Pla2g5 (phospholipase A2, group V) - Rat Genome Database

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Gene: Pla2g5 (phospholipase A2, group V) Mus musculus
Analyze
Symbol: Pla2g5
Name: phospholipase A2, group V
RGD ID: 62343
MGI Page MGI
Description: Enables phospholipase A2 activity and signaling receptor binding activity. Involved in several processes, including arachidonate secretion; low-density lipoprotein particle remodeling; and positive regulation of immune effector process. Acts upstream of or within negative regulation of inflammatory response and regulation of macrophage activation. Located in cell surface; early phagosome; and phagolysosome. Is expressed in several structures, including central nervous system; ear; genitourinary system; liver; and peripheral nervous system ganglion. Human ortholog(s) of this gene implicated in familial benign fleck retina. Orthologous to human PLA2G5 (phospholipase A2 group V).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: calcium-dependent phospholipase A2; group V phospholipase A2; phosphatidylcholine 2-acylhydrolase 5; phospholipase A2 group V; PLA2; PLA2-10; s; sPLA2
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394138,526,558 - 138,590,784 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4138,526,555 - 138,590,793 (-)EnsemblGRCm39 Ensembl
GRCm384138,799,247 - 138,863,562 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4138,799,244 - 138,863,482 (-)EnsemblGRCm38mm10GRCm38
MGSCv374138,355,162 - 138,419,384 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364138,071,333 - 138,091,286 (-)NCBIMGSCv36mm8
Celera4140,584,350 - 140,649,745 (-)NCBICelera
Cytogenetic Map4D3NCBI
cM Map470.57NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
17beta-estradiol 3-benzoate  (ISO)
17beta-hydroxy-5alpha-androstan-3-one  (ISO)
2,2',5,5'-tetrachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-amino-2-deoxy-D-glucopyranose  (ISO)
5-aza-2'-deoxycytidine  (ISO)
6-propyl-2-thiouracil  (EXP,ISO)
aflatoxin B1  (ISO)
aldehydo-D-glucosamine  (ISO)
ammonium chloride  (ISO)
arachidonic acid  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
atrazine  (ISO)
benazepril  (ISO)
benzalkonium chloride  (EXP)
benzo[a]pyrene  (EXP,ISO)
benzo[e]pyrene  (ISO)
beta-D-glucosamine  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
CGP 52608  (ISO)
choline  (EXP)
cisplatin  (EXP)
clofibrate  (EXP)
Cuprizon  (ISO)
dibutyl phthalate  (EXP,ISO)
diiodine  (EXP)
doxorubicin  (EXP,ISO)
enzalutamide  (ISO)
epoxiconazole  (EXP)
ethanol  (EXP)
folic acid  (EXP)
formaldehyde  (ISO)
gentamycin  (ISO)
glycidol  (ISO)
hydrogen peroxide  (EXP,ISO)
icosanoid  (EXP)
isoliquiritigenin  (ISO)
L-methionine  (EXP)
lead diacetate  (ISO)
leukotriene C4  (EXP,ISO)
lipopolysaccharide  (ISO)
methamphetamine  (ISO)
methapyrilene  (ISO)
N-formyl-L-methionyl-L-leucyl-L-phenylalanine  (ISO)
N-nitrosodiethylamine  (EXP)
naphthalene  (EXP)
paracetamol  (EXP,ISO)
PCB138  (ISO)
pentanal  (ISO)
peptidoglycan  (EXP)
piperonyl butoxide  (EXP)
progesterone  (EXP,ISO)
propanal  (ISO)
prostaglandin E2  (EXP)
rotenone  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
sarin  (ISO)
silicon dioxide  (ISO)
tert-butyl hydroperoxide  (EXP)
testosterone  (ISO)
titanium dioxide  (EXP)
trichloroethene  (ISO)
trimellitic anhydride  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. MGD IEA MGD IEA
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
6. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
7. Mouse MP Annotation Import Pipeline RGD automated import pipeline
8. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. On the diversity of secreted phospholipases A(2). Cloning, tissue distribution, and functional expression of two novel mouse group II enzymes. Valentin E, etal., J Biol Chem 1999 Oct 29;274(44):31195-202.
Additional References at PubMed
PMID:8175726   PMID:8824228   PMID:8827514   PMID:8838795   PMID:8943302   PMID:9153207   PMID:9288104   PMID:10349636   PMID:10512203   PMID:10531350   PMID:11042159   PMID:11076861  
PMID:11217851   PMID:11830583   PMID:12050136   PMID:12477932   PMID:12676927   PMID:12963740   PMID:14610273   PMID:14681479   PMID:14761945   PMID:14962950   PMID:15840001   PMID:16141072  
PMID:16141073   PMID:16150819   PMID:16407308   PMID:17008322   PMID:17064958   PMID:17204667   PMID:17369491   PMID:17878379   PMID:18287559   PMID:18825749   PMID:19056705   PMID:19115385  
PMID:19164803   PMID:19265167   PMID:19286925   PMID:19342668   PMID:20138782   PMID:20232296   PMID:20432503   PMID:20817863   PMID:21169294   PMID:21262967   PMID:21266581   PMID:21267068  
PMID:21277885   PMID:21530210   PMID:21677750   PMID:21849511   PMID:21873635   PMID:21880721   PMID:22067043   PMID:22813854   PMID:23451035   PMID:23525785   PMID:23624557   PMID:23650617  
PMID:24910243   PMID:25347447   PMID:26820468   PMID:26828067   PMID:27226632   PMID:28825176   PMID:29346348   PMID:29798841   PMID:31730773   PMID:32482892   PMID:33383652   PMID:34359901  
PMID:37490917   PMID:38361249   PMID:39002541   PMID:39738558  


Genomics

Comparative Map Data
Pla2g5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394138,526,558 - 138,590,784 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4138,526,555 - 138,590,793 (-)EnsemblGRCm39 Ensembl
GRCm384138,799,247 - 138,863,562 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4138,799,244 - 138,863,482 (-)EnsemblGRCm38mm10GRCm38
MGSCv374138,355,162 - 138,419,384 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364138,071,333 - 138,091,286 (-)NCBIMGSCv36mm8
Celera4140,584,350 - 140,649,745 (-)NCBICelera
Cytogenetic Map4D3NCBI
cM Map470.57NCBI
PLA2G5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38120,028,408 - 20,091,911 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl120,028,179 - 20,091,911 (+)EnsemblGRCh38hg38GRCh38
GRCh37120,396,687 - 20,418,404 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36120,269,288 - 20,290,981 (+)NCBINCBI36Build 36hg18NCBI36
Build 34120,142,143 - 20,162,959NCBI
Celera118,719,822 - 18,741,514 (+)NCBICelera
Cytogenetic Map1p36.13NCBI
HuRef118,642,531 - 18,664,224 (+)NCBIHuRef
CHM1_1120,506,410 - 20,528,103 (+)NCBICHM1_1
T2T-CHM13v2.0119,852,033 - 19,915,547 (+)NCBIT2T-CHM13v2.0
Pla2g5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85156,324,628 - 156,393,065 (-)NCBIGRCr8
mRatBN7.25151,041,339 - 151,109,433 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5151,041,340 - 151,062,658 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5153,738,735 - 153,760,037 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05155,513,041 - 155,534,343 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05155,495,070 - 155,516,077 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05157,247,601 - 157,268,968 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5157,247,781 - 157,268,903 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05160,988,968 - 161,030,066 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45157,619,703 - 157,640,971 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15157,629,741 - 157,651,010 (-)NCBI
Celera5149,429,045 - 149,450,195 (-)NCBICelera
Cytogenetic Map5q36NCBI
Pla2g5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955452710,271 - 723,142 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955452662,281 - 721,507 (+)NCBIChiLan1.0ChiLan1.0
PLA2G5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21207,027,174 - 207,048,964 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11206,144,002 - 206,165,768 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0118,983,104 - 19,046,834 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1120,026,361 - 20,089,840 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl120,068,110 - 20,089,840 (+)Ensemblpanpan1.1panPan2
PLA2G5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1278,762,851 - 78,781,642 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl278,762,852 - 78,781,983 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha275,276,435 - 75,295,216 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0279,329,011 - 79,347,745 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl279,329,015 - 79,347,767 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1276,148,347 - 76,167,055 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0277,154,883 - 77,173,638 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0278,225,847 - 78,234,080 (-)NCBIUU_Cfam_GSD_1.0
Pla2g5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505840,307,140 - 40,326,035 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364746,131,884 - 6,150,819 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364746,131,915 - 6,150,810 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PLA2G5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl678,302,062 - 78,376,220 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1678,365,697 - 78,376,383 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2672,541,431 - 72,565,649 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PLA2G5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120112,465,341 - 112,487,082 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl20112,464,033 - 112,487,089 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660333,696,670 - 3,719,131 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pla2g5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247645,196,215 - 5,207,232 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247645,196,215 - 5,207,138 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Pla2g5
4621 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:2607
Count of miRNA genes:607
Interacting mature miRNAs:761
Transcripts:ENSMUST00000030524, ENSMUST00000102511, ENSMUST00000102512, ENSMUST00000102513, ENSMUST00000127183, ENSMUST00000136393, ENSMUST00000140100, ENSMUST00000140117, ENSMUST00000154844
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301267Bcmd2_mB cell maturation defect 2 (mouse)Not determined4133154678150789451Mouse
4142139Adip12_madiposity 12 (mouse)Not determined4124621281156860686Mouse
10047132Albq19_malbuminuria QTL 19 (mouse)Not determined4112824389146824389Mouse
1301525Lmb1_mlupus in MRL and B6 F2 cross (mouse)Not determined4124264957150676858Mouse
14746982Manh56_mmandible shape 56 (mouse)4117815917151815917Mouse
4141623W6q13_mweight 6 weeks QTL 13 (mouse)Not determined88982069140468203Mouse
12910797Pwgrq4_mpre-weaning growth rate QTL 4 (mouse)4105835310141433838Mouse
25314312Syncl2_msynaptonemal complex length 2 (mouse)465718237146584457Mouse
12910794Pwbwq8_mpost-weaning body weight QTL 8 (mouse)4105835310141433838Mouse
1300743Skull6_mskull morphology 6 (mouse)Not determined4111009051145009280Mouse
1301382Arvm2_mautoimmune renal vasculitis 2 (mouse)Not determined4107791564141791756Mouse
1302149Tlsr2_mthymic lymphoma suppressor region 2 (mouse)Not determined4124264957142230960Mouse
12910813Pwbwq4_mpre-weaning body weight QTL 4 (mouse)4105835310141433838Mouse
1300874Gasa2_mgastritis type A susceptibility locus 2 (mouse)Not determined4133010494156860686Mouse
4141093W3q17_mweight 3 weeks QTL 17 (mouse)Not determined88982069140468203Mouse
27226757Femd1_mfemur midshaft diameter 1, 5 week (mouse)4123993793144326570Mouse
12910808Pwbwq9_mpost-weaning body weight QTL 9 (mouse)4105835310141433838Mouse
1300621Tpnr1_mthermal pain response 1 (mouse)Not determined4125230872156860686Mouse
11567249Elorr3_methanol induced loss of righting response 3 (mouse)43722677156268235Mouse
4142493Femwf13_mfemur work to failure 13 (mouse)Not determined116154678150154782Mouse
1301815Sles2_msystemic lupus erythmatosus suppressor 2 (mouse)Not determined494957579150676858Mouse
1300663Start2_mstartle response 2 (mouse)Not determined4107264957141265153Mouse
1300917Gasa1_mgastritis type A susceptibility locus 1 (mouse)Not determined4124055093142438020Mouse
1300537Ap3q_malcohol preference 3 QTL (mouse)Not determined4134654451156860686Mouse
1301823Bmd7_mbone mineral density 7 (mouse)Not determined488982069151654550Mouse
10412210Cypr6_mcytokine production 6 (mouse)Not determined4120617848154617995Mouse
1302078Sluc21_msusceptibility to lung cancer 21 (mouse)Not determined4117401141151401275Mouse
10045620Heal22_mwound healing/regeneration 22 (mouse)Not determined4125230872156860686Mouse
4142481Gct1_mgranulosa cell tumorigenesis 1 (mouse)Not determined4127784226156860686Mouse
4141065Shali2_msurvival time to hyperoxic acute lung injury 2 (mouse)Not determined124055093141572792Mouse
13503348Bntq18_mbone traits QTL 18 (mouse)4120617848154617995Mouse
13208562Wght7_mweight 7 (mouse)490888237148084457Mouse
1300781Lith8_mlithogenic gene 8 (mouse)Not determined4107264957141265153Mouse
4141184Tb2r1_mTGF-beta2 responsiveness 1 (mouse)Not determined137674005150676858Mouse
39128212Lwq21_mliver weight QTL 21 (mouse)488982069140468203Mouse
4142077Ignpq2_mIgA nephropathy QTL 2 (mouse)Not determined4133676733156860686Mouse
4141180Ssic1_msusceptibility to small intestinal cancer 1 (mouse)Not determined120674005154674151Mouse
1301584Lrdg2_mlight induced retinal degeneration 2 (mouse)Not determined4129465811151654550Mouse
1302102Bis1_mbeta-carboline-induced seizures 1 (mouse)Not determined4119864433153864536Mouse
10043996Gct5_mgranulosa cell tumorigenesis 5 (mouse)Not determined4127784226156860686Mouse
26884445Sklq7_mskull length QTL 7, 10 week (mouse)468018237150884457Mouse
10043985Stheal12_msoft tissue heal 12 (mouse)Not determined4121342649155342753Mouse
1357534Cinda3_mcytokine induced activation 3 (mouse)Not determined4137617848142289472Mouse
1301982Pltiq1_mphospholipid transfer protein inducibility QTL 1 (mouse)Not determined4124621281156860686Mouse
26884437Sklq13_mskull length QTL 13, 16 week (mouse)457700000155684457Mouse
1300803Sluc6_msusceptibility to lung cancer 6 (mouse)Not determined4120674005154674151Mouse
4141549W10q10_mweight 10 weeks QTL 10 (mouse)Not determined88982069140468203Mouse
4142061Chlq16_mcirculating hormone level QTL 16 (mouse)Not determined4121342649155342753Mouse
1300933Cdcs9_mcytokine deficiency colitis susceptibility 9 (mouse)Not determined4125230872156860686Mouse
1300809Ccrs2_mcorpus callosum hemisphere surface size 2 (mouse)Not determined4107264957141265153Mouse
1300553Athsq1_matherosclerosis susceptibility QTL 1 (mouse)Not determined4137617848151654550Mouse
4141154Nba1_mNew Zealand Black autoimmunity 1 (mouse)Not determined131650724140879275Mouse
1301964Bw8q2_mbody weight at 8 weeks QTL 2 (mouse)Not determined4119864433153864536Mouse
1301452Elsgp1_melevated serum gp70 1 (mouse)Not determined4121342649155342753Mouse
10755520Rbc1_mred blood cell count 1 (mouse)4108477692142477692Mouse
10755521Hct1_mhematocrit 1 (mouse)4108477692142477692Mouse
10755522Hgb1_mhemoglobin 1 (mouse)4108477692142477692Mouse
1301108Scon2_msucrose consumption 2 (mouse)Not determined4134654451156860686Mouse
1300858Tafat_mtally ho associated mesenteric fat pad weight (mouse)Not determined4124621281156860686Mouse
10755531Lymph3_mlymphocyte differential 3 (mouse)4124553483156860686Mouse
15039382Ltgq7_mliver triglyceride QTL 7 (mouse)4105705794139705794Mouse
11533916Mts1_mmammary tumor susceptibility 1 (mouse)4125289325156860686Mouse
15039377Bw45_mbody weight QTL 45 (mouse)4105705794139705794Mouse
1300839Dyscalc2_mdystrophic cardiac calcinosis 2 (mouse)Not determined4111009051145009280Mouse
4141001Tgq17_mtriglyceride QTL 17 (mouse)Not determined112523489146523489Mouse
15039378Adip30_madiposity 30 (mouse)4105705794139705794Mouse
1357800Tgq3_mtriglyceride QTL 3 (mouse)Not determined4107055093141055180Mouse
15039385Mvlq3_mmacrovesicular liver lesion QTL 3 (mouse)4112182386146182386Mouse

Markers in Region
AW743154  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm384138,800,351 - 138,800,610UniSTSGRCm38
MGSCv374138,356,266 - 138,356,525UniSTSGRCm37
Celera4140,585,453 - 140,585,712UniSTS
Cytogenetic Map4D3UniSTS
cM Map468.0UniSTS
Whitehead/MRC_RH41814.74UniSTS
BB273932  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm384138,799,341 - 138,799,484UniSTSGRCm38
MGSCv374138,355,256 - 138,355,399UniSTSGRCm37
Celera4140,584,444 - 140,584,587UniSTS
Cytogenetic Map4D3UniSTS
cM Map468.0UniSTS
Whitehead/MRC_RH41815.18UniSTS
PMC22985P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm384138,832,996 - 138,833,289UniSTSGRCm38
MGSCv374138,388,911 - 138,389,204UniSTSGRCm37
Celera4140,619,331 - 140,619,624UniSTS
Cytogenetic Map4D3UniSTS
cM Map468.0UniSTS
cM Map468.0UniSTS
Pla2g2a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm384138,832,902 - 138,833,377UniSTSGRCm38
MGSCv374138,388,817 - 138,389,292UniSTSGRCm37
Celera4140,619,237 - 140,619,712UniSTS
Cytogenetic Map4D3UniSTS
cM Map468.0UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001122954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001424807 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001424808 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001429587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001429591 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_011110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_188945 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006538658 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017320044 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036163835 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF162713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK090021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK157266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK161336 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL844178 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC030899 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY012884 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY015217 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CK384107 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U66873 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000030524   ⟹   ENSMUSP00000030524
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4138,526,560 - 138,590,780 (-)Ensembl
GRCm38.p6 Ensembl4138,799,249 - 138,863,469 (-)Ensembl
Ensembl Acc Id: ENSMUST00000102511   ⟹   ENSMUSP00000099569
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4138,527,664 - 138,539,476 (-)Ensembl
GRCm38.p6 Ensembl4138,800,353 - 138,812,165 (-)Ensembl
Ensembl Acc Id: ENSMUST00000102512   ⟹   ENSMUSP00000099570
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4138,526,555 - 138,546,566 (-)Ensembl
GRCm38.p6 Ensembl4138,799,244 - 138,819,255 (-)Ensembl
Ensembl Acc Id: ENSMUST00000102513   ⟹   ENSMUSP00000099571
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4138,526,555 - 138,590,793 (-)Ensembl
GRCm38.p6 Ensembl4138,799,244 - 138,863,482 (-)Ensembl
Ensembl Acc Id: ENSMUST00000127183
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4138,527,881 - 138,539,522 (-)Ensembl
GRCm38.p6 Ensembl4138,800,570 - 138,812,211 (-)Ensembl
Ensembl Acc Id: ENSMUST00000136393
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4138,531,876 - 138,546,568 (-)Ensembl
GRCm38.p6 Ensembl4138,804,565 - 138,819,257 (-)Ensembl
Ensembl Acc Id: ENSMUST00000140100
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4138,586,376 - 138,590,760 (-)Ensembl
GRCm38.p6 Ensembl4138,859,065 - 138,863,449 (-)Ensembl
Ensembl Acc Id: ENSMUST00000140117
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4138,531,890 - 138,546,539 (-)Ensembl
GRCm38.p6 Ensembl4138,804,579 - 138,819,228 (-)Ensembl
Ensembl Acc Id: ENSMUST00000154844
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4138,533,496 - 138,537,134 (-)Ensembl
GRCm38.p6 Ensembl4138,806,185 - 138,809,823 (-)Ensembl
RefSeq Acc Id: NM_001122954   ⟹   NP_001116426
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394138,526,558 - 138,590,784 (-)NCBI
GRCm384138,799,247 - 138,863,469 (-)ENTREZGENE
MGSCv374138,355,162 - 138,419,384 (-)RGD
Celera4140,584,350 - 140,649,745 (-)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001424807   ⟹   NP_001411736
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394138,526,558 - 138,563,790 (-)NCBI
RefSeq Acc Id: NM_001424808   ⟹   NP_001411737
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394138,526,558 - 138,533,589 (-)NCBI
RefSeq Acc Id: NM_011110   ⟹   NP_035240
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394138,526,558 - 138,546,539 (-)NCBI
GRCm384138,799,247 - 138,819,257 (-)NCBI
MGSCv374138,355,162 - 138,419,384 (-)RGD
Celera4140,584,350 - 140,649,745 (-)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_188945
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394138,526,558 - 138,590,784 (-)NCBI
RefSeq Acc Id: XM_006538658   ⟹   XP_006538721
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394138,526,558 - 138,537,130 (-)NCBI
GRCm384138,799,254 - 138,809,819 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017320044   ⟹   XP_017175533
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394138,526,565 - 138,549,683 (-)NCBI
GRCm384138,799,254 - 138,822,372 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036163835   ⟹   XP_036019728
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394138,526,558 - 138,546,606 (-)NCBI
Sequence:
RefSeq Acc Id: NP_035240   ⟸   NM_011110
- Peptide Label: precursor
- UniProtKB: Q9QZU6 (UniProtKB/Swiss-Prot),   P97391 (UniProtKB/Swiss-Prot),   Q6GTW1 (UniProtKB/TrEMBL),   E9PZD1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001116426   ⟸   NM_001122954
- Peptide Label: precursor
- UniProtKB: Q9QZU6 (UniProtKB/Swiss-Prot),   P97391 (UniProtKB/Swiss-Prot),   Q6GTW1 (UniProtKB/TrEMBL),   E9PZD1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006538721   ⟸   XM_006538658
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_017175533   ⟸   XM_017320044
- Peptide Label: isoform X1
- UniProtKB: Q9QZU6 (UniProtKB/Swiss-Prot),   P97391 (UniProtKB/Swiss-Prot),   Q6GTW1 (UniProtKB/TrEMBL),   E9PZD1 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000030524   ⟸   ENSMUST00000030524
Ensembl Acc Id: ENSMUSP00000099571   ⟸   ENSMUST00000102513
Ensembl Acc Id: ENSMUSP00000099570   ⟸   ENSMUST00000102512
Ensembl Acc Id: ENSMUSP00000099569   ⟸   ENSMUST00000102511
RefSeq Acc Id: XP_036019728   ⟸   XM_036163835
- Peptide Label: isoform X1
RefSeq Acc Id: NP_001411736   ⟸   NM_001424807
- Peptide Label: precursor
- UniProtKB: Q9QZU6 (UniProtKB/Swiss-Prot),   P97391 (UniProtKB/Swiss-Prot),   E9PZD1 (UniProtKB/TrEMBL),   Q6GTW1 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001411737   ⟸   NM_001424808
- Peptide Label: precursor
- UniProtKB: Q9QZU6 (UniProtKB/Swiss-Prot),   P97391 (UniProtKB/Swiss-Prot),   E9PZD1 (UniProtKB/TrEMBL),   Q6GTW1 (UniProtKB/TrEMBL)
Protein Domains
Phospholipase A2

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P97391-F1-model_v2 AlphaFold P97391 1-137 view protein structure

Promoters
RGD ID:6885202
Promoter ID:EPDNEW_M6052
Type:multiple initiation site
Name:Pla2g5_1
Description:Mus musculus phospholipase A2, group V , transcript variant 1,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M6054  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm384138,819,228 - 138,819,288EPDNEW
RGD ID:6885206
Promoter ID:EPDNEW_M6054
Type:multiple initiation site
Name:Pla2g5_2
Description:Mus musculus phospholipase A2, group V , transcript variant 1,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M6052  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm384138,863,460 - 138,863,520EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:101899 AgrOrtholog
Ensembl Genes ENSMUSG00000041193 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000030524 ENTREZGENE
  ENSMUST00000102511 ENTREZGENE
  ENSMUST00000102512 ENTREZGENE
Gene3D-CATH 1.20.90.10 UniProtKB/Swiss-Prot
InterPro PLipase_A2 UniProtKB/Swiss-Prot
  PLipase_A2_Asp_AS UniProtKB/Swiss-Prot
  PLipase_A2_dom UniProtKB/Swiss-Prot
  PLipase_A2_dom_sf UniProtKB/Swiss-Prot
  PLipase_A2_His_AS UniProtKB/Swiss-Prot
KEGG Report mmu:18784 UniProtKB/Swiss-Prot
MGD MGI:101899 ENTREZGENE
NCBI Gene 18784 ENTREZGENE
PANTHER PHOSPHOLIPASE A2 GROUP V UniProtKB/Swiss-Prot
  PTHR11716 UniProtKB/Swiss-Prot
Pfam Phospholip_A2_1 UniProtKB/Swiss-Prot
PhenoGen Pla2g5 PhenoGen
PRINTS PHPHLIPASEA2 UniProtKB/Swiss-Prot
PROSITE PA2_ASP UniProtKB/Swiss-Prot
  PA2_HIS UniProtKB/Swiss-Prot
SMART PA2c UniProtKB/Swiss-Prot
Superfamily-SCOP SSF48619 UniProtKB/Swiss-Prot
UniProt E9PZD1 ENTREZGENE
  P97391 ENTREZGENE, UniProtKB/Swiss-Prot
  Q6GTW1 ENTREZGENE, UniProtKB/TrEMBL
  Q8BJ93_MOUSE UniProtKB/TrEMBL
  Q9QZU6 ENTREZGENE
UniProt Secondary Q9QZU6 UniProtKB/Swiss-Prot