Itprip (inositol 1,4,5-trisphosphate receptor interacting protein) - Rat Genome Database

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Gene: Itprip (inositol 1,4,5-trisphosphate receptor interacting protein) Rattus norvegicus
Analyze
Symbol: Itprip
Name: inositol 1,4,5-trisphosphate receptor interacting protein
RGD ID: 6488464
Description: Predicted to enable protein kinase inhibitor activity. Predicted to act upstream of or within negative regulation of extrinsic apoptotic signaling pathway via death domain receptors. Predicted to be located in nuclear outer membrane. Predicted to be active in membrane. Orthologous to human ITPRIP (inositol 1,4,5-trisphosphate receptor interacting protein); INTERACTS WITH 3-chloropropane-1,2-diol; 6-propyl-2-thiouracil; azoxystrobin.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: inositol 1,4,5-trisphosphate receptor-interacting protein-like; LOC100912218
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81256,704,087 - 256,727,661 (-)NCBIGRCr8
mRatBN7.21246,762,804 - 246,786,379 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1246,762,472 - 246,786,408 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1254,890,123 - 254,913,689 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01261,583,120 - 261,606,701 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01254,232,976 - 254,256,534 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01267,649,385 - 267,673,341 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.01271,252,447 - 271,272,169 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1267,651,320 - 267,653,389 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl1271,252,447 - 271,275,989 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01275,081,233 - 275,105,151 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1242,526,571 - 242,546,524 (-)NCBICelera
Cytogenetic Map1q54NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2-hydroxypropanoic acid  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3-chloropropane-1,2-diol  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
6-propyl-2-thiouracil  (EXP)
acrolein  (ISO)
afimoxifene  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
alpha-pinene  (ISO)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
azathioprine  (ISO)
azoxystrobin  (EXP)
benzo[a]pyrene  (ISO)
beta-lapachone  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
Butylbenzyl phthalate  (ISO)
carbon nanotube  (ISO)
chlorpyrifos  (EXP)
chromium(6+)  (ISO)
cisplatin  (ISO)
cobalt dichloride  (ISO)
copper(II) sulfate  (ISO)
crocidolite asbestos  (ISO)
cyclosporin A  (ISO)
DDE  (ISO)
dexamethasone  (ISO)
Dibutyl phosphate  (ISO)
dibutyl phthalate  (ISO)
diethyl phthalate  (ISO)
diisobutyl phthalate  (ISO)
diisononyl phthalate  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
fluoranthene  (ISO)
fulvestrant  (ISO)
gentamycin  (EXP)
glyphosate  (EXP)
imidacloprid  (EXP)
indometacin  (ISO)
leflunomide  (ISO)
methylmercury chloride  (ISO)
ozone  (ISO)
paracetamol  (ISO)
potassium chromate  (ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
quercetin  (ISO)
rac-lactic acid  (ISO)
SB 431542  (ISO)
serpentine asbestos  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (ISO)
sulforaphane  (ISO)
sunitinib  (ISO)
temozolomide  (ISO)
thiabendazole  (EXP)
thioacetamide  (EXP)
thiram  (ISO)
titanium dioxide  (ISO)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
tris(2-butoxyethyl) phosphate  (ISO)
valproic acid  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:19946888   PMID:20053891   PMID:31142202  


Genomics

Comparative Map Data
Itprip
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81256,704,087 - 256,727,661 (-)NCBIGRCr8
mRatBN7.21246,762,804 - 246,786,379 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1246,762,472 - 246,786,408 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1254,890,123 - 254,913,689 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01261,583,120 - 261,606,701 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01254,232,976 - 254,256,534 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01267,649,385 - 267,673,341 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.01271,252,447 - 271,272,169 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1267,651,320 - 267,653,389 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl1271,252,447 - 271,275,989 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01275,081,233 - 275,105,151 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1242,526,571 - 242,546,524 (-)NCBICelera
Cytogenetic Map1q54NCBI
ITPRIP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3810104,309,700 - 104,338,465 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl10104,309,698 - 104,338,465 (-)EnsemblGRCh38hg38GRCh38
GRCh3710106,069,458 - 106,098,223 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3610106,061,889 - 106,083,653 (-)NCBINCBI36Build 36hg18NCBI36
Build 3410106,061,890 - 106,083,653NCBI
Celera1099,812,709 - 99,834,473 (-)NCBICelera
Cytogenetic Map10q25.1NCBI
HuRef1099,701,183 - 99,729,977 (-)NCBIHuRef
CHM1_110106,353,303 - 106,382,108 (-)NCBICHM1_1
T2T-CHM13v2.010105,197,853 - 105,226,599 (-)NCBIT2T-CHM13v2.0
Itprip
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391947,883,029 - 47,907,738 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1947,883,041 - 47,907,738 (-)EnsemblGRCm39 Ensembl
GRCm381947,894,590 - 47,919,323 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1947,894,602 - 47,919,299 (-)EnsemblGRCm38mm10GRCm38
MGSCv371947,969,086 - 47,993,789 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361947,947,911 - 47,972,592 (-)NCBIMGSCv36mm8
Celera1948,655,105 - 48,680,223 (-)NCBICelera
Cytogenetic Map19D1NCBI
cM Map1940.49NCBI
Itprip
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554856,336,790 - 6,359,049 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554856,335,670 - 6,360,757 (+)NCBIChiLan1.0ChiLan1.0
ITPRIP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v28116,198,401 - 116,215,237 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan110116,203,730 - 116,232,717 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v010100,911,715 - 100,938,543 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.110104,368,059 - 104,397,193 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl10104,372,767 - 104,374,410 (-)Ensemblpanpan1.1panPan2
ITPRIP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12816,613,934 - 16,638,058 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2816,777,662 - 16,810,220 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02817,083,435 - 17,115,964 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.12816,630,989 - 16,663,461 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02816,659,631 - 16,692,168 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02816,798,322 - 16,830,859 (-)NCBIUU_Cfam_GSD_1.0
Itprip
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721330,271,144 - 30,294,808 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366001,895,714 - 1,897,384 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366001,874,696 - 1,898,033 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ITPRIP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl14115,252,791 - 115,277,654 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.114115,243,035 - 115,278,137 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.214125,221,987 - 125,246,701 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ITPRIP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1997,362,766 - 97,384,115 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604858,483,619 - 58,507,504 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Itprip
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248313,383,623 - 3,385,275 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248313,381,920 - 3,403,903 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Itprip
152 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:47
Count of miRNA genes:43
Interacting mature miRNAs:46
Transcripts:ENSRNOT00000075570
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1354580Scort1Serum corticosterone level QTL 13.4blood corticosterone amount (VT:0005345)blood corticosterone level (CMO:0001172)1156677124256448636Rat
634313Niddm43Non-insulin dependent diabetes mellitus QTL 43blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1199050459259647894Rat
1549910Bw54Body weight QTL 540.05body mass (VT:0001259)body weight (CMO:0000012)1214647894259647894Rat
1578778Pur4Proteinuria QTL 43.30.003urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)1150700247252085048Rat
1354646Kidm18Kidney mass QTL 185.7kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1151162512256448636Rat
70211Niddm24Non-insulin dependent diabetes mellitus QTL 243.79blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1214647894259647894Rat
1357399Bw45Body weight QTL 453.05body mass (VT:0001259)body mass index (BMI) (CMO:0000105)1206329708251329708Rat
724552Glom2Glomerulus QTL 23.30.0001kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)1222363780260522016Rat
631690Scl5Serum cholesterol level QTL 52.1blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)1236125214260522016Rat
1354652Kidm20Kidney mass QTL 204.3kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1177227632256448636Rat
1357404Bw42Body weight QTL 424.490.0001body mass (VT:0001259)body weight (CMO:0000012)1206329708251329708Rat
2302378Insul11Insulin level QTL 113.25blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1144267353251128347Rat
10053715Scort24Serum corticosterone level QTL 242.130.0088blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)1221414816260522016Rat
61327Eae7Experimental allergic encephalomyelitis QTL 75.6body mass (VT:0001259)change in body weight (CMO:0002045)1216255568260522016Rat
1600392Bw123Body weight QTL 1230.001body mass (VT:0001259)body weight (CMO:0000012)1223201027260522016Rat
1578763Kidm29Kidney mass QTL 293.30.0001kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1179567751260522016Rat
1600395Niddm69Non-insulin dependent diabetes mellitus QTL 694.140.0002blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)1195804352257091168Rat
1354624Cm35Cardiac mass QTL355.7heart left ventricle mass (VT:0007031)calculated heart weight (CMO:0000073)1177227632256448636Rat
1600396Niddm68Non-insulin dependent diabetes mellitus QTL 684.970.0003blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1195804352257091168Rat
631837Niddm35Non-insulin dependent diabetes mellitus QTL 350.01blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1238699859259647894Rat
1600397Edcs4Endometrial carcinoma susceptibility QTL 42.2uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)1206081677251081677Rat
631836Stl31Serum triglyceride level QTL 314.645e-06blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)1237147813260522016Rat
1549837Hcar15Hepatocarcinoma resistance QTL 150.05liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1153136852260522016Rat
10059587Bw173Body weight QTL 1733.230.025body mass (VT:0001259)body weight (CMO:0000012)1202069611247069611Rat
1600388Niddm67Non-insulin dependent diabetes mellitus QTL 675.840.000004blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1195804352257091168Rat
1578759Uae30Urinary albumin excretion QTL 303.30.003urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1150700247252085048Rat
1300108Rf8Renal function QTL 83.75renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)1228581588259647894Rat
734767Niddm57Non-insulin dependent diabetes mellitus QTL 57body mass (VT:0001259)body weight (CMO:0000012)1224054293260122809Rat
1354610Bw34Body weight QTL 344.1body mass (VT:0001259)body weight (CMO:0000012)1151162512256448636Rat
631215Stl8Serum triglyceride level QTL 89.270.0001blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)1225126575260522016Rat
7387289Uae45Urinary albumin excretion QTL 452.860.0021urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1223262787260522016Rat
631843Bw116Body weight QTL 1164.10.016abdominal adipose amount (VT:1000220)abdominal fat pad weight (CMO:0000088)1224054293260122809Rat
731175Uae20Urinary albumin excretion QTL 203.50.0018urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1221264111259647894Rat
1598839Rf56Renal function QTL 56renal blood flow trait (VT:2000006)ratio of change in renal blood flow to change in renal perfusion pressure (CMO:0001239)1245907761257976495Rat
1581544Rf52Renal function QTL 520.05urine total protein amount (VT:0000032)urine protein excretion rate to body weight ratio (CMO:0001099)1232156370259647894Rat
1354661Bw33Body weight QTL 335.2body mass (VT:0001259)body weight (CMO:0000012)1151162512256448636Rat
724538Kidm1Kidney mass QTL 13.2kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1213707201252085212Rat
724531Uae5Urinary albumin excretion QTL 54urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)1150700142252085212Rat
631536Lnnr2Liver neoplastic nodule remodeling QTL 22.90.0005liver integrity trait (VT:0010547)liver remodeling tumorous lesion number to liver total tumorous lesion number ratio (CMO:0001705)1233948574260522016Rat
734769Niddm58Non-insulin dependent diabetes mellitus QTL 58body mass (VT:0001259)body weight (CMO:0000012)1224569538260122809Rat
738032Hcas5Hepatocarcinoma susceptibility QTL 53.12liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1176426412257976495Rat
734768Niddm59Non-insulin dependent diabetes mellitus QTL 59body mass (VT:0001259)body weight (CMO:0000012)1213843987258843987Rat
2302040Pia35Pristane induced arthritis QTL 353.80.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)1216255568260522016Rat
631669Iddm9Insulin dependent diabetes mellitus QTL 92.80.039blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1233190394258625266Rat
1598821Rf55Renal function QTL 556.3renal blood flow trait (VT:2000006)ratio of change in renal blood flow to change in renal perfusion pressure (CMO:0001239)1218748008257976495Rat
1358890Bp259Blood pressure QTL 2593.06arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1210702053260522016Rat
724533Rf51Renal function QTL 515.30.0002kidney plasma flow trait (VT:0005524)renal plasma flow (CMO:0001914)1218753816256448513Rat

Markers in Region
BI290337  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21246,786,497 - 246,786,667 (+)MAPPERmRatBN7.2
Rnor_6.01271,276,144 - 271,276,313NCBIRnor6.0
Rnor_6.01267,673,082 - 267,673,251NCBIRnor6.0
Rnor_5.01278,704,053 - 278,704,222UniSTSRnor5.0
Rnor_5.01275,104,930 - 275,105,099UniSTSRnor5.0
RGSC_v3.41253,307,737 - 253,307,906UniSTSRGSC3.4
Celera1242,550,499 - 242,550,668UniSTS
RH 3.4 Map11623.4UniSTS
Cytogenetic Map1q54UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
17 11 55 145 129 127 72 49 72 12 292 140 112 55 87 55

Sequence


Ensembl Acc Id: ENSRNOT00000075570   ⟹   ENSRNOP00000067995
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1246,762,836 - 246,782,200 (-)Ensembl
Rnor_6.0 Ensembl1271,252,447 - 271,275,989 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000081605   ⟹   ENSRNOP00000070524
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1246,762,472 - 246,786,408 (-)Ensembl
Rnor_6.0 Ensembl1271,254,381 - 271,256,379 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000082550   ⟹   ENSRNOP00000072030
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1267,651,320 - 267,653,389 (-)Ensembl
RefSeq Acc Id: NM_001401757   ⟹   NP_001388686
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81256,704,087 - 256,727,661 (-)NCBI
mRatBN7.21246,762,804 - 246,786,379 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001388686 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000067995.1
  ENSRNOP00000070524.1
Ensembl Acc Id: ENSRNOP00000072030   ⟸   ENSRNOT00000082550
Ensembl Acc Id: ENSRNOP00000067995   ⟸   ENSRNOT00000075570
Ensembl Acc Id: ENSRNOP00000070524   ⟸   ENSRNOT00000081605
RefSeq Acc Id: NP_001388686   ⟸   NM_001401757
- Peptide Label: precursor
- UniProtKB: A0A096MJ54 (UniProtKB/TrEMBL)
Protein Domains
Mab-21-like HhH/H2TH-like

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A096MJ54-F1-model_v2 AlphaFold A0A096MJ54 1-557 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13690986
Promoter ID:EPDNEW_R1508
Type:multiple initiation site
Name:LOC100912218_1
Description:inositol 1,4,5-trisphosphate receptor-interacting protein-like
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01271,275,983 - 271,276,043EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:6488464 AgrOrtholog
BioCyc Gene G2FUF-55461 BioCyc
Ensembl Genes ENSRNOG00000046036 Ensembl, UniProtKB/TrEMBL
  ENSRNOG00000053771 Ensembl
Ensembl Transcript ENSRNOT00000075570.3 UniProtKB/TrEMBL
  ENSRNOT00000081605.2 UniProtKB/TrEMBL
Gene3D-CATH 1.10.1410.40 UniProtKB/TrEMBL
  3.30.460.90 UniProtKB/TrEMBL
InterPro ITPRIP_fam UniProtKB/TrEMBL
  Mab-21_dom UniProtKB/TrEMBL
  Mab-21_HhH/H2TH-like UniProtKB/TrEMBL
NCBI Gene LOC100912218 ENTREZGENE
PANTHER CELL FATE DETERMINING PROTEIN MAB21-RELATED UniProtKB/TrEMBL
  PTHR10656:SF8 UniProtKB/TrEMBL
Pfam Mab-21_C UniProtKB/TrEMBL
PhenoGen Itprip PhenoGen
PRINTS INOS145TPRIP UniProtKB/TrEMBL
RatGTEx ENSRNOG00000046036 RatGTEx
  ENSRNOG00000053771 RatGTEx
SMART Mab-21 UniProtKB/TrEMBL
UniProt A0A096MJ54 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-04-17 Itprip  inositol 1,4,5-trisphosphate receptor interacting protein  LOC100912218  inositol 1,4,5-trisphosphate receptor-interacting protein-like  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2012-07-05 LOC100912218  inositol 1,4,5-trisphosphate receptor-interacting protein-like      Symbol and Name status set to provisional 70820 PROVISIONAL