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Gene: LOC100911660 (lymphocyte-specific helicase-like) Rattus norvegicus
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Symbol: LOC100911660
Name: lymphocyte-specific helicase-like
RGD ID: 6491699
Description: Predicted to have ATP binding activity. Human ortholog(s) of this gene implicated in immunodeficiency-centromeric instability-facial anomalies syndrome 4. Orthologous to human HELLS (helicase, lymphoid specific).
Type: protein-coding
RefSeq Status: MODEL
Also known as: lymphoid-specific helicase
Orthologs:
No known orthologs. homologs ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Note: LOC100911660 appears to be a duplicate placement of Hells (GeneID: 294071) on Rnor_6.0 (Annot. Release 105) that is absent from Rn_Celera and is not supported by syntenic regions in mouse and human. BLAST analysis of the underlying component AABR07072049.1 against the rat genome shows high sequence identity (99% identity) with part of NC_005100.4 on which Hells is annotated. Annotation of Hells at this location on Rnor_6.0 is supported by annotation on Rn_Celera and synteny with mouse and human. BLAST analysis of LOC100911660 underlying component AABR07072049.1 against Hells underlying component AC083911.11 shows high sequence identity (90% coverage, 99% identity) further supporting duplicate placement of this gene. [10 Mar 2015]
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01257,614,688 - 257,660,184 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1257,614,731 - 257,791,728 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl1257,766,691 - 257,949,183 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01265,106,313 - 265,151,792 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1233,793,070 - 233,838,208 (+)NCBICelera
Cytogenetic Map1q53NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations
References - curated

Genomics

Position Markers
QTLs in Region (Rnor_6.0)

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on LOC100911660
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 6491699
Created: 2012-07-05
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.