1  LOC100910338  cyclin-G-associated kinase-like  Symbol and Name Changed 1299863 APPROVED
2012-07-05 LOC100910338  cyclin-G-associated kinase-like      Symbol and Name status set to provisional 70820 PROVISIONAL