Cant1 (calcium activated nucleotidase 1) - Rat Genome Database

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Gene: Cant1 (calcium activated nucleotidase 1) Rattus rattus
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Symbol: Cant1
Name: calcium activated nucleotidase 1
RGD ID: 626155355
Description: ENCODES a protein that exhibits ADP phosphatase activity (ortholog); calcium ion binding (ortholog); GDP phosphatase activity (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); proteoglycan biosynthetic process (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; dihydropyrimidinase deficiency pathway; Glut1 deficiency syndrome pathway; ASSOCIATED WITH Bone Fragility with Contractures, Arterial Rupture, and Deafness (ortholog); Desbuquois dysplasia (ortholog); Desbuquois Dysplasia 1 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog); membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: soluble calcium-activated nucleotidase 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Rrattus_CSIRO_v1 - Rrattus_CSIRO_v1 Assembly
Position:
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1965,647,889 - 65,657,437 (+)NCBIRrattus_CSIRO_v1



Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Cant1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1965,647,889 - 65,657,437 (+)NCBIRrattus_CSIRO_v1
CANT1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381778,991,716 - 79,009,764 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1778,991,707 - 79,009,867 (-)Ensemblhg38GRCh38
GRCh371776,987,798 - 77,005,846 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361774,499,394 - 74,517,433 (-)NCBIBuild 36Build 36hg18NCBI36
Build 341774,499,393 - 74,517,433NCBI
Celera1773,585,975 - 73,604,118 (-)NCBICelera
Cytogenetic Map17q25.3NCBI
HuRef1772,408,348 - 72,414,909 (-)NCBIHuRef
CHM1_11777,051,715 - 77,069,816 (-)NCBICHM1_1
T2T-CHM13v2.01779,886,485 - 79,904,693 (-)NCBIT2T-CHM13v2.0
Cant1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911118,297,115 - 118,309,971 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11118,297,115 - 118,309,912 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm3811118,406,289 - 118,419,134 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11118,406,289 - 118,419,086 (-)Ensemblmm10GRCm38
MGSCv3711118,267,603 - 118,280,366 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv3611118,222,379 - 118,235,142 (-)NCBIMGSCv36mm8
Celera11130,151,661 - 130,164,477 (-)NCBICelera
Cytogenetic Map11E2NCBI
cM Map1183.15NCBI
Cant1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr810104,135,676 - 104,148,854 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl10104,135,682 - 104,148,698 (-)EnsemblGRCr8
mRatBN7.210103,637,079 - 103,650,240 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl10103,531,504 - 103,650,109 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx10108,737,622 - 108,750,771 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.010108,200,770 - 108,213,920 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.010103,557,779 - 103,570,797 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.010107,432,500 - 107,445,634 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl10107,432,506 - 107,445,522 (-)Ensemblrn6Rnor6.0
Rnor_5.010107,067,498 - 107,080,632 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.410108,405,355 - 108,420,225 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera10102,197,201 - 102,210,219 (-)NCBICelera
RGSC_v3.110108,419,858 - 108,434,729 (-)NCBI
Cytogenetic Map10q32.3NCBI
Cant1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555063,713,277 - 3,722,390 (+)Ensembl
ChiLan1.0NW_0049555063,707,028 - 3,722,339 (+)NCBIChiLan1.0ChiLan1.0
CANT1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21995,040,674 - 95,059,450 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11799,870,738 - 99,889,512 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01773,068,196 - 73,086,900 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11778,612,406 - 78,626,174 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1778,614,244 - 78,618,317 (-)EnsemblpanPan2panpan1.1
CANT1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.192,428,107 - 2,460,097 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha93,086,771 - 3,118,474 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.093,080,257 - 3,112,283 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl93,077,586 - 3,188,537 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.193,102,660 - 3,134,628 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.093,238,826 - 3,260,399 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.093,309,334 - 3,341,308 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Cant1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244056023,086,869 - 3,093,499 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365943,318,425 - 3,332,973 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365943,318,460 - 3,325,677 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CANT1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl123,188,626 - 3,204,488 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1123,188,622 - 3,207,014 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
CANT1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11670,961,172 - 70,979,915 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1670,960,301 - 70,979,857 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366607742,171,445 - 42,236,048 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cant1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248018,326,220 - 8,341,240 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046248018,326,928 - 8,341,231 (-)NCBIHetGla 1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_032912902 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAAIVD010000002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_032912902   ⟹   XP_032768793
Type: CODING
Position:
Black Rat AssemblyChrPosition (strand)Source
Rrattus_CSIRO_v1965,647,889 - 65,657,437 (+)NCBI
Protein Sequences
Protein RefSeqs XP_032768793 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_032768793   ⟸   XM_032912902


Additional Information

Database Acc Id Source(s)
NCBI Gene Cant1 ENTREZGENE