Calcr (calcitonin receptor) - Rat Genome Database

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Gene: Calcr (calcitonin receptor) Rattus norvegicus
Analyze
Symbol: Calcr
Name: calcitonin receptor
RGD ID: 621001
Description: Enables calcitonin binding activity and calcitonin receptor activity. Involved in several processes, including adenylate cyclase-modulating G protein-coupled receptor signaling pathway; cellular response to transforming growth factor beta stimulus; and cellular response to tumor necrosis factor. Located in axon and neuronal cell body. Human ortholog(s) of this gene implicated in osteoporosis. Orthologous to human CALCR (calcitonin receptor); INTERACTS WITH ammonium chloride; amphetamine; benzo[a]pyrene.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: C1A/C1B; CT-R
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Candidate Gene For: Vie1
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8432,615,955 - 32,691,075 (-)NCBIGRCr8
mRatBN7.2431,661,270 - 31,736,392 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl431,661,273 - 31,736,392 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx436,633,979 - 36,709,091 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0432,560,089 - 32,635,205 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0430,919,584 - 30,995,051 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0428,627,439 - 28,702,559 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl428,627,442 - 28,702,559 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0428,532,077 - 28,607,201 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4428,486,176 - 28,561,296 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1428,501,581 - 28,574,979 (-)NCBI
Celera427,047,821 - 27,123,526 (-)NCBICelera
Cytogenetic Map4q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. The calcitonin receptor gene is a candidate for regulation of susceptibility to herpes simplex type 1 neuronal infection leading to encephalitis in rat. Abdelmagid N, etal., PLoS Pathog. 2012;8(6):e1002753. doi: 10.1371/journal.ppat.1002753. Epub 2012 Jun 28.
2. Molecular cloning of two receptors from rat brain with high affinity for salmon calcitonin. Albrandt K, etal., FEBS Lett 1993 Jul 5;325(3):225-32.
3. Immunohistochemical mapping of calcitonin receptors in the adult rat brain. Becskei C, etal., Brain Res. 2004 Dec 31;1030(2):221-33.
4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
5. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
6. Divergent structural requirements exist for calcitonin receptor binding specificity and adenylate cyclase activation. Houssami S, etal., Mol Pharmacol. 1995 Apr;47(4):798-809.
7. Characterization and identification of subpopulations of mononuclear preosteoclasts induced by TNF-α in combination with TGF-β in rats. Matsubara R, etal., PLoS One. 2012;7(10):e47930. doi: 10.1371/journal.pone.0047930. Epub 2012 Oct 24.
8. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
9. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
10. A new calcitonin-receptor-like sequence in rat pulmonary blood vessels. Njuki F, etal., Clin Sci (Lond) 1993 Oct;85(4):385-8.
11. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
12. Online Mendelian Inheritance in Man, OMIM (TM). Online Mendelian Inheritance in Man, OMIM (TM).
13. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
14. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
15. Identification of brain isoforms of the rat calcitonin receptor. Sexton PM, etal., Mol Endocrinol 1993 Jun;7(6):815-21.
16. Ontogeny of calcitonin receptor mRNA and protein in the developing central nervous system of the rat. Tolcos M, etal., J Comp Neurol 2003 Jan 27;456(1):29-38.
17. Association between osteoporosis and polymorphisms of the bone Gla protein, estrogen receptor 1, collagen 1-A1 and calcitonin receptor genes in Turkish postmenopausal women. Tural S, etal., Gene. 2013 Feb 15;515(1):167-72. doi: 10.1016/j.gene.2012.10.041. Epub 2012 Nov 5.
Additional References at PubMed
PMID:796748   PMID:4961748   PMID:7588285   PMID:7619207   PMID:7664679   PMID:7769107   PMID:7961748   PMID:7988453   PMID:8078488   PMID:9002981   PMID:9753683   PMID:10882736  
PMID:11250927   PMID:12631107   PMID:12704735   PMID:14715154   PMID:14722252   PMID:14970190   PMID:15563840   PMID:15670850   PMID:18599553   PMID:22500019   PMID:24516262   PMID:24801386  


Genomics

Comparative Map Data
Calcr
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8432,615,955 - 32,691,075 (-)NCBIGRCr8
mRatBN7.2431,661,270 - 31,736,392 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl431,661,273 - 31,736,392 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx436,633,979 - 36,709,091 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0432,560,089 - 32,635,205 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0430,919,584 - 30,995,051 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0428,627,439 - 28,702,559 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl428,627,442 - 28,702,559 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0428,532,077 - 28,607,201 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4428,486,176 - 28,561,296 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1428,501,581 - 28,574,979 (-)NCBI
Celera427,047,821 - 27,123,526 (-)NCBICelera
Cytogenetic Map4q13NCBI
CALCR
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38793,424,486 - 93,574,724 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl793,424,486 - 93,574,730 (-)EnsemblGRCh38hg38GRCh38
GRCh37793,053,798 - 93,204,036 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36792,891,735 - 93,041,686 (-)NCBINCBI36Build 36hg18NCBI36
Build 34792,698,449 - 92,848,401NCBI
Celera787,758,299 - 87,908,414 (-)NCBICelera
Cytogenetic Map7q21.3NCBI
HuRef787,664,656 - 87,814,674 (-)NCBIHuRef
CHM1_1792,983,802 - 93,134,094 (-)NCBICHM1_1
T2T-CHM13v2.0794,666,953 - 94,817,060 (-)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v2792,383,112 - 92,533,218 (-)NCBI
Calcr
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3963,685,678 - 3,764,713 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl63,685,680 - 3,764,714 (-)EnsemblGRCm39 Ensembl
GRCm3863,685,678 - 3,764,713 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl63,685,680 - 3,764,714 (-)EnsemblGRCm38mm10GRCm38
MGSCv3763,635,720 - 3,714,713 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3663,635,734 - 3,718,616 (-)NCBIMGSCv36mm8
Celera63,838,106 - 3,917,223 (-)NCBICelera
Cytogenetic Map6A1NCBI
cM Map61.81NCBI
Calcr
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543210,309,263 - 10,391,141 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543210,310,776 - 10,391,029 (-)NCBIChiLan1.0ChiLan1.0
CALCR
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26111,269,609 - 111,419,724 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan17159,534,252 - 159,684,366 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0785,382,167 - 85,532,562 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1798,975,906 - 99,125,841 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl798,975,906 - 99,047,162 (-)Ensemblpanpan1.1panPan2
CALCR
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11418,923,116 - 19,074,904 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1418,923,116 - 19,074,904 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1418,482,050 - 18,633,756 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01418,730,002 - 18,888,306 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1418,729,945 - 18,888,301 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11418,889,119 - 19,040,277 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01418,624,883 - 18,776,465 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01418,875,566 - 19,033,608 (-)NCBIUU_Cfam_GSD_1.0
Calcr
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511832,331,279 - 32,443,389 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936803422,890 - 466,730 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936803423,558 - 466,762 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CALCR
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl973,279,879 - 73,403,436 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1973,279,874 - 73,403,516 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2980,112,418 - 80,234,372 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Pig Cytomap9q11-q12NCBI
CALCR
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12155,433,438 - 55,585,608 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2155,523,412 - 55,583,735 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604248,721,181 - 48,873,559 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Calcr
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624813233,042 - 357,396 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624813233,117 - 357,507 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Calcr
242 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1120
Count of miRNA genes:266
Interacting mature miRNAs:333
Transcripts:ENSRNOT00000013910, ENSRNOT00000013937
Prediction methods:Microtar, Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2302371Stl22Serum triglyceride level QTL 225.15blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)4521829457114705Rat
2303585Bw86Body weight QTL 864body mass (VT:0001259)body weight (CMO:0000012)41467806559678065Rat
8552903Pigfal2Plasma insulin-like growth factor 1 level QTL 27.3blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)4131934116Rat
9590100Sffal4Serum free fatty acids level QTL 47.360.05blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)4131934116Rat
8552906Pigfal3Plasma insulin-like growth factor 1 level QTL 3blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)41008408955084089Rat
1357341Gluco5Glucose level QTL 56.4adipocyte free fatty acid secretion trait (VT:0010465)absolute change in adipocyte free fatty acid secretion per unit volume (CMO:0001446)4133250345Rat
10755501Bp390Blood pressure QTL 3902.5arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)426775591168368347Rat
1357343Gluco4Glucose level QTL 40.00002adipocyte glucose uptake trait (VT:0004185)adipocyte maximal glucose uptake to basal glucose uptake ratio (CMO:0000874)4133250345Rat
6478766Anxrr47Anxiety related response QTL 470.09637locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)41008408955084089Rat
70222Eae2Experimental allergic encephalomyelitis QTL 24.3nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)42133334339505420Rat
631642Stl2Serum triglyceride level QTL 23.3blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)4521917856647776Rat
6478769Anxrr48Anxiety related response QTL 480.02514locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)41008408955084089Rat
631261Tcas3Tongue tumor susceptibility QTL 36.88tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)41081417091360527Rat
634323Hc2Hypercalciuria QTL 22.15urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)421079645210796Rat
2313401Anxrr27Anxiety related response QTL 27aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)41793350862933508Rat
631209Bw2Body weight QTL24.2retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)4994088544463908Rat
8552803Bw144Body weight QTL 14416body mass (VT:0001259)change in body weight to body weight ratio (CMO:0002216)42271068534430484Rat
6909128Pancm4Pancreatic morphology QTL 411.35pancreas mass (VT:0010144)pancreas wet weight (CMO:0000626)42690728575585128Rat
8694374Bw155Body weight QTL 1553.390.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)41008408955084089Rat
2303168Bp330Blood pressure QTL 3304.250.017arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)45214602146446691Rat
9589046Scfw2Subcutaneous fat weight QTL 25.540.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)4131934116Rat
61412Pia2Pristane induced arthritis QTL 23.9joint integrity trait (VT:0010548)post-insult time to onset of experimental arthritis (CMO:0001450)42133334362278020Rat
6478724Anxrr35Anxiety related response QTL 350.00449defecation behavior trait (VT:0010462)defecation measurement (CMO:0000997)41008408955084089Rat
8655906Rf60Renal function QTL 603.8blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)42949419581006281Rat
61415Eae11Experimental allergic encephalomyelitis QTL 112.9nervous system integrity trait (VT:0010566)post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422)4139505420Rat
619616Bp79Blood pressure QTL 790.0292arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)4521460278882945Rat
7387227Uae40Urinary albumin excretion QTL 402.90.0052urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)41794699962946999Rat
6909122Insul22Insulin level QTL 224.63blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)42690728575585128Rat
738021Hcar13Hepatocarcinoma resistance QTL 134.3liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)4132584199Rat
1358203Stl19Serum triglyceride level QTL 192.80.002blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)4521829465958103Rat
9590304Scort17Serum corticosterone level QTL 174.960.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)41008408955084089Rat
9589097Slep11Serum leptin concentration QTL 115.090.001blood leptin amount (VT:0005667)plasma leptin level (CMO:0000781)4131934116Rat
2316958Gluco58Glucose level QTL 5810blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)411320076180699135Rat
1354665Stl10Serum triglyceride level QTL 103.57blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)42133334344463908Rat
1300141Bp178Blood pressure QTL 178arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)41002490139524530Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
2 11 1 99 22 30 9 2 9 6 77 13 92 45 46 21

Sequence


Ensembl Acc Id: ENSRNOT00000013910   ⟹   ENSRNOP00000013910
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl431,661,273 - 31,736,392 (-)Ensembl
Rnor_6.0 Ensembl428,627,442 - 28,702,559 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000013937   ⟹   ENSRNOP00000013937
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl431,661,273 - 31,736,392 (-)Ensembl
Rnor_6.0 Ensembl428,627,442 - 28,702,559 (-)Ensembl
RefSeq Acc Id: NM_001034015   ⟹   NP_001029187
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8432,615,955 - 32,691,075 (-)NCBI
mRatBN7.2431,661,270 - 31,736,392 (-)NCBI
Rnor_6.0428,627,439 - 28,702,559 (-)NCBI
Rnor_5.0428,532,077 - 28,607,201 (-)NCBI
RGSC_v3.4428,486,176 - 28,561,296 (-)RGD
Celera427,047,821 - 27,123,526 (-)RGD
Sequence:
RefSeq Acc Id: NM_053816   ⟹   NP_446268
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8432,615,955 - 32,691,075 (-)NCBI
mRatBN7.2431,661,270 - 31,736,392 (-)NCBI
Rnor_6.0428,627,439 - 28,702,559 (-)NCBI
Rnor_5.0428,532,077 - 28,607,201 (-)NCBI
RGSC_v3.4428,486,176 - 28,561,296 (-)RGD
Celera427,047,821 - 27,123,526 (-)RGD
Sequence:
RefSeq Acc Id: NP_001029187   ⟸   NM_001034015
- Peptide Label: isoform 1a precursor
- UniProtKB: A0A0H2UHI3 (UniProtKB/TrEMBL),   A6K2A3 (UniProtKB/TrEMBL),   A6K2A6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_446268   ⟸   NM_053816
- Peptide Label: isoform 1b precursor
- UniProtKB: P32213 (UniProtKB/Swiss-Prot),   P32214 (UniProtKB/Swiss-Prot),   A0A0H2UHI1 (UniProtKB/TrEMBL),   A6K2A4 (UniProtKB/TrEMBL),   A6K2A7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000013937   ⟸   ENSRNOT00000013937
Ensembl Acc Id: ENSRNOP00000013910   ⟸   ENSRNOT00000013910
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P32214-F1-model_v2 AlphaFold P32214 1-516 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:621001 AgrOrtholog
BioCyc Gene G2FUF-45737 BioCyc
Ensembl Genes ENSRNOG00000010053 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000013910.8 UniProtKB/TrEMBL
  ENSRNOT00000013937.6 UniProtKB/TrEMBL
Gene3D-CATH 4.10.1240.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Rhodopsin 7-helix transmembrane proteins UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro GCPR_2_calcitonin_rcpt_fam UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_2-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_2_calcitonin_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_2_extracell_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_2_extracellular_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_2_secretin-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_2_secretin-like_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:116506 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 116506 ENTREZGENE
PANTHER PDF RECEPTOR-LIKE PROTEIN-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR45620:SF8 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam 7tm_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HRM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Calcr PhenoGen
PRINTS CALCITONINR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CTRFAMILY UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCRSECRETIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F2_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F2_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F2_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F2_4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000010053 RatGTEx
SMART HormR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF111418 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0H2UHI1 ENTREZGENE, UniProtKB/TrEMBL
  A0A0H2UHI3 ENTREZGENE, UniProtKB/TrEMBL
  A6K2A3 ENTREZGENE, UniProtKB/TrEMBL
  A6K2A4 ENTREZGENE, UniProtKB/TrEMBL
  A6K2A6 ENTREZGENE, UniProtKB/TrEMBL
  A6K2A7 ENTREZGENE, UniProtKB/TrEMBL
  CALCR_RAT UniProtKB/Swiss-Prot
  P32213 ENTREZGENE
  P32214 ENTREZGENE
UniProt Secondary P32213 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2004-09-10 Calcr  calcitonin receptor      Symbol and Name status set to approved 1299863 APPROVED
2002-08-07 Calcr  calcitonin receptor      Symbol and Name status set to provisional 70820 PROVISIONAL