Septin7 (septin 7) - Rat Genome Database

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Gene: Septin7 (septin 7) Rattus norvegicus
Analyze
Symbol: Septin7
Name: septin 7
RGD ID: 620469
Description: A structural constituent of postsynapse. Involved in postsynapse organization. Is active in glutamatergic synapse and postsynaptic septin cytoskeleton. Orthologous to human SEPTIN7 (septin 7); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; amitrole; ammonium chloride.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: Cdc10; CDC10 (cell division cycle 10, S.cerevisiae, homolog); CDC10 protein homolog; Sept7; septin-7
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8831,995,597 - 32,059,069 (+)NCBIGRCr8
mRatBN7.2823,719,448 - 23,783,247 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl823,716,030 - 23,783,243 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx827,778,155 - 27,841,415 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0826,075,443 - 26,138,703 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0823,944,735 - 24,008,197 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0826,412,910 - 26,476,615 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl826,413,233 - 26,476,611 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0826,434,684 - 26,498,715 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4824,924,747 - 24,988,221 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1824,924,783 - 24,987,286 (+)NCBI
Celera825,288,734 - 25,351,965 (+)NCBICelera
Cytogenetic Map8q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. Molecular cloning of a novel human cDNA homologous to CDC10 in Saccharomyces cerevisiae. Nakatsuru S, etal., Biochem Biophys Res Commun 1994 Jul 15;202(1):82-7.
4. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
5. GOA pipeline RGD automated data pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Role of Septin cytoskeleton in spine morphogenesis and dendrite development in neurons. Tada T, etal., Curr Biol. 2007 Oct 23;17(20):1752-8. doi: 10.1016/j.cub.2007.09.039. Epub 2007 Oct 11.
8. Identification of proteins in the postsynaptic density fraction by mass spectrometry. Walikonis RS, etal., J Neurosci 2000 Jun 1;20(11):4069-80.
9. TAOK2 Kinase Mediates PSD95 Stability and Dendritic Spine Maturation through Septin7 Phosphorylation. Yadav S, etal., Neuron. 2017 Jan 18;93(2):379-393. doi: 10.1016/j.neuron.2016.12.006. Epub 2017 Jan 5.
Additional References at PubMed
PMID:8889548   PMID:11064363   PMID:11739749   PMID:12477932   PMID:15485874   PMID:16641100   PMID:16854843   PMID:17634366   PMID:17935997   PMID:18809578   PMID:20458337   PMID:21767234  
PMID:22064074   PMID:22232702   PMID:22508986   PMID:22809625   PMID:22871113   PMID:23572511   PMID:24113571   PMID:25122120   PMID:25468996   PMID:25494357   PMID:25588830   PMID:29476059  
PMID:32357304  


Genomics

Comparative Map Data
Septin7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8831,995,597 - 32,059,069 (+)NCBIGRCr8
mRatBN7.2823,719,448 - 23,783,247 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl823,716,030 - 23,783,243 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx827,778,155 - 27,841,415 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0826,075,443 - 26,138,703 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0823,944,735 - 24,008,197 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0826,412,910 - 26,476,615 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl826,413,233 - 26,476,611 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0826,434,684 - 26,498,715 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4824,924,747 - 24,988,221 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1824,924,783 - 24,987,286 (+)NCBI
Celera825,288,734 - 25,351,965 (+)NCBICelera
Cytogenetic Map8q13NCBI
SEPTIN7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38735,800,986 - 35,915,763 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl735,800,932 - 35,907,110 (+)EnsemblGRCh38hg38GRCh38
GRCh37735,840,596 - 35,946,720 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36735,807,152 - 35,911,442 (+)NCBINCBI36Build 36hg18NCBI36
Celera735,824,379 - 35,928,642 (+)NCBICelera
Cytogenetic Map7p14.2NCBI
HuRef735,721,280 - 35,827,809 (+)NCBIHuRef
CHM1_1735,840,201 - 35,946,302 (+)NCBICHM1_1
T2T-CHM13v2.0735,941,987 - 36,057,268 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v2735,878,645 - 35,984,746 (+)NCBI
Septin7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39925,163,287 - 25,219,867 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl925,163,735 - 25,219,867 (+)EnsemblGRCm39 Ensembl
GRCm38925,251,991 - 25,308,571 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl925,252,439 - 25,308,571 (+)EnsemblGRCm38mm10GRCm38
MGSCv37925,060,169 - 25,116,150 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36925,002,201 - 25,058,011 (+)NCBIMGSCv36mm8
Celera922,511,513 - 22,567,507 (+)NCBICelera
Cytogenetic Map9A4NCBI
cM Map910.25NCBI
Septin7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554607,287,452 - 7,374,747 (-)NCBIChiLan1.0ChiLan1.0
SEPTIN7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2640,625,982 - 40,730,383 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1788,950,716 - 89,055,117 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0736,427,252 - 36,531,668 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1736,662,157 - 36,767,643 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl736,662,430 - 36,766,632 (+)Ensemblpanpan1.1panPan2
SEPTIN7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11447,395,704 - 47,494,873 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1447,395,603 - 47,494,385 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1446,820,663 - 46,938,583 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01447,319,527 - 47,437,496 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1447,319,483 - 47,439,846 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11447,425,320 - 47,543,217 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01447,102,710 - 47,220,654 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01447,475,957 - 47,593,931 (+)NCBIUU_Cfam_GSD_1.0
Septin7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511892,207,528 - 92,317,219 (+)NCBIHiC_Itri_2
SpeTri2.0NW_00493647811,419,334 - 11,528,954 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SEPTIN7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1838,068,303 - 38,284,645 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11838,082,626 - 38,183,354 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21841,967,902 - 42,068,925 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SEPTIN7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12122,521,109 - 22,626,464 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2122,522,127 - 22,626,504 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604282,228,173 - 82,334,085 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Septin7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474025,083,414 - 25,179,493 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Septin7
187 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:854
Count of miRNA genes:277
Interacting mature miRNAs:351
Transcripts:ENSRNOT00000008838, ENSRNOT00000063967
Prediction methods:Microtar, Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1558646Swd5Spike wave discharge measurement QTL 53.450.00036brain electrophysiology trait (VT:0010557)brain spike-and-wave discharge frequency (CMO:0001742)81490675159906751Rat
1357398Slep3Serum leptin concentration QTL 33.43blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)8971246341866876Rat
2317030Wbc5White blood cell count QTL 53.210.005leukocyte quantity (VT:0000217)white blood cell count (CMO:0000027)8873663553736635Rat
731182Uae24Urinary albumin excretion QTL 246.4urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)81933115293965294Rat
12880044Am9Aortic mass QTL 90.007aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)8209764047097640Rat
2317032Ginf2Gastrointestinal inflammation QTL 23.210.005liver integrity trait (VT:0010547)liver granuloma severity score (CMO:0002157)8470581049705810Rat
2301416Bp315Blood pressure QTL 3150.008arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)8767057852670578Rat
631650Stl6Serum triglyceride level QTL 640.0019blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)810378157112202585Rat
631842Inf1Infertility severity QTL 14.10.001seminal gland mass (VT:0010524)seminal vesicle wet weight (CMO:0001603)82266233067662330Rat
1581557Eae16Experimental allergic encephalomyelitis QTL 163.8nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)88462195110921472Rat
631271Lecl1Lens clarity QTL 10.001lens clarity trait (VT:0001304)age of onset/diagnosis of cataract (CMO:0001584)81898416884531599Rat
2317036Livw3Liver weight QTL 32.430.01liver mass (VT:0003402)liver weight to body weight ratio (CMO:0000633)8470581049705810Rat
1598824Memor4Memory QTL 42.5exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)8971222053356647Rat
12880023Bw184Body weight QTL 1840.001body mass (VT:0001259)body weight (CMO:0000012)8209764047097640Rat
9590084Insglur5Insulin/glucose ratio QTL 518.540.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)8124597739Rat
1354595Despr4Despair related QTL 42.160.0036locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)8768895552688955Rat
1354627Despr14Despair related QTL 140.0056locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)8768895552688955Rat
12880028Cm103Cardiac mass QTL 1030.02heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)8209764047097640Rat
2317051Aia18Adjuvant induced arthritis QTL 182.42joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)8873663553736635Rat
2317882Alcrsp24Alcohol response QTL 243.20.05response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)8125902202Rat
2317048Ginf1Gastrointestinal inflammation QTL 13.520.005cecum mucosa thickness (VT:0010234)enterocolitis severity score (CMO:0002138)8470581049705810Rat
2302367Slep5Serum leptin concentration QTL 53.43blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)8971246341866876Rat
12880025Cm102Cardiac mass QTL 1020.044heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)8209764047097640Rat
61373Mcs4Mammary carcinoma susceptibility QTL 41.1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)81629044461290444Rat

Markers in Region
UniSTS:236081  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2823,733,995 - 23,734,255 (+)MAPPERmRatBN7.2
Rnor_6.0826,427,366 - 26,427,625NCBIRnor6.0
Rnor_5.0826,449,236 - 26,449,495UniSTSRnor5.0
RGSC_v3.4824,938,976 - 24,939,235UniSTSRGSC3.4
Celera825,302,719 - 25,302,978UniSTS
Cytogenetic Map8q13UniSTS
CDC10_514  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.0112,765,885 - 2,766,637NCBIRnor5.0
Rnor_5.0826,497,963 - 26,498,708NCBIRnor5.0
Rnor_5.01947,257,771 - 47,258,528NCBIRnor5.0
Rnor_5.01937,730,978 - 37,731,739NCBIRnor5.0
RGSC_v3.4113,114,585 - 3,115,336UniSTSRGSC3.4
RGSC_v3.4824,987,470 - 24,988,214UniSTSRGSC3.4
Celera825,351,214 - 25,351,958UniSTS
Celera113,426,843 - 3,427,594UniSTS
Cytogenetic Map8q13UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence


Ensembl Acc Id: ENSRNOT00000008838   ⟹   ENSRNOP00000008839
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl823,719,896 - 23,780,958 (+)Ensembl
Rnor_6.0 Ensembl826,413,358 - 26,475,588 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000063967   ⟹   ENSRNOP00000059464
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl823,716,030 - 23,783,243 (+)Ensembl
Rnor_6.0 Ensembl826,413,233 - 26,476,611 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000081574   ⟹   ENSRNOP00000071177
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl823,739,737 - 23,780,958 (+)Ensembl
Rnor_6.0 Ensembl826,432,514 - 26,475,588 (+)Ensembl
RefSeq Acc Id: NM_001113740   ⟹   NP_001107212
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8831,995,598 - 32,059,069 (+)NCBI
mRatBN7.2823,719,771 - 23,783,243 (+)NCBI
Rnor_6.0826,413,233 - 26,476,611 (+)NCBI
Rnor_5.0826,434,684 - 26,498,715 (+)NCBI
RGSC_v3.4824,924,747 - 24,988,221 (+)RGD
Celera825,288,734 - 25,351,965 (+)RGD
Sequence:
RefSeq Acc Id: NM_022616   ⟹   NP_072138
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8831,995,598 - 32,059,069 (+)NCBI
mRatBN7.2823,719,771 - 23,783,243 (+)NCBI
Rnor_6.0826,413,233 - 26,476,611 (+)NCBI
Rnor_5.0826,434,684 - 26,498,715 (+)NCBI
RGSC_v3.4824,924,747 - 24,988,221 (+)RGD
Celera825,288,734 - 25,351,965 (+)RGD
Sequence:
RefSeq Acc Id: XM_039082087   ⟹   XP_038938015
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8831,996,207 - 32,059,069 (+)NCBI
mRatBN7.2823,720,207 - 23,783,247 (+)NCBI
RefSeq Acc Id: XM_039082088   ⟹   XP_038938016
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8832,016,514 - 32,059,069 (+)NCBI
mRatBN7.2823,720,259 - 23,783,247 (+)NCBI
RefSeq Acc Id: XM_063266076   ⟹   XP_063122146
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8831,995,597 - 32,059,069 (+)NCBI
RefSeq Acc Id: XM_063266077   ⟹   XP_063122147
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8832,015,309 - 32,059,069 (+)NCBI
RefSeq Acc Id: NP_072138   ⟸   NM_022616
- Peptide Label: isoform a
- UniProtKB: Q9WVC0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001107212   ⟸   NM_001113740
- Peptide Label: isoform b
- UniProtKB: Q9WVC0 (UniProtKB/Swiss-Prot),   A2VCW8 (UniProtKB/TrEMBL),   D4A0F5 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000008839   ⟸   ENSRNOT00000008838
Ensembl Acc Id: ENSRNOP00000059464   ⟸   ENSRNOT00000063967
Ensembl Acc Id: ENSRNOP00000071177   ⟸   ENSRNOT00000081574
RefSeq Acc Id: XP_038938015   ⟸   XM_039082087
- Peptide Label: isoform X1
- UniProtKB: A6JYB9 (UniProtKB/TrEMBL),   A6JYB8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038938016   ⟸   XM_039082088
- Peptide Label: isoform X2
RefSeq Acc Id: XP_063122146   ⟸   XM_063266076
- Peptide Label: isoform X1
- UniProtKB: A6JYB9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063122147   ⟸   XM_063266077
- Peptide Label: isoform X1
- UniProtKB: A6JYB9 (UniProtKB/TrEMBL)
Protein Domains
Septin-type G

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9WVC0-F1-model_v2 AlphaFold Q9WVC0 1-436 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13695826
Promoter ID:EPDNEW_R6339
Type:multiple initiation site
Name:Sept7_1
Description:septin 7
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0826,413,367 - 26,413,427EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:620469 AgrOrtholog
BioCyc Gene G2FUF-31325 BioCyc
Ensembl Genes ENSRNOG00000006545 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000008838.8 UniProtKB/TrEMBL
  ENSRNOT00000063967.4 UniProtKB/TrEMBL
  ENSRNOT00000081574.2 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.300 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7381331 IMAGE-MGC_LOAD
InterPro G_SEPTIN_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Septin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Septin7 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:64551 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGC_CLONE MGC:156646 IMAGE-MGC_LOAD
NCBI Gene 64551 ENTREZGENE
PANTHER SEPTIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SEPTIN UniProtKB/TrEMBL
  SEPTIN-7 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Septin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Septin7 PhenoGen
PIRSF Septin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PRINTS SEPTIN7 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE G_SEPTIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000006545 RatGTEx
Superfamily-SCOP SSF52540 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0G2JZT5_RAT UniProtKB/TrEMBL
  A2VCW8 ENTREZGENE, UniProtKB/TrEMBL
  A6JYB8 ENTREZGENE, UniProtKB/TrEMBL
  A6JYB9 ENTREZGENE, UniProtKB/TrEMBL
  D4A0F5 ENTREZGENE
  F1LMC7_RAT UniProtKB/TrEMBL
  Q9WVC0 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary D4A0F5 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-08-05 Septin7  septin 7  Sept7  septin 7  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-01-20 Sept7  septin 7  Cdc10  CDC10 (cell division cycle 10, S.cerevisiae, homolog)  Symbol and Name updated 1299863 APPROVED
2002-08-07 Cdc10  CDC10 (cell division cycle 10, S.cerevisiae, homolog)      Symbol and Name status set to provisional 70820 PROVISIONAL