Bbip1 (BBSome interacting protein 1) - Rat Genome Database

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Gene: Bbip1 (BBSome interacting protein 1) Rattus norvegicus
Analyze
Symbol: Bbip1
Name: BBSome interacting protein 1
RGD ID: 6498801
Description: Predicted to be involved in cilium assembly and receptor localization to non-motile cilium. Predicted to act upstream of or within several processes, including B cell homeostasis; eating behavior; and erythrocyte homeostasis. Predicted to be located in ciliary membrane and cytoplasm. Predicted to be part of BBSome. Human ortholog(s) of this gene implicated in Bardet-Biedl syndrome 18. Orthologous to human BBIP1 (BBSome interacting protein 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; amphetamine; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: BBSome-interacting protein 1; BBSome-interacting protein 1-like; LOC100910342
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81262,950,459 - 262,964,410 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1262,950,462 - 262,964,394 (-)EnsemblGRCr8
mRatBN7.21252,943,589 - 252,959,512 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1252,945,557 - 252,959,352 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1261,134,632 - 261,148,578 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01267,840,708 - 267,854,654 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01260,496,059 - 260,510,012 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01274,649,085 - 274,663,544 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1274,649,490 - 274,650,363 (-)Ensemblrn6Rnor6.0
Rnor_5.01282,062,613 - 282,076,973 (-)NCBIRnor_5.0Rnor_5.0rn5
Celera1248,659,494 - 248,673,953 (-)NCBICelera
Cytogenetic Map1q55NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
BBSome  (IBA,IEA,ISO)
ciliary membrane  (IEA,ISO)
cytoplasm  (IEA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:19081074   PMID:24316073  


Genomics

Comparative Map Data
Bbip1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81262,950,459 - 262,964,410 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1262,950,462 - 262,964,394 (-)EnsemblGRCr8
mRatBN7.21252,943,589 - 252,959,512 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1252,945,557 - 252,959,352 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1261,134,632 - 261,148,578 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01267,840,708 - 267,854,654 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01260,496,059 - 260,510,012 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01274,649,085 - 274,663,544 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1274,649,490 - 274,650,363 (-)Ensemblrn6Rnor6.0
Rnor_5.01282,062,613 - 282,076,973 (-)NCBIRnor_5.0Rnor_5.0rn5
Celera1248,659,494 - 248,673,953 (-)NCBICelera
Cytogenetic Map1q55NCBI
BBIP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3810110,898,730 - 110,919,366 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl10110,898,730 - 110,919,201 (-)Ensemblhg38GRCh38
GRCh3710112,658,488 - 112,679,124 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3610112,647,496 - 112,669,114 (-)NCBIBuild 36Build 36hg18NCBI36
Celera10106,390,095 - 106,410,721 (-)NCBICelera
Cytogenetic Map10q25.2NCBI
HuRef10106,287,345 - 106,307,970 (-)NCBIHuRef
CHM1_110112,940,312 - 112,960,941 (-)NCBICHM1_1
T2T-CHM13v2.010111,782,514 - 111,803,145 (-)NCBIT2T-CHM13v2.0
Bbip1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391953,918,087 - 53,933,058 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1953,918,292 - 53,933,058 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381953,929,656 - 53,944,627 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1953,929,861 - 53,944,627 (-)Ensemblmm10GRCm38
MGSCv371954,005,024 - 54,018,950 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361954,005,024 - 54,018,950 (-)NCBIMGSCv36mm8
Celera1956,125,502 - 56,139,432 (-)NCBICelera
Cytogenetic Map19D2NCBI
cM Map1948.8NCBI
Bbip1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_004955485518,161 - 530,575 (+)NCBIChiLan1.0ChiLan1.0
BBIP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v28122,779,551 - 122,800,954 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan110122,786,047 - 122,805,722 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v010107,492,010 - 107,512,605 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.110110,941,118 - 110,961,596 (-)NCBIPanPan1.1PanPan1.1panPan2
BBIP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12822,227,965 - 22,242,471 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2822,227,968 - 22,241,316 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2822,380,050 - 22,394,595 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02822,752,514 - 22,767,077 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2822,752,517 - 22,767,025 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12822,311,738 - 22,326,280 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02822,318,522 - 22,333,068 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02822,452,692 - 22,467,248 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Bbip1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721323,838,142 - 23,853,906 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364861,707,366 - 1,724,113 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049364861,707,367 - 1,723,481 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BBIP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl14121,334,760 - 121,348,543 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.114121,327,357 - 121,348,671 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.214132,254,246 - 132,275,675 (-)NCBISscrofa10.2Sscrofa10.2susScr3
BBIP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.19103,836,389 - 103,857,028 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604865,041,564 - 65,062,681 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Bbip1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473735,401,932 - 35,414,093 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462473735,401,223 - 35,413,228 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Bbip1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1253,368,356 - 53,382,566 (-)NCBIRrattus_CSIRO_v1

miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:55
Count of miRNA genes:38
Interacting mature miRNAs:49
Transcripts:ENSRNOT00000074341
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1354580Scort1Serum corticosterone level QTL 13.4blood corticosterone amount (VT:0005345)blood corticosterone level (CMO:0001172)1154961463266453731Rat
634313Niddm43Non-insulin dependent diabetes mellitus QTL 43blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1208479811269633915Rat
1354646Kidm18Kidney mass QTL 185.7kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1160573753266453731Rat
70211Niddm24Non-insulin dependent diabetes mellitus QTL 243.79blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1224633915269633915Rat
724552Glom2Glomerulus QTL 23.30.0001kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)1232312773270518180Rat
1354652Kidm20Kidney mass QTL 204.3kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1186658830266453731Rat
61327Eae7Experimental allergic encephalomyelitis QTL 75.6body mass (VT:0001259)change in body weight (CMO:0002045)1226175591270518180Rat
1578775Iddm21Insulin dependent diabetes mellitus QTL 214.13blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1245782829270518180Rat
1600395Niddm69Non-insulin dependent diabetes mellitus QTL 694.140.0002blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)1205233991267096252Rat
1578763Kidm29Kidney mass QTL 293.30.0001kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1218829748263829748Rat
1354624Cm35Cardiac mass QTL355.7heart left ventricle mass (VT:0007031)calculated heart weight (CMO:0000073)1186658830266453731Rat
1600396Niddm68Non-insulin dependent diabetes mellitus QTL 684.970.0003blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1205233991267096252Rat
631837Niddm35Non-insulin dependent diabetes mellitus QTL 350.01blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1248619887269633915Rat
1600397Edcs4Endometrial carcinoma susceptibility QTL 42.2uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)1176288899270518180Rat
631836Stl31Serum triglyceride level QTL 314.645e-06blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)1247133834270518180Rat
1549837Hcar15Hepatocarcinoma resistance QTL 150.05liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1162548015270518180Rat
1600388Niddm67Non-insulin dependent diabetes mellitus QTL 675.840.000004blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1205233991267096252Rat
1598853Memor3Memory QTL 34.5exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)1152919152268496042Rat
1600390Niddm64Non-insulin dependent diabetes mellitus QTL 640.003blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1257624997270518180Rat
1300108Rf8Renal function QTL 83.75renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)1237995023269633915Rat
734767Niddm57Non-insulin dependent diabetes mellitus QTL 57body mass (VT:0001259)body weight (CMO:0000012)1233480549270108840Rat
1354610Bw34Body weight QTL 344.1body mass (VT:0001259)body weight (CMO:0000012)1160573753266453731Rat
631215Stl8Serum triglyceride level QTL 89.270.0001blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)1234540191270518180Rat
7387289Uae45Urinary albumin excretion QTL 452.860.0021urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1233204160270518180Rat
631843Bw116Body weight QTL 1164.10.016abdominal adipose amount (VT:1000220)abdominal fat pad weight (CMO:0000088)1233480549270108840Rat
731175Uae20Urinary albumin excretion QTL 203.50.0018urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1207163993269633915Rat
1598839Rf56Renal function QTL 56renal blood flow trait (VT:2000006)ratio of change in renal blood flow to change in renal perfusion pressure (CMO:0001239)1255849111270518180Rat
1581544Rf52Renal function QTL 520.05urine total protein amount (VT:0000032)urine protein excretion rate to body weight ratio (CMO:0001099)1241569529269633915Rat
1354661Bw33Body weight QTL 335.2body mass (VT:0001259)body weight (CMO:0000012)1160573753266453731Rat
631536Lnnr2Liver neoplastic nodule remodeling QTL 22.90.0005liver integrity trait (VT:0010547)liver remodeling tumorous lesion number to liver total tumorous lesion number ratio (CMO:0001705)1243953669270518180Rat
734769Niddm58Non-insulin dependent diabetes mellitus QTL 58body mass (VT:0001259)body weight (CMO:0000012)1225108840270108840Rat
738032Hcas5Hepatocarcinoma susceptibility QTL 53.12liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1185857683270518180Rat
2302040Pia35Pristane induced arthritis QTL 353.80.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)1226175591270518180Rat
631669Iddm9Insulin dependent diabetes mellitus QTL 92.80.039blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1233349180270518180Rat
1598821Rf55Renal function QTL 556.3renal blood flow trait (VT:2000006)ratio of change in renal blood flow to change in renal perfusion pressure (CMO:0001239)1228174566270518180Rat
724533Rf51Renal function QTL 515.30.0002kidney plasma flow trait (VT:0005524)renal plasma flow (CMO:0001914)1228180370266453608Rat

Markers in Region
RH144314  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21252,944,762 - 252,944,873 (+)MAPPERmRatBN7.2
Rnor_6.01274,648,692 - 274,648,802NCBIRnor6.0
Rnor_5.01282,062,220 - 282,062,330UniSTSRnor5.0
RGSC_v3.41260,203,321 - 260,203,431UniSTSRGSC3.4
Celera1248,659,101 - 248,659,211UniSTS
RH 3.4 Map11673.2UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 66 165 91 90 59 92 59 6 355 191 11 144 81 92 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001401715 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_003753425 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006223774 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006231621 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017590203 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017590204 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017590205 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017590209 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017590215 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017590390 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017590391 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039101442 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039101443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039101444 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063283705 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063283749 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_590726 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_599278 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC098942 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473986 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215762 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000074341   ⟹   ENSRNOP00000066521
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1262,950,462 - 262,964,394 (-)Ensembl
mRatBN7.2 Ensembl1252,945,557 - 252,959,352 (-)Ensembl
Rnor_6.0 Ensembl1274,649,490 - 274,650,363 (-)Ensembl
RefSeq Acc Id: NM_001401715   ⟹   NP_001388644
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81262,950,459 - 262,964,410 (-)NCBI
mRatBN7.21252,945,156 - 252,959,103 (-)NCBI
RefSeq Acc Id: XM_039101442   ⟹   XP_038957370
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81262,950,459 - 262,963,794 (-)NCBI
mRatBN7.21252,943,670 - 252,959,165 (-)NCBI
RefSeq Acc Id: XM_039101443   ⟹   XP_038957371
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81262,950,459 - 262,963,794 (-)NCBI
mRatBN7.21252,943,589 - 252,952,997 (-)NCBI
RefSeq Acc Id: XM_039101444   ⟹   XP_038957372
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81262,950,459 - 262,958,300 (-)NCBI
mRatBN7.21252,943,589 - 252,952,973 (-)NCBI
RefSeq Acc Id: XM_063283705   ⟹   XP_063139775
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81262,950,459 - 262,963,800 (-)NCBI
RefSeq Acc Id: XM_063283749   ⟹   XP_063139819
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81262,950,459 - 262,955,934 (-)NCBI
Ensembl Acc Id: ENSRNOP00000066521   ⟸   ENSRNOT00000074341
RefSeq Acc Id: XP_038957371   ⟸   XM_039101443
- Peptide Label: isoform X1
- UniProtKB: A6JHW9 (UniProtKB/TrEMBL),   A0A0G2JT03 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038957372   ⟸   XM_039101444
- Peptide Label: isoform X1
- UniProtKB: A6JHW9 (UniProtKB/TrEMBL),   A0A0G2JT03 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038957370   ⟸   XM_039101442
- Peptide Label: isoform X1
- UniProtKB: A6JHW9 (UniProtKB/TrEMBL),   A0A0G2JT03 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001388644   ⟸   NM_001401715
- UniProtKB: A6JHW9 (UniProtKB/TrEMBL),   A0A0G2JT03 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063139775   ⟸   XM_063283705
- Peptide Label: isoform X1
- UniProtKB: A6JHW9 (UniProtKB/TrEMBL),   A0A0G2JT03 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063139819   ⟸   XM_063283749
- Peptide Label: isoform X1
- UniProtKB: A6JHW9 (UniProtKB/TrEMBL),   A0A0G2JT03 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2JT03-F1-model_v2 AlphaFold A0A0G2JT03 1-67 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:6498801 AgrOrtholog
BioCyc Gene G2FUF-55375 BioCyc
Ensembl Genes ENSRNOG00000047019 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000074341 ENTREZGENE
  ENSRNOT00000074341.4 UniProtKB/TrEMBL
InterPro BBIP10 UniProtKB/TrEMBL
NCBI Gene LOC100910342 ENTREZGENE
PANTHER BBSOME-INTERACTING PROTEIN 1 UniProtKB/TrEMBL
  PTHR28596 UniProtKB/TrEMBL
Pfam BBIP10 UniProtKB/TrEMBL
PhenoGen Bbip1 PhenoGen
RatGTEx ENSRNOG00000047019 RatGTEx
UniProt A0A0G2JT03 ENTREZGENE, UniProtKB/TrEMBL
  A6JHW9 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-04-03 Bbip1  BBSome interacting protein 1  LOC100910342  BBSome-interacting protein 1-like  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2012-07-05 LOC100910342  BBSome-interacting protein 1-like      Symbol and Name status set to provisional 70820 PROVISIONAL