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Imported Disease Annotations - ClinVarTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | genetic disease | | ISO | RGD:735909 | 8554872 | ClinVar Annotator: match by term: Inborn genetic diseases | ClinVar | | |
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Imported Disease Annotations - ClinVarTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | genetic disease | | ISO | RGD:735909 | 8554872 | ClinVar Annotator: match by term: Inborn genetic diseases | ClinVar | | |
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# | Reference Title | Reference Citation |
1. | Protection against diet-induced obesity and obesity- related insulin resistance in Group 1B PLA2-deficient mice. | Huggins KW, etal., Am J Physiol Endocrinol Metab 2002 Nov;283(5):E994-E1001. |
2. | Functional annotation of a full-length mouse cDNA collection. | Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90. |
3. | Electronic Transfer of Homolog Data | MGD and Homologene mouse data transfer |
4. | MGDs mouse GO annotations | MGD data from the GO Consortium |
5. | MGD IEA | MGD IEA |
6. | Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. | Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73. |
7. | KEGG Annotation Import Pipeline | Pipeline to import KEGG annotations from KEGG into RGD |
8. | Mouse MP Annotation Import Pipeline | RGD automated import pipeline |
9. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
10. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
11. | On the diversity of secreted phospholipases A(2). Cloning, tissue distribution, and functional expression of two novel mouse group II enzymes. | Valentin E, etal., J Biol Chem 1999 Oct 29;274(44):31195-202. |
PMID:7925459 | PMID:8043009 | PMID:8063822 | PMID:8175726 | PMID:8550569 | PMID:9247121 | PMID:9407054 | PMID:10066760 | PMID:10349636 | PMID:10531350 | PMID:10534105 | PMID:10689188 |
PMID:10922068 | PMID:11042159 | PMID:11076861 | PMID:11266383 | PMID:11313018 | PMID:11694541 | PMID:12050136 | PMID:12477932 | PMID:12727230 | PMID:14610273 | PMID:14651853 | PMID:14681479 |
PMID:15220345 | PMID:16141072 | PMID:16141073 | PMID:16567514 | PMID:16602821 | PMID:17223797 | PMID:18799693 | PMID:20215528 | PMID:21746963 | PMID:21873635 | PMID:21908646 | PMID:22680611 |
PMID:23266724 | PMID:24747111 | PMID:36603702 |
Pla2g1b (Mus musculus - house mouse) |
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PLA2G1B (Homo sapiens - human) |
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Pla2g1b (Rattus norvegicus - Norway rat) |
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Pla2g1b (Chinchilla lanigera - long-tailed chinchilla) |
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PLA2G1B (Pan paniscus - bonobo/pygmy chimpanzee) |
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PLA2G1B (Canis lupus familiaris - dog) |
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Pla2g1b (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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PLA2G1B (Sus scrofa - pig) |
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PLA2G1B (Chlorocebus sabaeus - green monkey) |
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Pla2g1b (Heterocephalus glaber - naked mole-rat) |
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Variants in Pla2g1b
258 total Variants ![]() |
The detailed report is available here: | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer |
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
Pla2g1b |
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RefSeq Transcripts | NM_001356586 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
NM_001356587 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_011107 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NR_151517 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AC117735 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
AF094610 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AF094611 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AF097637 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AF162712 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AF187852 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK007730 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK007797 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK008331 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK008664 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK008668 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK008841 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK008934 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK008936 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK009314 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK019009 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK028104 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK028134 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC145546 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC145908 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC145910 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BY088109 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH466529 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | ENSMUST00000031495 ⟹ ENSMUSP00000031495 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000112071 ⟹ ENSMUSP00000107702 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000125568 ⟹ ENSMUSP00000120743 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000145785 ⟹ ENSMUSP00000138683 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000202822 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | NM_001356586 ⟹ NP_001343515 | ||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NM_001356587 ⟹ NP_001343516 | ||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NM_011107 ⟹ NP_035237 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NR_151517 | ||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||
Type: | NON-CODING | ||||||||||||
Position: |
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Sequence: |
Protein RefSeqs | NP_001343515 | (Get FASTA) | NCBI Sequence Viewer |
NP_001343516 | (Get FASTA) | NCBI Sequence Viewer | |
NP_035237 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAD19896 | (Get FASTA) | NCBI Sequence Viewer |
AAD45806 | (Get FASTA) | NCBI Sequence Viewer | |
AAF02298 | (Get FASTA) | NCBI Sequence Viewer | |
AAF44297 | (Get FASTA) | NCBI Sequence Viewer | |
AAG27064 | (Get FASTA) | NCBI Sequence Viewer | |
AAI45909 | (Get FASTA) | NCBI Sequence Viewer | |
AAI45911 | (Get FASTA) | NCBI Sequence Viewer | |
BAB25218 | (Get FASTA) | NCBI Sequence Viewer | |
BAB25263 | (Get FASTA) | NCBI Sequence Viewer | |
BAB25608 | (Get FASTA) | NCBI Sequence Viewer | |
BAB25819 | (Get FASTA) | NCBI Sequence Viewer | |
BAB25822 | (Get FASTA) | NCBI Sequence Viewer | |
BAB25922 | (Get FASTA) | NCBI Sequence Viewer | |
BAB25976 | (Get FASTA) | NCBI Sequence Viewer | |
BAB25978 | (Get FASTA) | NCBI Sequence Viewer | |
BAB26212 | (Get FASTA) | NCBI Sequence Viewer | |
BAC25749 | (Get FASTA) | NCBI Sequence Viewer | |
BAC25763 | (Get FASTA) | NCBI Sequence Viewer | |
EDL19858 | (Get FASTA) | NCBI Sequence Viewer | |
Q9Z0Y2 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_035237 ⟸ NM_011107 |
- Peptide Label: | isoform 1 precursor |
- UniProtKB: | Q9D7E2 (UniProtKB/Swiss-Prot), A6H6K5 (UniProtKB/Swiss-Prot), Q9D884 (UniProtKB/Swiss-Prot), Q9Z0Y2 (UniProtKB/Swiss-Prot), D3YWH2 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | NP_001343515 ⟸ NM_001356586 |
- Peptide Label: | isoform 2 precursor |
- UniProtKB: | D3YWH2 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | NP_001343516 ⟸ NM_001356587 |
- Peptide Label: | isoform 3 precursor |
- UniProtKB: | D3Z1N8 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | ENSMUSP00000120743 ⟸ ENSMUST00000125568 |
RefSeq Acc Id: | ENSMUSP00000031495 ⟸ ENSMUST00000031495 |
RefSeq Acc Id: | ENSMUSP00000107702 ⟸ ENSMUST00000112071 |
RefSeq Acc Id: | ENSMUSP00000138683 ⟸ ENSMUST00000145785 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-Q9Z0Y2-F1-model_v2 | AlphaFold | Q9Z0Y2 | 1-146 | view protein structure |
Database | Acc Id | Source(s) |
AGR Gene | MGI:101842 | AgrOrtholog |
Ensembl Genes | ENSMUSG00000029522 | Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Ensembl Protein | ENSMUSP00000031495 | ENTREZGENE, UniProtKB/Swiss-Prot |
ENSMUSP00000107702 | ENTREZGENE | |
ENSMUSP00000107702.2 | UniProtKB/TrEMBL | |
ENSMUSP00000120743 | ENTREZGENE | |
ENSMUSP00000120743.2 | UniProtKB/TrEMBL | |
ENSMUSP00000138683.2 | UniProtKB/TrEMBL | |
Ensembl Transcript | ENSMUST00000031495 | ENTREZGENE, UniProtKB/Swiss-Prot |
ENSMUST00000112071 | ENTREZGENE | |
ENSMUST00000112071.8 | UniProtKB/TrEMBL | |
ENSMUST00000125568 | ENTREZGENE | |
ENSMUST00000125568.2 | UniProtKB/TrEMBL | |
ENSMUST00000145785.8 | UniProtKB/TrEMBL | |
Gene3D-CATH | 1.20.90.10 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
InterPro | PLipase_A2 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PLipase_A2_Asp_AS | UniProtKB/Swiss-Prot | |
PLipase_A2_dom | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
PLipase_A2_dom_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
PLipase_A2_His_AS | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
KEGG Report | mmu:18778 | UniProtKB/Swiss-Prot |
MGD | MGI:101842 | ENTREZGENE |
NCBI Gene | 18778 | ENTREZGENE |
PANTHER | PHOSPHOLIPASE A2 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PTHR11716 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Pfam | Phospholip_A2_1 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PhenoGen | Pla2g1b | PhenoGen |
PRINTS | PHPHLIPASEA2 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PROSITE | PA2_ASP | UniProtKB/Swiss-Prot |
PA2_HIS | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
SMART | PA2c | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Superfamily-SCOP | SSF48619 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
UniProt | A6H6K5 | ENTREZGENE |
D3YWH2 | ENTREZGENE, UniProtKB/TrEMBL | |
D3Z1N8 | ENTREZGENE, UniProtKB/TrEMBL | |
PA21B_MOUSE | UniProtKB/Swiss-Prot | |
Q9D7E2 | ENTREZGENE | |
Q9D884 | ENTREZGENE | |
Q9Z0Y2 | ENTREZGENE | |
S4R2K6_MOUSE | UniProtKB/TrEMBL | |
UniProt Secondary | A6H6K5 | UniProtKB/Swiss-Prot |
Q9D7E2 | UniProtKB/Swiss-Prot | |
Q9D884 | UniProtKB/Swiss-Prot |