Advanced Search (OLGA)

Gene: Ppp1r3b (protein phosphatase 1, regulatory subunit 3B) Rattus norvegicus

Analyze

Symbol:

Ppp1r3b

Name:

protein phosphatase 1, regulatory subunit 3B

RGD ID:

621600

Description:

Enables [phosphorylase] phosphatase activity; enzyme binding activity; and protein phosphatase regulator activity. Contributes to phosphoprotein phosphatase activity. Involved in regulation of glycogen biosynthetic process and regulation of glycogen catabolic process. Located in glycogen granule. Part of protein phosphatase type 1 complex. Orthologous to human PPP1R3B (protein phosphatase 1 regulatory subunit 3B); PARTICIPATES IN glycogen biosynthetic pathway; glycogen degradation pathway; insulin signaling pathway; INTERACTS WITH (+)-schisandrin B; 1-naphthyl isothiocyanate; 17beta-estradiol.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

33 kDa glycogen-binding protein; hepatic glycogen-targeting protein phosphatase 1 regulatory subunit GL; Loc192280; PP1 subunit R4; protein phosphatase 1 (GL-subunit); protein phosphatase 1 regulatory subunit 3B; protein phosphatase 1 regulatory subunit 4; protein phosphatase 1 subunit GL; protein phosphatase 1, regulatory (inhibitor) subunit 3B; R4

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PPP1R3B (protein phosphatase 1 regulatory subunit 3B)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Ppp1r3b (protein phosphatase 1, regulatory subunit 3B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ppp1r3b (protein phosphatase 1 regulatory subunit 3B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PPP1R3B (protein phosphatase 1 regulatory subunit 3B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	PPP1R3B (protein phosphatase 1 regulatory subunit 3B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ppp1r3b (protein phosphatase 1 regulatory subunit 3B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	PPP1R3B (protein phosphatase 1 regulatory subunit 3B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	PPP1R3B (protein phosphatase 1 regulatory subunit 3B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ppp1r3b (protein phosphatase 1 regulatory subunit 3B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	ACTR2 (actin related protein 2)	HGNC	OMA
Alliance orthologs ³
Mus musculus (house mouse):	Ppp1r3b (protein phosphatase 1, regulatory subunit 3B)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	PPP1R3B (protein phosphatase 1 regulatory subunit 3B)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	ppp1r3b (protein phosphatase 1, regulatory subunit 3B)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	GAC1	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER)
Caenorhabditis elegans (roundworm):	H18N23.2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Gbs-70E	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	PIG2	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER\|PhylomeDB)
Saccharomyces cerevisiae (baker's yeast):	PIG1	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	ppp1r3b	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	63,533,318 - 63,545,683 (-)	NCBI		GRCr8
mRatBN7.2	16	56,830,011 - 56,842,395 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	56,829,660 - 56,842,406 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	16	62,142,204 - 62,154,551 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	65,556,188 - 65,568,535 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	60,776,161 - 60,788,508 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	60,415,192 - 60,427,498 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	60,415,229 - 60,427,474 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	60,089,230 - 60,101,526 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	60,552,431 - 60,564,789 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	16	60,552,514 - 60,564,864 (-)	NCBI
Celera	16	54,879,618 - 54,891,875 (-)	NCBI		Celera
Cytogenetic Map	16	q12.2	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Experimental Liver Cirrhosis (ISO)

Neurodevelopmental Disorders (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

(1->4)-beta-D-glucan (ISO)

1-naphthyl isothiocyanate (EXP)

17beta-estradiol (EXP,ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dibromophenyl 2,4,5-tribromophenyl ether (ISO)

2,4-dinitrotoluene (EXP)

2-hydroxypropanoic acid (ISO)

3,3',4,4',5-pentachlorobiphenyl (EXP)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-diaminodiphenylmethane (EXP)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

acrylamide (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

ammonium chloride (EXP)

antirheumatic drug (ISO)

aristolochic acid A (ISO)

arsenite(3-) (ISO)

belinostat (ISO)

benzo[a]pyrene (ISO)

benzo[b]fluoranthene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

cadmium atom (ISO)

cadmium dichloride (EXP,ISO)

calcitriol (ISO)

carbon nanotube (ISO)

ciguatoxin CTX1B (ISO)

cisplatin (ISO)

copper atom (ISO)

copper(0) (ISO)

crocidolite asbestos (ISO)

CU-O LINKAGE (ISO)

cyclosporin A (ISO)

dexamethasone (ISO)

dichloroacetic acid (ISO)

diethyl maleate (EXP)

dioxygen (ISO)

dorsomorphin (ISO)

endosulfan (EXP)

entinostat (ISO)

epoxiconazole (ISO)

fenvalerate (EXP)

fluoranthene (ISO)

furan (EXP)

gentamycin (EXP)

hydrogen cyanide (ISO)

indometacin (ISO)

inulin (ISO)

kenpaullone (EXP)

methylmercury chloride (ISO)

N-nitrosodiethylamine (EXP)

N-nitrosodimethylamine (EXP)

N-Nitrosopyrrolidine (ISO)

nefazodone (EXP)

nickel dichloride (ISO)

niclosamide (ISO)

nimesulide (EXP)

O-methyleugenol (ISO)

oxaliplatin (EXP)

panobinostat (ISO)

paracetamol (ISO)

perfluorooctane-1-sulfonic acid (EXP,ISO)

perfluorooctanoic acid (EXP)

permethrin (ISO)

phenformin (EXP)

phenobarbital (ISO)

pirinixic acid (EXP,ISO)

potassium cyanide (ISO)

rac-lactic acid (ISO)

resveratrol (ISO)

rotenone (EXP,ISO)

SB 431542 (ISO)

senecionine (ISO)

sevoflurane (EXP)

silicon dioxide (ISO)

sodium arsenite (ISO)

sodium dichromate (EXP)

testosterone (ISO)

tetrachloromethane (EXP,ISO)

thimerosal (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

topotecan (EXP)

trichloroethene (EXP)

trichostatin A (ISO)

triphenyl phosphate (EXP,ISO)

triptonide (ISO)

valdecoxib (EXP)

valproic acid (ISO)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

glycogen metabolic process (IEA)

negative regulation of glycogen catabolic process (IEA,ISO)

positive regulation of glycogen biosynthetic process (IEA,ISO)

regulation of glycogen biosynthetic process (IBA,IDA)

regulation of glycogen catabolic process (IDA,IEA)

Cellular Component

glycogen granule (IDA)

protein phosphatase type 1 complex (IBA,IDA,IEA)

Molecular Function

[phosphorylase] phosphatase activity (IMP)

enzyme binding (IDA,IMP,IPI)

glycogen binding (IBA)

phosphoprotein phosphatase activity (IDA)

protein binding (ISO)

protein phosphatase 1 binding (IBA)

protein phosphatase regulator activity (IDA,IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

glycogen biosynthetic pathway (IDA,ISO)

glycogen degradation pathway (IDA,ISO)

insulin signaling pathway (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	The level of the glycogen targetting regulatory subunit R5 of protein phosphatase 1 is decreased in the livers of insulin-dependent diabetic rats and starved rats.	Browne GJ, etal., Biochem J. 2001 Dec 1;360(Pt 2):449-59.
2.	Functional diversity of protein phosphatase-1, a cellular economizer and reset button.	Ceulemans H and Bollen M, Physiol Rev. 2004 Jan;84(1):1-39.
3.	Amino acid sequence and expression of the hepatic glycogen-binding (GL)-subunit of protein phosphatase-1.	Doherty MJ, etal., FEBS Lett 1995 Nov 20;375(3):294-8.
4.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
5.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
6.	Purification of the hepatic glycogen-associated form of protein phosphatase-1 by microcystin-Sepharose affinity chromatography.	Moorhead G, etal., FEBS Lett. 1995 Apr 3;362(2):101-5.
7.	A novel glycogen-targeting subunit of protein phosphatase 1 that is regulated by insulin and shows differential tissue distribution in humans and rodents.	Munro S, etal., FEBS J. 2005 Mar;272(6):1478-89.
8.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
9.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
10.	GOA pipeline	RGD automated data pipeline
11.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
12.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
13.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Additional References at PubMed

PMID:18298402	PMID:22225877

Genomics

Comparative Map Data

Ppp1r3b
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	63,533,318 - 63,545,683 (-)	NCBI		GRCr8
mRatBN7.2	16	56,830,011 - 56,842,395 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	56,829,660 - 56,842,406 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	16	62,142,204 - 62,154,551 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	65,556,188 - 65,568,535 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	60,776,161 - 60,788,508 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	60,415,192 - 60,427,498 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	60,415,229 - 60,427,474 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	60,089,230 - 60,101,526 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	60,552,431 - 60,564,789 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	16	60,552,514 - 60,564,864 (-)	NCBI
Celera	16	54,879,618 - 54,891,875 (-)	NCBI		Celera
Cytogenetic Map	16	q12.2	NCBI

PPP1R3B
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	9,136,255 - 9,151,539 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	8	9,136,255 - 9,151,574 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	8	8,993,765 - 9,009,049 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	9,031,175 - 9,045,630 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	8	9,032,915 - 9,045,616	NCBI
Celera	8	8,122,001 - 8,136,452 (-)	NCBI		Celera
Cytogenetic Map	8	p23.1	NCBI
HuRef	8	7,918,908 - 7,934,297 (-)	NCBI		HuRef
CHM1_1	8	9,059,097 - 9,074,486 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	8	10,592,540 - 10,607,824 (+)	NCBI		T2T-CHM13v2.0

Ppp1r3b
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	35,842,847 - 35,855,293 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	35,842,893 - 35,855,293 (+)	Ensembl		GRCm39 Ensembl
GRCm38	8	35,375,694 - 35,388,139 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	35,375,739 - 35,388,139 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	36,438,795 - 36,451,193 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	36,844,258 - 36,856,656 (+)	NCBI		MGSCv36	mm8
Celera	8	38,013,471 - 38,026,084 (+)	NCBI		Celera
Cytogenetic Map	8	A4	NCBI
cM Map	8	21.16	NCBI

Ppp1r3b
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955463	5,208,149 - 5,220,970 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955463	5,208,127 - 5,220,970 (-)	NCBI	ChiLan1.0	ChiLan1.0

PPP1R3B
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	7	25,593,317 - 25,617,443 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	8	1,621,216 - 1,636,686 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	8	10,059,531 - 10,074,820 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3

PPP1R3B
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	16	35,372,928 - 35,384,640 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	16	35,372,859 - 35,381,921 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	16	35,837,710 - 35,849,122 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	16	37,404,755 - 37,416,979 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	16	37,406,741 - 37,416,415 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	16	35,510,292 - 35,522,176 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	16	36,073,646 - 36,085,794 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	16	36,192,990 - 36,204,446 (+)	NCBI		UU_Cfam_GSD_1.0

Ppp1r3b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404943	43,778,857 - 43,791,311 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936573	1,351,219 - 1,363,598 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936573	1,351,207 - 1,363,639 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PPP1R3B
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	56,002,378 - 56,013,478 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	15	56,002,383 - 56,013,477 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	63,426,353 - 63,437,318 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PPP1R3B
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	9,912,834 - 9,924,510 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	8	9,922,735 - 9,923,592 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666052	32,467,916 - 32,482,055 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ppp1r3b
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624839	5,228,674 - 5,240,816 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624839	5,228,674 - 5,240,808 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Ppp1r3b
93 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	479
Count of miRNA genes:	252
Interacting mature miRNAs:	327
Transcripts:	ENSRNOT00000051720
Prediction methods:	Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2300163	Bmd64	Bone mineral density QTL 64	5.3	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	16	37752156	82752156	Rat
1600378	Arunc4	Aerobic running capacity QTL 4		0.03	exercise endurance trait (VT:0002332)	maximum distance run on treadmill (CMO:0001406)	16	380245	80345693	Rat
70215	Niddm29	Non-insulin dependent diabetes mellitus QTL 29	3.54		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	16	19004435	75226532	Rat
1578768	Stresp22	Stress response QTL 22	2.8		thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	16	35288870	80288870	Rat
737826	Alc11	Alcohol consumption QTL 11	3.2		consumption behavior trait (VT:0002069)	ethanol drink intake rate (CMO:0001407)	16	4227609	60252231	Rat
2302057	Pia29	Pristane induced arthritis QTL 29	3.6	0.001	blood autoantibody amount (VT:0003725)	serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)	16	21735975	66735975	Rat
7205510	Activ5	Activity QTL 5	3.78	0.00028	locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	16	42396345	84729064	Rat
631525	Pia14	Pristane induced arthritis QTL 14	4.4		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	16	55711087	83402471	Rat
8694453	Bw172	Body weight QTL 172	8.33	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	16	24325513	69325513	Rat
7411648	Foco22	Food consumption QTL 22	15	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	16	52726464	84729064	Rat
1298529	Arunc1	Aerobic running capacity QTL 1	4		exercise endurance trait (VT:0002332)	maximum distance run on treadmill (CMO:0001406)	16	31951520	60148445	Rat
2312663	Slep9	Serum leptin concentration QTL 9		0.001	blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	16	832236	59492508	Rat
2312660	Bw95	Body weight QTL 95		0.05	inguinal fat pad mass (VT:0010424)	inguinal fat pad weight to body weight ratio (CMO:0001253)	16	832236	59492508	Rat
6903294	Stl30	Serum triglyceride level QTL 30	2.6	0.0013	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	16	25152793	70152793	Rat
2293690	Bss45	Bone structure and strength QTL 45	5.13	0.0001	lumbar vertebra morphology trait (VT:0010494)	lumbar vertebra cortical cross-sectional area (CMO:0001690)	16	37752156	82752156	Rat
8694364	Abfw7	Abdominal fat weight QTL 7	12.22	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	16	52726464	84729064	Rat
2312666	Insul16	Insulin level QTL 16		0.01	blood insulin amount (VT:0001560)	serum insulin level (CMO:0000358)	16	832236	59492508	Rat
8694429	Bw164	Body weight QTL 164	5	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	16	52726464	84729064	Rat
70205	Gcr3	Gastric cancer resistance QTL 3	2.3		stomach morphology trait (VT:0000470)	stomach tumor diameter (CMO:0001889)	16	17696791	82635055	Rat
2312669	Stl23	Serum triglyceride level QTL 23		0.01	blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	16	832236	59492508	Rat

Markers in Region

AU048745

Rat Assembly	Chr	Position (strand)	Source
Cytogenetic Map	5	q32	UniSTS
Cytogenetic Map	13	q24	UniSTS
Cytogenetic Map	6	q32	UniSTS
Cytogenetic Map	17	p12	UniSTS
Cytogenetic Map	16	p14	UniSTS
Cytogenetic Map	13	q26	UniSTS
Cytogenetic Map	10	q22	UniSTS
Cytogenetic Map	7	q11	UniSTS
Cytogenetic Map	8	q24	UniSTS
Cytogenetic Map	5	q21	UniSTS
Cytogenetic Map	4	q24	UniSTS
Cytogenetic Map	2	q11	UniSTS
Cytogenetic Map	1	q54	UniSTS
Cytogenetic Map	1	q36	UniSTS
Cytogenetic Map	18	p11	UniSTS
Cytogenetic Map	13	q13	UniSTS
Cytogenetic Map	10	q24	UniSTS
Cytogenetic Map	8	q31	UniSTS
Cytogenetic Map	3	q21	UniSTS
Cytogenetic Map	13	p13	UniSTS
Cytogenetic Map	1	q21	UniSTS
Cytogenetic Map	11	q23	UniSTS
Cytogenetic Map	10	q31	UniSTS
Cytogenetic Map	16	q12.2	UniSTS
Cytogenetic Map	3	q24	UniSTS
Cytogenetic Map	5	q36	UniSTS
Cytogenetic Map	3	p13	UniSTS

RH143497

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	56,832,004 - 56,832,120 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	60,417,186 - 60,417,301	NCBI	Rnor6.0
Rnor_5.0	16	60,091,224 - 60,091,339	UniSTS	Rnor5.0
RGSC_v3.4	16	60,554,399 - 60,554,514	UniSTS	RGSC3.4
Celera	16	54,881,586 - 54,881,701	UniSTS
RH 3.4 Map	16	542.51	UniSTS
Cytogenetic Map	16	q12.2	UniSTS

BE113230

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	56,840,640 - 56,840,822 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	60,425,720 - 60,425,901	NCBI	Rnor6.0
Rnor_5.0	16	60,099,758 - 60,099,939	UniSTS	Rnor5.0
RGSC_v3.4	16	60,563,035 - 60,563,216	UniSTS	RGSC3.4
Celera	16	54,890,121 - 54,890,302	UniSTS
RH 3.4 Map	16	559.2	UniSTS
Cytogenetic Map	16	q12.2	UniSTS

PMC154451P1

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	56,833,838 - 56,834,072 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	60,419,020 - 60,419,253	NCBI	Rnor6.0
Rnor_5.0	16	60,093,058 - 60,093,291	UniSTS	Rnor5.0
RGSC_v3.4	16	60,556,233 - 60,556,466	UniSTS	RGSC3.4
Celera	16	54,883,420 - 54,883,653	UniSTS
Cytogenetic Map	16	q12.2	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001434432	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434433	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_138912	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253215	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253216	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010058276	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC072514	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473970	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	Y18208	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000051720 ⟹ ENSRNOP00000042713

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	16	56,829,660 - 56,842,406 (-)	Ensembl
Rnor_6.0 Ensembl	16	60,415,229 - 60,427,474 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000082091 ⟹ ENSRNOP00000070738

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	16	60,418,423 - 60,426,561 (-)	Ensembl

RefSeq Acc Id:

NM_138912 ⟹ NP_620267

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	63,533,318 - 63,545,675 (-)	NCBI
mRatBN7.2	16	56,830,037 - 56,842,395 (-)	NCBI
Rnor_6.0	16	60,415,218 - 60,427,474 (-)	NCBI
Rnor_5.0	16	60,089,230 - 60,101,526 (-)	NCBI
RGSC_v3.4	16	60,552,431 - 60,564,789 (-)	RGD
Celera	16	54,879,618 - 54,891,875 (-)	RGD

Sequence:

show sequence

CTGGAAAGTTAAAGGGCGCCACGGGCTGCTGGAGCCAGAATCCAGAGTGCTGAAAGCCAGAGAG
CAGGTGAGAGGGCTGCTGTTGCAAGGACCAAGCCGAGTGCCTGCCCCGCTTTTGCCGTCGTGGT
TGCTGTCACTGTCATCCAGCTCAGATGGTGGGGCGGGCTGAAGGGTCTCCCCTCCATAGTCAAG
AGCTGTACCGGACTTCTAGCCTGCCCCTCTAACGTGATGGCCGTGGACATAGAATACAGCTACA
GCAGTATGGCCCCTTCTCTGCGCAGAGAGCGCTTCACCTTCAAGATCTCCCCCAAACTGAACAA
GCCACTGAGGCCTTGTATTCAGCTGGGCAGCAAGGATGAAGCCGGCAGAATGGTGGCCCCCACA
GTGCAGGAGAAGAAGGTGAAGAAGCGGGTGTCCTTCGCCGACAACCAGGGGCTGGCCCTAACAA
TGGTGAAAGTGTTCTCGGAATTCGATGACCCACTAGATATTCCGTTTAACATCACTGAGCTCCT
AGACAACATCGTGAGTCTGACGACAGCAGAGAGTGAGAGCTTTGTTTTGGATTTTCCGCAGCCT
TCTGCAGATTACTTAGACTTTAGAAATCGGCTTCAGACCAACCATGTCTGCCTCGAAAACTGCG
TGCTGAAGGAGAAAGCCATCGCGGGCACCGTCAAGGTCCAGAACCTGGCATTCGAGAAGGTTGT
GAAGATCAGGATGACATTCGATACCTGGAAAAGCTTCACAGACTTCCCTTGTCAGTATGTGAAG
GACACTTACGCTGGTTCAGACAGGGACACATTCTCCTTTGATATCAGCCTACCGGAGAAAATCC
AGTCTTATGAAAGAATGGAGTTCGCCGTGTGCTACGAGTGTAACGGCCAGTCGTACTGGGACAG
CAACAAAGGCAAAAACTACAGGATCACCAGGGCCGAACTCAGATCCACCCAGGGAATGACTGAG
CCGTACAATGGGCCGGATTTTGGAATCTCTTTTGACCAGTTCGGGAGCCCTCGGTGTTCCTTCG
GCCTGTTTCCAGAGTGGCCTAGTTATCTGGGGTATGAAAAGCTGGGGCCCTATTACTAGTGAGT
TGACTGCAGTTGACAGTCTGTGTCTCTGATCAAGGTGGAGGTGAGAACGCGAGGCCAGAGGGAA
GTTGATCTGCCATTAGGCGTGGTTTTTGAAAAGACAGGATCCTGTTCACCTTTTTCTCAAACCG
GCAAGTCCAGTGTGCTTCCATCACGCCTGGTTTCTTGCTCAGAGGAGAGGAGGCGTGCTGAACC
TCTGTGGTATCCGGGTTGGCCACAAGGGAATGCACAGGATGGTGCCAGAAGGGTCTGGAGAGGA
GCCAAGCTGGCAAGGACAGAAAGCTGGCCTCCCTTCCACACTTGGTCTTCGAAAGTCACCCAGA
AACCAGGCTCCAGCCTTTTCCAGCCTTACAGTTGACCTCGAGGTCCTGCCCTGCCCATGGCTTT
CCAAGTGTCTCCTTCATTCCACACGGACTCGGAGGGAGTCGTCTCAGTTCTGTGACACACTGGC
CTGATACCCTACAGCCTCAGAAGAGGAATGGGGGACAGCCGTTTTCTGTGCAAGCTCTTTCACT
ACATTTCCTCCCCTTACACAGCCTATCCAGTGATCTGGATGTGATAGTCAAAGCAAATAAGTAG
TTTGTGTCTGGGATAGGCAGTCCCTCCCCTCTCTTCCTGACCCCTCCTCTGTATCCCAACAGAG
AGCAACATATTAGTTACTGGAAAGTCATTGGTTCCCGTGTGGGGTCACATGGCACAGCACCGGG
ACGAGGTGGGACAGTCTGAACTTTTAGCTTTTCCTCTTGGACTTTGGGGGAGCTTTCGAAGCAC
TCAGTTTCACCCCGAGTTTTCAGAAGACTCAGTGACAAGCTGTGTGAGCTGCTTTTGTTTGAGA
GAGTCGTAGCTCTCACGTCTCCTGGAGTGTCCACTTCAGTGCCTTGTCTGAGACTTTCCAATAG
CAAGACTAGCATATCCTGGAATCCTCCAGAGCACGCTTAAATGTGTTTGCAGTATACAGTCATA
TTCAGGATGCTTTACGGACCCCCAAGGACACTGAGTAGGTTTTTTTTTTTTTTATTTATGGTGT
GTATTATAAAAGGATAGGGGAGAAAAACCTTACCAAGTTTTTCTATGTTATTTTAAATGTCAAC
TCTGAGGTATCAGATGAATTTTTCTTAACCATATTGGATTGCAGTTATCATTCGCTAGTGTAAG
ACTCCTGGAACTCTGACTGTTGGGTAAACCTCCAAACCCTGTGATTTTCTTTAGGGCAAATTAA
AATTTTATAGGGGAGTTTGGAAACTTTTTACATGCATATTTGTAGACATTTAGGGGTGTTGTTT
TGTTTTGGAAGTTTGGTAAAAGACGTCTGCTTTTCTTACTAAAGTGATGTTTCCCTGAGACAAG
AGGGAGTCTCACAGATTCAGAGGCGGGGTCGCTGAGCGTAGCCCTTTGCCCTCTGACTTCATAA
GTTAGCAACAGGCAGACATCAAATGTTTTTGATCCTAGCGTGTGTGGTTTATTTTTTATCTTAA
CTTTTTCACTTTTGAAGTGTAAAGCATTTTGACTTTTTTAAAATGTTATTTTCTATGATATCTT
ATTCCTAAAACTGGTACTAGTCTGTAATCTGTGAATTGTATATTGTGCCTCTCTCAGAGGGGTA
GCGATCTGGGGTTGCATGCTGGTATCTGTGAGGAAATCACCTTTGTAAAGTGAAGCTGAAATTG
GGCGATGGGGAGTTTGTGTTTTATCTAAGCATACCTTTATGGGCATACTTTAAATGTTCCGGAT
TTGGTGGTCAGAGCAGCTAGATTTAAATTGGATGGAAGCAAAACTGATCTCTTCTGGGTCATGC
ATTTTGTGGTAAGAAGGAAGGCAGCCAGGGGCACTGTTACTGCAGACTACAGATCATGAAAGGG
CCTGGGGGAACTACAGAATGAAGTCTATCGAGTGGTGTAGAATGATGACCTTCAGACATTCCCT
GTCATAATATGAAATATGGTAATTCCATGTTATGTATCTCTCCTAATACAGACATACCATCACC
CCCTTTTGCCCAGATTTGCCCCAGCTTTCTTGCTTATGGGCGCTAGTTGAACCCCCAGCCAGCA
CACCTGGGGTGCACACCCACTGCTCAGCTCAAAGGGCATGTCTTTGCCTGCTTGTCAGGACCCT
TCCCGATGAAGCAGCCTGTATGCTTGACTTCCTTATCAAGGCTGTCACGTAGAGACTGAAGAGT
CTGTCTTCTGTTTTCTGCCTCCAACACAGCCCTTCTCCTTTTGACCCAGTCTGTCCCATGACTC
TGAGATAGCCGCAGGAGCTGCATTGAGAAACTGTATGCTGCGTTCAGAGTTCACCATTGTAGAC
AAATTTACACACCTCAGAAGATGACAGGCCCTCTTGCTTGAAGATTCCACTGCAGGCTTGACCT
GGAGATCTGCCTTCGTGCAATTCTTGGTTATGGTGCTGGATGGATTCCAATCCCCACACACTGT
GATCCAGGAAGGGAAGGCAACTCCATTCTCAGTTCCACATTTATTTCCCCAAATTCCCTAGGGT
GCCTTTCTTTACAAAATGGGTACAATAAATAAGCTAGACCACAAGACACATTCTCCATGTTTCT
TTCAGGAAGCATTTGGGTATTGTAAGAATTCTTCTTAGGAAACCTAGGAAGACAATGGAAGTCT
ATGGTTCTTCAGAAACTGAAGCAACTTGAGTCAATGGTGGGAGTTATTTTATCCCTGAGATGGT
AGCTTGGTGGCTCCTTGTTCTGGTAAGGTCTGTACTCAATTGTGTCTCCTGGCATAATCACAGA
AACTGCAGATAAGATGTTCTGGAAATCCTGGGATCTTACCTGTAACGGGATCTTCCGGAGTCAC
TCAAAGACGATGTGGCAGCGAGGAGGACAACAGGCAAGAGAGGACTGGTTTCTCTGGCTGAGGG
CTGTGAGGTACCCACAGCTCCATCAGCAAAGCTGTGTGTGTTTCCACGGTGTCGCTGCTAGTTC
CCAGAGACCCCTGGGGCCCAAGGACTTCTAGAATGCACACGTGATGCTGTTACACTTCTGCTTT
AATGTGAACATTCAACTGACCGGGCTTGACGTCACTGTATGCCTAAATGTGCCTTGTCCAGAAA
CTTCTGCATGTTTGTAAGAACTATTTTTGTATACATTGGTAGAGGGGAGATGCACTTTAAAAAA
ATCACAAGAATGGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGAA
GAGAATGGTTTCTTTGTATCTCAAAAGTGAAAATGTAATAAATACAGAAAAAAAAAAAAAAAAA
AAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006253215 ⟹ XP_006253277

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	63,534,034 - 63,545,451 (-)	NCBI
mRatBN7.2	16	56,830,011 - 56,842,169 (-)	NCBI
Rnor_6.0	16	60,415,192 - 60,427,265 (-)	NCBI
Rnor_5.0	16	60,089,230 - 60,101,526 (-)	NCBI

Sequence:

show sequence

ACCTCCCCAAGCCTCTAGCTCAAGGTACAGGGCCAGGAAATCTGCGGGTGAGGGGCACGCTGGA
GAGTTCCCCGCCACTTAACCACTTGTCTCACTTACACTGACTCACAGGGCTCAGGTAGTTTGTC
GCTTCAACGTGCAGAAACATCTCAGGGACTCGAGCTGGGATGGAGCCTAGAGGGGAGCCCCGAA
ATCCCTGCGCCGAGTTAGCCCGCGAAACGTAGCCAGGGGGGACGTCCTGAACAGAAAAGATGTG
GCAAGTCCTGTTATGGCACATCCCCAACCTGAGATTTGACACTTTTGGAGGACAATTCCAGGTT
TTTGCTGCGGAATCTGGAGTCCAAACACAAGCCCCCCAGGGCCTCAGTTTCCCGTTTTACGAAA
TAGATGCAAGAAACCCCGCGTCCCAGCCCTGACTCCATCTAGTAGTGTGGACTTGTTCCTACTA
CTCCCTAGTTTGGTTCAGATCACCCTTTGCTGCACTCAGGCAATAGGATCGAGGTGAGCTCCAC
CCGGGAACGGGGCAGCCCGCGTGGGGGTGCTCGTGAGGCGCTGCTCCCGTCTGGGTTGTCCGGA
CGCCAGGTCCCGCCCTGGTGTGATAACTTGGGCTCCTCCCTCTTGTTCGTCTCCGGGAACTAAG
CCCAGGCCCTACCTCCGGGACACCCCGACGCTCACGTAGTTCAGTGGCAGCAGTCAACCCTGTC
ACTTCTCTTCAGGCTCTCCCATGAGGCCAGCGAGCAGCGACCCCGGCTGCAGCGCCGCGGGAGA
GACTTCTAGCCTGCCCCTCTAACGTGATGGCCGTGGACATAGAATACAGCTACAGCAGTATGGC
CCCTTCTCTGCGCAGAGAGCGCTTCACCTTCAAGATCTCCCCCAAACTGAACAAGCCACTGAGG
CCTTGTATTCAGCTGGGCAGCAAGGATGAAGCCGGCAGAATGGTGGCCCCCACAGTGCAGGAGA
AGAAGGTGAAGAAGCGGGTGTCCTTCGCCGACAACCAGGGGCTGGCCCTAACAATGGTGAAAGT
GTTCTCGGAATTCGATGACCCACTAGATATTCCGTTTAACATCACTGAGCTCCTAGACAACATC
GTGAGTCTGACGACAGCAGAGAGTGAGAGCTTTGTTTTGGATTTTCCGCAGCCTTCTGCAGATT
ACTTAGACTTTAGAAATCGGCTTCAGACCAACCATGTCTGCCTCGAAAACTGCGTGCTGAAGGA
GAAAGCCATCGCGGGCACCGTCAAGGTCCAGAACCTGGCATTCGAGAAGGTTGTGAAGATCAGG
ATGACATTCGATACCTGGAAAAGCTTCACAGACTTCCCTTGTCAGTATGTGAAGGACACTTACG
CTGGTTCAGACAGGGACACATTCTCCTTTGATATCAGCCTACCGGAGAAAATCCAGTCTTATGA
AAGAATGGAGTTCGCCGTGTGCTACGAGTGTAACGGCCAGTCGTACTGGGACAGCAACAAAGGC
AAAAACTACAGGATCACCAGGGCCGAACTCAGATCCACCCAGGGAATGACTGAGCCGTACAATG
GGCCGGATTTTGGAATCTCTTTTGACCAGTTCGGGAGCCCTCGGTGTTCCTTCGGCCTGTTTCC
AGAGTGGCCTAGTTATCTGGGGTATGAAAAGCTGGGGCCCTATTACTAGTGAGTTGACTGCAGT
TGACAGTCTGTGTCTCTGATCAAGGTGGAGGTGAGAACGCGAGGCCAGAGGGAAGTTGATCTGC
CATTAGGCGTGGTTTTTGAAAAGACAGGATCCTGTTCACCTTTTTCTCAAACCGGCAAGTCCAG
TGTGCTTCCATCACGCCTGGTTTCTTGCTCAGAGGAGAGGAGGCGTGCTGAACCTCTGTGGTAT
CCGGGTTGGCCACAAGGGAATGCACAGGATGGTGCCAGAAGGGTCTGGAGAGGAGCCAAGCTGG
CAAGGACAGAAAGCTGGCCTCCCTTCCACACTTGGTCTTCGAAAGTCACCCAGAAACCAGGCTC
CAGCCTTTTCCAGCCTTACAGTTGACCTCGAGGTCCTGCCCTGCCCATGGCTTTCCAAGTGTCT
CCTTCATTCCACACGGACTCGGAGGGAGTCGTCTCAGTTCTGTGACACACTGGCCTGATACCCT
ACAGCCTCAGAAGAGGAATGGGGGACAGCCGTTTTCTGTGCAAGCTCTTTCACTACATTTCCTC
CCCTTACACAGCCTATCCAGTGATCTGGATGTGATAGTCAAAGCAAATAAGTAGTTTGTGTCTG
GGATAGGCAGTCCCTCCCCTCTCTTCCTGACCCCTCCTCTGTATCCCAACAGAGAGCAACATAT
TAGTTACTGGAAAGTCATTGGTTCCCGTGTGGGGTCACATGGCACAGCACCGGGACGAGGTGGG
ACAGTCTGAACTTTTAGCTTTTCCTCTTGGACTTTGGGGGAGCTTTCGAAGCACTCAGTTTCAC
CCCGAGTTTTCAGAAGACTCAGTGACAAGCTGTGTGAGCTGCTTTTGTTTGAGAGAGTCGTAGC
TCTCACGTCTCCTGGAGTGTCCACTTCAGTGCCTTGTCTGAGACTTTCCAATAGCAAGACTAGC
ATATCCTGGAATCCTCCAGAGCACGCTTAAATGTGTTTGCAGTATACAGTCATATTCAGGATGC
TTTACGGACCCCCAAGGACACTGAGTAGGTTTTTTTTTTTTTTATTTATGGTGTGTATTATAAA
AGGATAGGGGAGAAAAACCTTACCAAGTTTTTCTATGTTATTTTAAATGTCAACTCTGAGGTAT
CAGATGAATTTTTCTTAACCATATTGGATTGCAGTTATCATTCGCTAGTGTAAGACTCCTGGAA
CTCTGACTGTTGGGTAAACCTCCAAACCCTGTGATTTTCTTTAGGGCAAATTAAAATTTTATAG
GGGAGTTTGGAAACTTTTTACATGCATATTTGTAGACATTTAGGGGTGTTGTTTTGTTTTGGAA
GTTTGGTAAAAGACGTCTGCTTTTCTTACTAAAGTGATGTTTCCCTGAGACAAGAGGGAGTCTC
ACAGATTCAGAGGCGGGGTCGCTGAGCGTAGCCCTTTGCCCTCTGACTTCATAAGTTAGCAACA
GGCAGACATCAAATGTTTTTGATCCTAGCGTGTGTGGTTTATTTTTTATCTTAACTTTTTCACT
TTTGAAGTGTAAAGCATTTTGACTTTTTTAAAATGTTATTTTCTATGATATCTTATTCCTAAAA
CTGGTACTAGTCTGTAATCTGTGAATTGTATATTGTGCCTCTCTCAGAGGGGTAGCGATCTGGG
GTTGCATGCTGGTATCTGTGAGGAAATCACCTTTGTAAAGTGAAGCTGAAATTGGGCGATGGGG
AGTTTGTGTTTTATCTAAGCATACCTTTATGGGCATACTTTAAATGTTCCGGATTTGGTGGTCA
GAGCAGCTAGATTTAAATTGGATGGAAGCAAAACTGATCTCTTCTGGGTCATGCATTTTGTGGT
AAGAAGGAAGGCAGCCAGGGGCACTGTTACTGCAGACTACAGATCATGAAAGGGCCTGGGGGAA
CTACAGAATGAAGTCTATCGAGTGGTGTAGAATGATGACCTTCAGACATTCCCTGTCATAATAT
GAAATATGGTAATTCCATGTTATGTATCTCTCCTAATACAGACATACCATCACCCCCTTTTGCC
CAGATTTGCCCCAGCTTTCTTGCTTATGGGCGCTAGTTGAACCCCCAGCCAGCACACCTGGGGT
GCACACCCACTGCTCAGCTCAAAGGGCATGTCTTTGCCTGCTTGTCAGGACCCTTCCCGATGAA
GCAGCCTGTATGCTTGACTTCCTTATCAAGGCTGTCACGTAGAGACTGAAGAGTCTGTCTTCTG
TTTTCTGCCTCCAACACAGCCCTTCTCCTTTTGACCCAGTCTGTCCCATGACTCTGAGATAGCC
GCAGGAGCTGCATTGAGAAACTGTATGCTGCGTTCAGAGTTCACCATTGTAGACAAATTTACAC
ACCTCAGAAGATGACAGGCCCTCTTGCTTGAAGATTCCACTGCAGGCTTGACCTGGAGATCTGC
CTTCGTGCAATTCTTGGTTATGGTGCTGGATGGATTCCAATCCCCACACACTGTGATCCAGGAA
GGGAAGGCAACTCCATTCTCAGTTCCACATTTATTTCCCCAAATTCCCTAGGGTGCCTTTCTTT
ACAAAATGGGTACAATAAATAAGCTAGACCACAAGACACATTCTCCATGTTTCTTTCAGGAAGC
ATTTGGGTATTGTAAGAATTCTTCTTAGGAAACCTAGGAAGACAATGGAAGTCTATGGTTCTTC
AGAAACTGAAGCAACTTGAGTCAATGGTGGGAGTTATTTTATCCCTGAGATGGTAGCTTGGTGG
CTCCTTGTTCTGGTAAGGTCTGTACTCAATTGTGTCTCCTGGCATAATCACAGAAACTGCAGAT
AAGATGTTCTGGAAATCCTGGGATCTTACCTGTAACGGGATCTTCCGGAGTCACTCAAAGACGA
TGTGGCAGCGAGGAGGACAACAGGCAAGAGAGGACTGGTTTCTCTGGCTGAGGGCTGTGAGGTA
CCCACAGCTCCATCAGCAAAGCTGTGTGTGTTTCCACGGTGTCGCTGCTAGTTCCCAGAGACCC
CTGGGGCCCAAGGACTTCTAGAATGCACACGTGATGCTGTTACACTTCTGCTTTAATGTGAACA
TTCAACTGACCGGGCTTGACGTCACTGTATGCCTAAATGTGCCTTGTCCAGAAACTTCTGCATG
TTTGTAAGAACTATTTTTGTATACATTGGTAGAGGGGAGATGCACTTTAAAAAAATCACAAGAA
TGGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGAAGAGAATGGTT
TCTTTGTATCTCAAAAGTGAAAATGTAATAAATACAGAAAAAAAAACTTTCTTCAATTTTTTAG
CATTGGAA

hide sequence

RefSeq Acc Id:

XM_006253216 ⟹ XP_006253278

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	63,534,034 - 63,545,683 (-)	NCBI
mRatBN7.2	16	56,830,011 - 56,842,393 (-)	NCBI
Rnor_6.0	16	60,415,192 - 60,427,498 (-)	NCBI
Rnor_5.0	16	60,089,230 - 60,101,526 (-)	NCBI

Sequence:

show sequence

AGCACCCTTAGTAGGGAGAGGTGGCTGGAAAGTTAAAGGGCGCCACGGGCTGCTGGAGCCAGAA
TCCAGAGTGCTGAAAGCCAGAGAGCAGACTTCTAGCCTGCCCCTCTAACGTGATGGCCGTGGAC
ATAGAATACAGCTACAGCAGTATGGCCCCTTCTCTGCGCAGAGAGCGCTTCACCTTCAAGATCT
CCCCCAAACTGAACAAGCCACTGAGGCCTTGTATTCAGCTGGGCAGCAAGGATGAAGCCGGCAG
AATGGTGGCCCCCACAGTGCAGGAGAAGAAGGTGAAGAAGCGGGTGTCCTTCGCCGACAACCAG
GGGCTGGCCCTAACAATGGTGAAAGTGTTCTCGGAATTCGATGACCCACTAGATATTCCGTTTA
ACATCACTGAGCTCCTAGACAACATCGTGAGTCTGACGACAGCAGAGAGTGAGAGCTTTGTTTT
GGATTTTCCGCAGCCTTCTGCAGATTACTTAGACTTTAGAAATCGGCTTCAGACCAACCATGTC
TGCCTCGAAAACTGCGTGCTGAAGGAGAAAGCCATCGCGGGCACCGTCAAGGTCCAGAACCTGG
CATTCGAGAAGGTTGTGAAGATCAGGATGACATTCGATACCTGGAAAAGCTTCACAGACTTCCC
TTGTCAGTATGTGAAGGACACTTACGCTGGTTCAGACAGGGACACATTCTCCTTTGATATCAGC
CTACCGGAGAAAATCCAGTCTTATGAAAGAATGGAGTTCGCCGTGTGCTACGAGTGTAACGGCC
AGTCGTACTGGGACAGCAACAAAGGCAAAAACTACAGGATCACCAGGGCCGAACTCAGATCCAC
CCAGGGAATGACTGAGCCGTACAATGGGCCGGATTTTGGAATCTCTTTTGACCAGTTCGGGAGC
CCTCGGTGTTCCTTCGGCCTGTTTCCAGAGTGGCCTAGTTATCTGGGGTATGAAAAGCTGGGGC
CCTATTACTAGTGAGTTGACTGCAGTTGACAGTCTGTGTCTCTGATCAAGGTGGAGGTGAGAAC
GCGAGGCCAGAGGGAAGTTGATCTGCCATTAGGCGTGGTTTTTGAAAAGACAGGATCCTGTTCA
CCTTTTTCTCAAACCGGCAAGTCCAGTGTGCTTCCATCACGCCTGGTTTCTTGCTCAGAGGAGA
GGAGGCGTGCTGAACCTCTGTGGTATCCGGGTTGGCCACAAGGGAATGCACAGGATGGTGCCAG
AAGGGTCTGGAGAGGAGCCAAGCTGGCAAGGACAGAAAGCTGGCCTCCCTTCCACACTTGGTCT
TCGAAAGTCACCCAGAAACCAGGCTCCAGCCTTTTCCAGCCTTACAGTTGACCTCGAGGTCCTG
CCCTGCCCATGGCTTTCCAAGTGTCTCCTTCATTCCACACGGACTCGGAGGGAGTCGTCTCAGT
TCTGTGACACACTGGCCTGATACCCTACAGCCTCAGAAGAGGAATGGGGGACAGCCGTTTTCTG
TGCAAGCTCTTTCACTACATTTCCTCCCCTTACACAGCCTATCCAGTGATCTGGATGTGATAGT
CAAAGCAAATAAGTAGTTTGTGTCTGGGATAGGCAGTCCCTCCCCTCTCTTCCTGACCCCTCCT
CTGTATCCCAACAGAGAGCAACATATTAGTTACTGGAAAGTCATTGGTTCCCGTGTGGGGTCAC
ATGGCACAGCACCGGGACGAGGTGGGACAGTCTGAACTTTTAGCTTTTCCTCTTGGACTTTGGG
GGAGCTTTCGAAGCACTCAGTTTCACCCCGAGTTTTCAGAAGACTCAGTGACAAGCTGTGTGAG
CTGCTTTTGTTTGAGAGAGTCGTAGCTCTCACGTCTCCTGGAGTGTCCACTTCAGTGCCTTGTC
TGAGACTTTCCAATAGCAAGACTAGCATATCCTGGAATCCTCCAGAGCACGCTTAAATGTGTTT
GCAGTATACAGTCATATTCAGGATGCTTTACGGACCCCCAAGGACACTGAGTAGGTTTTTTTTT
TTTTTATTTATGGTGTGTATTATAAAAGGATAGGGGAGAAAAACCTTACCAAGTTTTTCTATGT
TATTTTAAATGTCAACTCTGAGGTATCAGATGAATTTTTCTTAACCATATTGGATTGCAGTTAT
CATTCGCTAGTGTAAGACTCCTGGAACTCTGACTGTTGGGTAAACCTCCAAACCCTGTGATTTT
CTTTAGGGCAAATTAAAATTTTATAGGGGAGTTTGGAAACTTTTTACATGCATATTTGTAGACA
TTTAGGGGTGTTGTTTTGTTTTGGAAGTTTGGTAAAAGACGTCTGCTTTTCTTACTAAAGTGAT
GTTTCCCTGAGACAAGAGGGAGTCTCACAGATTCAGAGGCGGGGTCGCTGAGCGTAGCCCTTTG
CCCTCTGACTTCATAAGTTAGCAACAGGCAGACATCAAATGTTTTTGATCCTAGCGTGTGTGGT
TTATTTTTTATCTTAACTTTTTCACTTTTGAAGTGTAAAGCATTTTGACTTTTTTAAAATGTTA
TTTTCTATGATATCTTATTCCTAAAACTGGTACTAGTCTGTAATCTGTGAATTGTATATTGTGC
CTCTCTCAGAGGGGTAGCGATCTGGGGTTGCATGCTGGTATCTGTGAGGAAATCACCTTTGTAA
AGTGAAGCTGAAATTGGGCGATGGGGAGTTTGTGTTTTATCTAAGCATACCTTTATGGGCATAC
TTTAAATGTTCCGGATTTGGTGGTCAGAGCAGCTAGATTTAAATTGGATGGAAGCAAAACTGAT
CTCTTCTGGGTCATGCATTTTGTGGTAAGAAGGAAGGCAGCCAGGGGCACTGTTACTGCAGACT
ACAGATCATGAAAGGGCCTGGGGGAACTACAGAATGAAGTCTATCGAGTGGTGTAGAATGATGA
CCTTCAGACATTCCCTGTCATAATATGAAATATGGTAATTCCATGTTATGTATCTCTCCTAATA
CAGACATACCATCACCCCCTTTTGCCCAGATTTGCCCCAGCTTTCTTGCTTATGGGCGCTAGTT
GAACCCCCAGCCAGCACACCTGGGGTGCACACCCACTGCTCAGCTCAAAGGGCATGTCTTTGCC
TGCTTGTCAGGACCCTTCCCGATGAAGCAGCCTGTATGCTTGACTTCCTTATCAAGGCTGTCAC
GTAGAGACTGAAGAGTCTGTCTTCTGTTTTCTGCCTCCAACACAGCCCTTCTCCTTTTGACCCA
GTCTGTCCCATGACTCTGAGATAGCCGCAGGAGCTGCATTGAGAAACTGTATGCTGCGTTCAGA
GTTCACCATTGTAGACAAATTTACACACCTCAGAAGATGACAGGCCCTCTTGCTTGAAGATTCC
ACTGCAGGCTTGACCTGGAGATCTGCCTTCGTGCAATTCTTGGTTATGGTGCTGGATGGATTCC
AATCCCCACACACTGTGATCCAGGAAGGGAAGGCAACTCCATTCTCAGTTCCACATTTATTTCC
CCAAATTCCCTAGGGTGCCTTTCTTTACAAAATGGGTACAATAAATAAGCTAGACCACAAGACA
CATTCTCCATGTTTCTTTCAGGAAGCATTTGGGTATTGTAAGAATTCTTCTTAGGAAACCTAGG
AAGACAATGGAAGTCTATGGTTCTTCAGAAACTGAAGCAACTTGAGTCAATGGTGGGAGTTATT
TTATCCCTGAGATGGTAGCTTGGTGGCTCCTTGTTCTGGTAAGGTCTGTACTCAATTGTGTCTC
CTGGCATAATCACAGAAACTGCAGATAAGATGTTCTGGAAATCCTGGGATCTTACCTGTAACGG
GATCTTCCGGAGTCACTCAAAGACGATGTGGCAGCGAGGAGGACAACAGGCAAGAGAGGACTGG
TTTCTCTGGCTGAGGGCTGTGAGGTACCCACAGCTCCATCAGCAAAGCTGTGTGTGTTTCCACG
GTGTCGCTGCTAGTTCCCAGAGACCCCTGGGGCCCAAGGACTTCTAGAATGCACACGTGATGCT
GTTACACTTCTGCTTTAATGTGAACATTCAACTGACCGGGCTTGACGTCACTGTATGCCTAAAT
GTGCCTTGTCCAGAAACTTCTGCATGTTTGTAAGAACTATTTTTGTATACATTGGTAGAGGGGA
GATGCACTTTAAAAAAATCACAAGAATGGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGGTGGAAGAGAATGGTTTCTTTGTATCTCAAAAGTGAAAATGTAATAAATACAGA
AAAAAAAACTTTCTTCAATTTTTTAGCATTGGAA

hide sequence

RefSeq Acc Id:

XR_010058276

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	63,541,790 - 63,545,466 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001421361	(Get FASTA)	NCBI Sequence Viewer
	NP_001421362	(Get FASTA)	NCBI Sequence Viewer
	NP_620267	(Get FASTA)	NCBI Sequence Viewer
	XP_006253277	(Get FASTA)	NCBI Sequence Viewer
	XP_006253278	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH72514	(Get FASTA)	NCBI Sequence Viewer
	CAA77083	(Get FASTA)	NCBI Sequence Viewer
	EDM09191	(Get FASTA)	NCBI Sequence Viewer
	EDM09192	(Get FASTA)	NCBI Sequence Viewer
	EDM09193	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000042713
	ENSRNOP00000042713.2
	ENSRNOP00000108106
GenBank Protein	Q6IN01	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_620267 ⟸ NM_138912

- UniProtKB:

Q63759 (UniProtKB/Swiss-Prot), Q6IN01 (UniProtKB/Swiss-Prot), A6IVM9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAVDIEYSYSSMAPSLRRERFTFKISPKLNKPLRPCIQLGSKDEAGRMVAPTVQEKKVKKRVSF
ADNQGLALTMVKVFSEFDDPLDIPFNITELLDNIVSLTTAESESFVLDFPQPSADYLDFRNRLQ
TNHVCLENCVLKEKAIAGTVKVQNLAFEKVVKIRMTFDTWKSFTDFPCQYVKDTYAGSDRDTFS
FDISLPEKIQSYERMEFAVCYECNGQSYWDSNKGKNYRITRAELRSTQGMTEPYNGPDFGISFD
QFGSPRCSFGLFPEWPSYLGYEKLGPYY

hide sequence

RefSeq Acc Id:

XP_006253278 ⟸ XM_006253216

- Peptide Label:

isoform X1

- Sequence:

show sequence

MAVDIEYSYSSMAPSLRRERFTFKISPKLNKPLRPCIQLGSKDEAGRMVAPTVQEKKVKKRVSF
ADNQGLALTMVKVFSEFDDPLDIPFNITELLDNIVSLTTAESESFVLDFPQPSADYLDFRNRLQ
TNHVCLENCVLKEKAIAGTVKVQNLAFEKVVKIRMTFDTWKSFTDFPCQYVKDTYAGSDRDTFS
FDISLPEKIQSYERMEFAVCYECNGQSYWDSNKGKNYRITRAELRSTQGMTEPYNGPDFGISFD
QFGSPRCSFGLFPEWPSYLGYEKLGPYY

hide sequence

RefSeq Acc Id:

XP_006253277 ⟸ XM_006253215

- Peptide Label:

isoform X1

- Sequence:

show sequence

MAVDIEYSYSSMAPSLRRERFTFKISPKLNKPLRPCIQLGSKDEAGRMVAPTVQEKKVKKRVSF
ADNQGLALTMVKVFSEFDDPLDIPFNITELLDNIVSLTTAESESFVLDFPQPSADYLDFRNRLQ
TNHVCLENCVLKEKAIAGTVKVQNLAFEKVVKIRMTFDTWKSFTDFPCQYVKDTYAGSDRDTFS
FDISLPEKIQSYERMEFAVCYECNGQSYWDSNKGKNYRITRAELRSTQGMTEPYNGPDFGISFD
QFGSPRCSFGLFPEWPSYLGYEKLGPYY

hide sequence

Ensembl Acc Id:

ENSRNOP00000070738 ⟸ ENSRNOT00000082091

Ensembl Acc Id:

ENSRNOP00000042713 ⟸ ENSRNOT00000051720

Protein Domains

CBM21

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q6IN01-F1-model_v2	AlphaFold	Q6IN01	1-284	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13700142

Promoter ID:

EPDNEW_R10657

Type:

multiple initiation site

Name:

Ppp1r3b_1

Description:

protein phosphatase 1, regulatory subunit 3B

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_R10658

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	16	60,426,588 - 60,426,648	EPDNEW

RGD ID:

13700134

Promoter ID:

EPDNEW_R10658

Type:

initiation region

Name:

Ppp1r3b_2

Description:

protein phosphatase 1, regulatory subunit 3B

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_R10657

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	16	60,427,438 - 60,427,498	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:621600	AgrOrtholog
BioCyc Gene	G2FUF-11159	BioCyc
Ensembl Genes	ENSRNOG00000011474	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000051720	ENTREZGENE
	ENSRNOT00000051720.3	UniProtKB/Swiss-Prot
	ENSRNOT00000148975	ENTREZGENE
Gene3D-CATH	2.60.40.2440	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7104413	IMAGE-MGC_LOAD
InterPro	CBM21_dom	UniProtKB/Swiss-Prot
	CBM21_dom_sf	UniProtKB/Swiss-Prot
	Pase-1_reg-su_3B/C/D_met	UniProtKB/Swiss-Prot
	PP1_3B	UniProtKB/Swiss-Prot
	PP1_regulatory_subunit_3	UniProtKB/Swiss-Prot
KEGG Report	rno:192280	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:91481	IMAGE-MGC_LOAD
NCBI Gene	192280	ENTREZGENE
PANTHER	PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT	UniProtKB/Swiss-Prot
	PTHR12307:SF13	UniProtKB/Swiss-Prot
Pfam	CBM_21	UniProtKB/Swiss-Prot
PhenoGen	Ppp1r3b	PhenoGen
PIRSF	PP1_GL	UniProtKB/Swiss-Prot
	PP1_GT_animal	UniProtKB/Swiss-Prot
PROSITE	CBM21	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000011474	RatGTEx
UniProt	A6IVM9	ENTREZGENE, UniProtKB/TrEMBL
	PPR3B_RAT	UniProtKB/Swiss-Prot
	Q63759	ENTREZGENE
	Q6IN01	ENTREZGENE
UniProt Secondary	Q63759	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2011-10-18	Ppp1r3b	protein phosphatase 1, regulatory subunit 3B	Ppp1r3b	protein phosphatase 1, regulatory (inhibitor) subunit 3B	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2004-09-10	Ppp1r3b	protein phosphatase 1, regulatory (inhibitor) subunit 3B	Loc192280	protein phosphatase 1 (GL-subunit)	Symbol and Name updated	1299863	APPROVED
2002-08-07	Loc192280	protein phosphatase 1 (GL-subunit)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

RGD Manual Annotations

Imported Annotations - KEGG (archival)

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

RGD Manual Annotations

Imported Annotations - KEGG (archival)