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Imported Disease Annotations - CTDObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Fgf12 | Rat | Hepatomegaly | | ISO | FGF12 (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:28108177 | |
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Imported Disease Annotations - CTDObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Fgf12 | Rat | Hepatomegaly | | ISO | FGF12 (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:28108177 | |
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# | Reference Title | Reference Citation |
1. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
2. | Fibroblast growth factor homologous factor 1B binds to the C terminus of the tetrodotoxin-resistant sodium channel rNav1.9a (NaN). | Liu Cj, etal., J Biol Chem 2001 Jun 1;276(22):18925-33. |
3. | Modulation of the cardiac sodium channel Nav1.5 by fibroblast growth factor homologous factor 1B. | Liu CJ, etal., J Biol Chem. 2003 Jan 10;278(2):1029-36. Epub 2002 Oct 24. |
4. | Electronic Transfer of LocusLink and RefSeq Data | NCBI rat LocusLink and RefSeq merged data July 26, 2002 |
5. | Fibroblast growth factor (FGF) homologous factors share structural but not functional homology with FGFs. | Olsen SK, etal., J Biol Chem 2003 Sep 5;278(36):34226-36. Epub 2003 Jun 17. |
6. | KEGG Annotation Import Pipeline | Pipeline to import KEGG annotations from KEGG into RGD |
7. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
8. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
9. | Comprehensive gene review and curation | RGD comprehensive gene curation |
PMID:8790420 | PMID:17678857 | PMID:25724910 | PMID:27164707 | PMID:27470512 | PMID:35093630 |
Fgf12 (Rattus norvegicus - Norway rat) |
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FGF12 (Homo sapiens - human) |
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Fgf12 (Mus musculus - house mouse) |
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Fgf12 (Chinchilla lanigera - long-tailed chinchilla) |
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FGF12 (Pan paniscus - bonobo/pygmy chimpanzee) |
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FGF12 (Canis lupus familiaris - dog) |
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Fgf12 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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FGF12 (Sus scrofa - pig) |
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FGF12 (Chlorocebus sabaeus - green monkey) |
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Fgf12 (Heterocephalus glaber - naked mole-rat) |
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Variants in Fgf12
4593 total Variants ![]() |
The detailed report is available here: | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer |
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
D11Mco1 |
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D11Arb13 |
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D11Got112 |
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RH142893 |
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BF397888 |
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RH140156 |
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RH140530 |
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alimentary part of gastrointestinal system
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appendage
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circulatory system
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ectoderm
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endocrine system
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endoderm
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exocrine system
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hemolymphoid system
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hepatobiliary system
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integumental system
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mesenchyme
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mesoderm
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nervous system
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renal system
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reproductive system
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respiratory system
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9 | 11 | 49 | 113 | 91 | 90 | 59 | 25 | 59 | 6 | 218 | 97 | 93 | 45 | 60 | 31 |
RefSeq Transcripts | NM_001395084 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
NM_130814 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017597854 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AB079374 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
AF348446 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH473999 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JAXUCZ010000011 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
LR130370 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
Ensembl Acc Id: | ENSRNOT00000002650 ⟹ ENSRNOP00000002650 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Ensembl Acc Id: | ENSRNOT00000071586 ⟹ ENSRNOP00000066842 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Ensembl Acc Id: | ENSRNOT00000112688 ⟹ ENSRNOP00000085066 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | NM_001395084 ⟹ NP_001382013 | ||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | NM_130814 ⟹ NP_570827 | ||||||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_017597854 ⟹ XP_017453343 | ||||||||||||||||
Type: | CODING | ||||||||||||||||
Position: |
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Sequence: |
Protein RefSeqs | NP_001382013 | (Get FASTA) | NCBI Sequence Viewer |
NP_570827 | (Get FASTA) | NCBI Sequence Viewer | |
XP_017453343 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAK59870 | (Get FASTA) | NCBI Sequence Viewer |
BAB84568 | (Get FASTA) | NCBI Sequence Viewer | |
EDL78130 | (Get FASTA) | NCBI Sequence Viewer | |
EDL78131 | (Get FASTA) | NCBI Sequence Viewer | |
EDL78132 | (Get FASTA) | NCBI Sequence Viewer | |
EDL78133 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSRNOP00000002650.2 | ||
ENSRNOP00000066842.2 | |||
ENSRNOP00000085066.1 | |||
GenBank Protein | P61150 | (Get FASTA) | NCBI Sequence Viewer |
VDK10950 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_570827 ⟸ NM_130814 |
- Peptide Label: | isoform 1 |
- UniProtKB: | P61150 (UniProtKB/Swiss-Prot), A0A7U3L6G2 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_017453343 ⟸ XM_017597854 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A8I6A2F9 (UniProtKB/TrEMBL), A6JRX6 (UniProtKB/TrEMBL) |
- Sequence: |
Ensembl Acc Id: | ENSRNOP00000002650 ⟸ ENSRNOT00000002650 |
Ensembl Acc Id: | ENSRNOP00000066842 ⟸ ENSRNOT00000071586 |
Ensembl Acc Id: | ENSRNOP00000085066 ⟸ ENSRNOT00000112688 |
RefSeq Acc Id: | NP_001382013 ⟸ NM_001395084 |
- Peptide Label: | isoform 2 |
- UniProtKB: | A6JRX5 (UniProtKB/TrEMBL), A6JRX6 (UniProtKB/TrEMBL) |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-P61150-F1-model_v2 | AlphaFold | P61150 | 1-243 | view protein structure |
eQTL | View at Phenogen | |
WGCNA | View at Phenogen | |
Tissue/Strain Expression | View at Phenogen |
Database | Acc Id | Source(s) |
AGR Gene | RGD:620163 | AgrOrtholog |
BioCyc Gene | G2FUF-20959 | BioCyc |
Ensembl Genes | ENSRNOG00000001931 | Ensembl, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Ensembl Transcript | ENSRNOT00000002650.5 | UniProtKB/Swiss-Prot |
ENSRNOT00000071586.3 | UniProtKB/TrEMBL | |
ENSRNOT00000112688.1 | UniProtKB/TrEMBL | |
Gene3D-CATH | 2.80.10.50 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
InterPro | Fibroblast_GF_fam | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
IL1/FGF | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
KEGG Report | rno:170630 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
NCBI Gene | 170630 | ENTREZGENE |
PANTHER | PTHR11486 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Pfam | FGF | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PhenoGen | Fgf12 | PhenoGen |
PRINTS | HBGFFGF | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
IL1HBGF | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
PROSITE | HBGF_FGF | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
RatGTEx | ENSRNOG00000001931 | RatGTEx |
ENSRNOG00055004637 | RatGTEx | |
ENSRNOG00060024257 | RatGTEx | |
ENSRNOG00065003574 | RatGTEx | |
SMART | FGF | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Superfamily-SCOP | SSF50353 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
UniProt | A0A7U3L6G2 | ENTREZGENE, UniProtKB/TrEMBL |
A0A8I6A2F9 | ENTREZGENE, UniProtKB/TrEMBL | |
A6JRX4_RAT | UniProtKB/TrEMBL | |
A6JRX5 | ENTREZGENE, UniProtKB/TrEMBL | |
A6JRX6 | ENTREZGENE, UniProtKB/TrEMBL | |
FGF12_RAT | UniProtKB/Swiss-Prot | |
M0RBB2_RAT | UniProtKB/TrEMBL | |
P61150 | ENTREZGENE | |
UniProt Secondary | O35339 | UniProtKB/Swiss-Prot |
P70376 | UniProtKB/Swiss-Prot | |
Q924B4 | UniProtKB/Swiss-Prot | |
Q92912 | UniProtKB/Swiss-Prot | |
Q93001 | UniProtKB/Swiss-Prot |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
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2002-08-06 | Fgf12 | fibroblast growth factor 12 | Symbol and Name status set to provisional | 70820 | PROVISIONAL |
Note Type | Note | Reference |
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gene_physical_interaction | binds to the C terminus of the tetrodotoxin-resistant sodium channel rNav1.9a (NaN) | 632803 |
gene_product | member of the fibroblast growth factor family | 632803 |