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Gene: Foxd4 (forkhead box D4) Rattus norvegicus
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Symbol: Foxd4
Name: forkhead box D4
RGD ID: 621716
Description: Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in anatomical structure morphogenesis; cell differentiation; and regulation of transcription by RNA polymerase II. Predicted to localize to nuclear chromatin. Orthologous to human FOXD4 (forkhead box D4); INTERACTS WITH 6-propyl-2-thiouracil; ammonium chloride; indole-3-methanol.
Type: protein-coding
RefSeq Status: MODEL
Also known as: forkhead box protein D4; forkhead-related protein FKHL9; forkhead-related transcription factor 5; FREAC-5; hepatocyte nuclear factor 3 forkhead homolog 6; HFH-6; LOW QUALITY PROTEIN: forkhead box protein D4
Orthologs:
Homo sapiens (human) : FOXD4 (forkhead box D4)  HGNC  Alliance
Mus musculus (house mouse) : Foxd4 (forkhead box D4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Foxd4 (forkhead box D4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Foxd4 (forkhead box D4)
Sus scrofa (pig) : FOXD4 (forkhead box D4)
Heterocephalus glaber (naked mole-rat) : Foxd4 (forkhead box D4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01242,808,886 - 242,810,186 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1242,808,965 - 242,810,186 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01250,082,104 - 250,083,404 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41228,348,202 - 228,349,654 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11228,512,922 - 228,513,225 (-)NCBI
Celera1219,761,312 - 219,762,612 (-)NCBICelera
Cytogenetic Map1q51NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Foxd4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 621716
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.