Ank3 (ankyrin 3) - Rat Genome Database

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Gene: Ank3 (ankyrin 3) Rattus norvegicus
Analyze
Symbol: Ank3
Name: ankyrin 3
RGD ID: 620157
Description: Enables several functions, including cadherin binding activity; spectrin binding activity; and transmembrane transporter binding activity. Involved in several processes, including neuron development; positive regulation of cell communication; and regulation of monoatomic ion transport. Located in several cellular components, including main axon; myofibril; and spectrin-associated cytoskeleton. Is active in glutamatergic synapse and postsynapse. Biomarker of status epilepticus. Human ortholog(s) of this gene implicated in autosomal recessive intellectual developmental disorder 37; bipolar disorder; and schizophrenia. Orthologous to human ANK3 (ankyrin 3); INTERACTS WITH (+)-pilocarpine; 2,2',5,5'-tetrachlorobiphenyl; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: ANK-3; ankyrin 3 (G); ankyrin 3, epithelial; ankyrin 3, epithelial isoform g; ankyrin 3, node of Ranvier; ankyrin 3, node of Ranvier (ankyrin G); ankyrin-3; ankyrin-G
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82018,601,307 - 19,224,790 (-)NCBIGRCr8
mRatBN7.22018,602,267 - 19,225,831 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2018,602,786 - 19,086,300 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2019,329,523 - 19,814,751 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02018,684,223 - 19,167,453 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02019,157,090 - 19,642,620 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02019,948,767 - 20,480,628 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2020,105,047 - 20,480,623 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02022,087,201 - 22,609,939 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42019,328,684 - 19,828,196 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12019,342,749 - 19,991,423 (-)NCBI
Celera2019,989,307 - 20,463,938 (-)NCBICelera
Cytogenetic Map20p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-pilocarpine  (EXP)
(1->4)-beta-D-glucan  (ISO)
1,1-dichloroethene  (ISO)
1,2-dimethylhydrazine  (ISO)
14-Deoxy-11,12-didehydroandrographolide  (ISO)
17beta-estradiol  (ISO)
2,2',5,5'-tetrachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
2,6-dinitrotoluene  (EXP)
2-palmitoylglycerol  (ISO)
3,4-methylenedioxymethamphetamine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
6-propyl-2-thiouracil  (EXP)
8'-apo-beta,psi-caroten-8'-al  (ISO)
acetamide  (EXP)
afimoxifene  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
alpha-Zearalanol  (EXP)
amitrole  (EXP)
ammonium chloride  (EXP)
amphotericin B  (ISO)
arsenous acid  (ISO)
atrazine  (EXP)
benzo[a]pyrene  (ISO)
benzo[b]fluoranthene  (ISO)
beta-carotene  (ISO)
bexarotene  (EXP)
bisphenol A  (EXP,ISO)
Brodifacoum  (EXP)
buta-1,3-diene  (ISO)
butanal  (ISO)
cadmium dichloride  (ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
chlorpyrifos  (EXP)
chrysene  (ISO)
cisplatin  (ISO)
clofibrate  (ISO)
clothianidin  (ISO)
cobalt dichloride  (EXP)
Cuprizon  (EXP)
cyclosporin A  (ISO)
DDT  (EXP)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
dioxygen  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
elemental selenium  (ISO)
entinostat  (ISO)
epoxiconazole  (ISO)
ethanol  (ISO)
folic acid  (ISO)
fulvestrant  (ISO)
furan  (EXP)
gemcitabine  (ISO)
lead(0)  (ISO)
lipopolysaccharide  (ISO)
menadione  (ISO)
methoxychlor  (EXP)
methylmercury chloride  (ISO)
methylseleninic acid  (ISO)
mono(2-ethylhexyl) phthalate  (ISO)
nickel atom  (ISO)
niclosamide  (ISO)
paracetamol  (ISO)
PCB138  (EXP)
PD 0325901  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (EXP,ISO)
phenobarbital  (EXP,ISO)
phenylmercury acetate  (ISO)
pirinixic acid  (ISO)
progesterone  (ISO)
raloxifene  (EXP)
razoxane  (EXP)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
selenium atom  (ISO)
silicon dioxide  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sodium fluoride  (ISO)
sotorasib  (ISO)
succimer  (ISO)
testosterone enanthate  (ISO)
tetrachloromethane  (ISO)
tetraphene  (ISO)
thapsigargin  (EXP)
titanium dioxide  (ISO)
torcetrapib  (ISO)
trametinib  (ISO)
trichloroethene  (EXP)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
triptonide  (ISO)
valproic acid  (EXP,ISO)
vinclozolin  (EXP)
vitamin E  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
anterograde axonal transport  (IMP)
axon development  (IMP)
axon guidance  (ISO)
axonogenesis  (ISO)
cellular response to magnesium ion  (ISO,ISS)
clustering of voltage-gated sodium channels  (IMP)
cytoskeleton organization  (IEA)
establishment of protein localization  (ISO)
establishment or maintenance of microtubule cytoskeleton polarity  (IMP)
Golgi to plasma membrane protein transport  (IEA,ISO)
magnesium ion homeostasis  (ISO,ISS)
maintenance of protein location in cell  (IMP)
maintenance of protein location in plasma membrane  (IEA,ISO)
membrane assembly  (IEA,IGI,ISO)
mitotic cytokinesis  (IEA,ISO)
negative regulation of delayed rectifier potassium channel activity  (ISO,ISS)
negative regulation of endocytosis  (IMP)
neuromuscular junction development  (IEP)
neuronal action potential  (ISO)
plasma membrane organization  (IEA,ISO)
positive regulation of cation channel activity  (IMP)
positive regulation of cell communication by electrical coupling  (IMP)
positive regulation of gene expression  (IMP)
positive regulation of homotypic cell-cell adhesion  (IMP)
positive regulation of membrane depolarization during cardiac muscle cell action potential  (IMP)
positive regulation of membrane potential  (IMP)
positive regulation of non-canonical NF-kappaB signal transduction  (IMP)
positive regulation of protein targeting to membrane  (IMP)
positive regulation of sodium ion import across plasma membrane  (IMP)
positive regulation of sodium ion transmembrane transporter activity  (IMP)
positive regulation of sodium ion transport  (IMP)
protein localization to axon  (IMP,ISO)
protein localization to plasma membrane  (IBA,IGI,IMP,ISO)
regulation of modification of postsynaptic structure  (IDA,IMP)
regulation of potassium ion transport  (IDA)
regulation of protein targeting  (IMP)
regulation of transcription by RNA polymerase II  (IBA)
response to immobilization stress  (IEP)
signal transduction  (IEA)
synapse organization  (ISO)

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. Voltage-gated sodium channels and ankyrinG occupy a different postsynaptic domain from acetylcholine receptors from an early stage of neuromuscular junction maturation in rats. Bailey SJ, etal., J Neurosci. 2003 Mar 15;23(6):2102-11.
2. Expression of sodium channel SNS/PN3 and ankyrin(G) mRNAs in the trigeminal ganglion after inferior alveolar nerve injury in the rat. Bongenhielm U, etal., Exp Neurol. 2000 Aug;164(2):384-95.
3. Interaction of the Nav1.2a subunit of the voltage-dependent sodium channel with nodal ankyrinG. In vitro mapping of the interacting domains and association in synaptosomes. Bouzidi M, etal., J Biol Chem 2002 Aug 9;277(32):28996-9004.
4. Long-term increasing co-localization of SCN8A and ankyrin-G in rat hippocampal cornu ammonis 1 after pilocarpine induced status epilepticus. Chen Z, etal., Brain Res. 2009 May 13;1270:112-20. Epub 2009 Mar 21.
5. Bioinformatics approach to predict target genes for dysregulated microRNAs in hepatocellular carcinoma: study on a chemically-induced HCC mouse model. Del Vecchio F, etal., BMC Bioinformatics. 2015 Dec 10;16:408. doi: 10.1186/s12859-015-0836-1.
6. Kv3.1b is a novel component of CNS nodes. Devaux J, etal., J Neurosci. 2003 Jun 1;23(11):4509-18.
7. Nodes of Ranvier and axon initial segments are ankyrin G-dependent domains that assemble by distinct mechanisms. Dzhashiashvili Y, etal., J Cell Biol. 2007 Jun 4;177(5):857-70.
8. Cooperative Interactions between 480 kDa Ankyrin-G and EB Proteins Assemble the Axon Initial Segment. Freal A, etal., J Neurosci. 2016 Apr 20;36(16):4421-33. doi: 10.1523/JNEUROSCI.3219-15.2016.
9. Feedback-Driven Assembly of the Axon Initial Segment. Fréal A, etal., Neuron. 2019 Oct 23;104(2):305-321.e8. doi: 10.1016/j.neuron.2019.07.029. Epub 2019 Aug 29.
10. Identification of Ank(G107), a muscle-specific ankyrin-G isoform. Gagelin C, etal., J Biol Chem 2002 Apr 12;277(15):12978-87.
11. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
12. Ordered assembly of the adhesive and electrochemical connections within newly formed intercalated disks in primary cultures of adult rat cardiomyocytes. Geisler SB, etal., J Biomed Biotechnol. 2010;2010:624719. Epub 2010 May 12.
13. MAP2 Defines a Pre-axonal Filtering Zone to Regulate KIF1- versus KIF5-Dependent Cargo Transport in Sensory Neurons. Gumy LF, etal., Neuron. 2017 Apr 19;94(2):347-362.e7. doi: 10.1016/j.neuron.2017.03.046.
14. Neurofascin assembles a specialized extracellular matrix at the axon initial segment. Hedstrom KL, etal., J Cell Biol. 2007 Aug 27;178(5):875-86. doi: 10.1083/jcb.200705119. Epub 2007 Aug 20.
15. Ankyrin-G in skeletal muscle: tissue-specific alternative splicing contributes to the complexity of the sarcolemmal cytoskeleton. Hopitzan AA, etal., Exp Cell Res. 2005 Sep 10;309(1):86-98. doi: 10.1016/j.yexcr.2005.04.013.
16. Ankyrin-G coordinates assembly of the spectrin-based membrane skeleton, voltage-gated sodium channels, and L1 CAMs at Purkinje neuron initial segments. Jenkins SM and Bennett V, J Cell Biol. 2001 Nov 26;155(5):739-46. Epub 2001 Nov 26.
17. Epigenome-Wide DNA Methylation Profiling of Normal Mucosa Reveals HLA-F Hypermethylation as a Biomarker Candidate for Serrated Polyposis Syndrome. Jung G, etal., J Mol Diagn. 2022 Jun;24(6):674-686. doi: 10.1016/j.jmoldx.2022.03.010. Epub 2022 Apr 18.
18. Lateral membrane biogenesis in human bronchial epithelial cells requires 190-kDa ankyrin-G. Kizhatil K and Bennett V, J Biol Chem. 2004 Apr 16;279(16):16706-14. Epub 2004 Feb 1.
19. Ankyrin-G is a molecular partner of E-cadherin in epithelial cells and early embryos. Kizhatil K, etal., J Biol Chem. 2007 Sep 7;282(36):26552-61. Epub 2007 Jul 9.
20. AnkyrinG is associated with the postsynaptic membrane and the sarcoplasmic reticulum in the skeletal muscle fiber. Kordeli E, etal., J Cell Sci 1998 Aug;111 ( Pt 15):2197-207.
21. Sodium channel cluster, betaIV-spectrin and ankyrinG positive "hot spots" on dendritic segments of parvalbumin-containing neurons and some other neurons in the mouse and rat main olfactory bulbs. Kosaka T, etal., Neurosci Res. 2008 Nov;62(3):176-86. Epub 2008 Aug 22.
22. A constitutively-active IKK-complex at the axon initial segment. König HG, etal., Brain Res. 2018 Jan 1;1678:356-366. doi: 10.1016/j.brainres.2017.10.020. Epub 2017 Oct 24.
23. End-binding proteins EB3 and EB1 link microtubules to ankyrin G in the axon initial segment. Leterrier C, etal., Proc Natl Acad Sci U S A. 2011 May 24;108(21):8826-31. Epub 2011 May 6.
24. Voltage-gated Nav channel targeting in the heart requires an ankyrin-G dependent cellular pathway. Lowe JS, etal., J Cell Biol. 2008 Jan 14;180(1):173-86. Epub 2008 Jan 7.
25. Ankyrin-3 as a molecular marker of early-life stress and vulnerability to psychiatric disorders. Luoni A, etal., Transl Psychiatry. 2016 Nov 8;6(11):e943. doi: 10.1038/tp.2016.211.
26. Novel interactions of ankyrins-G at the costameres: the muscle-specific Obscurin/Titin-Binding-related Domain (OTBD) binds plectin and filamin C. Maiweilidan Y, etal., Exp Cell Res. 2011 Apr 1;317(6):724-36. doi: 10.1016/j.yexcr.2011.01.002. Epub 2011 Jan 9.
27. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
28. Nav1.5 E1053K mutation causing Brugada syndrome blocks binding to ankyrin-G and expression of Nav1.5 on the surface of cardiomyocytes. Mohler PJ, etal., Proc Natl Acad Sci U S A. 2004 Dec 14;101(50):17533-8. Epub 2004 Dec 3.
29. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
30. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
31. A common ankyrin-G-based mechanism retains KCNQ and NaV channels at electrically active domains of the axon. Pan Z, etal., J Neurosci. 2006 Mar 8;26(10):2599-613.
32. CK2-regulated schwannomin-interacting protein IQCJ-SCHIP-1 association with AnkG contributes to the maintenance of the axon initial segment. Papandréou MJ, etal., J Neurochem. 2015 Aug;134(3):527-37. doi: 10.1111/jnc.13158. Epub 2015 Jun 22.
33. Proteolysis of submembrane cytoskeletal proteins ankyrin-G and alphaII-spectrin following diffuse brain injury: a role in white matter vulnerability at Nodes of Ranvier. Reeves TM, etal., Brain Pathol. 2010 Nov;20(6):1055-68. doi: 10.1111/j.1750-3639.2010.00412.x. Epub 2010 Jun 15.
34. GOA pipeline RGD automated data pipeline
35. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
36. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
37. Molecular and genetic evidence for abnormalities in the nodes of Ranvier in schizophrenia. Roussos P, etal., Arch Gen Psychiatry. 2012 Jan;69(1):7-15. doi: 10.1001/archgenpsychiatry.2011.110. Epub 2011 Sep 5.
38. Interactions between ankyrin-G, Plakophilin-2, and Connexin43 at the cardiac intercalated disc. Sato PY, etal., Circ Res. 2011 Jul 8;109(2):193-201. Epub 2011 May 26.
39. Psychiatric risk factor ANK3/ankyrin-G nanodomains regulate the structure and function of glutamatergic synapses. Smith KR, etal., Neuron. 2014 Oct 22;84(2):399-415. doi: 10.1016/j.neuron.2014.10.010. Epub 2014 Oct 22.
40. Identification of a novel ankyrin isoform (AnkG190) in kidney and lung that associates with the plasma membrane and binds alpha-Na, K-ATPase. Thevananther S, etal., J Biol Chem 1998 Sep 11;273(37):23952-8.
41. A linkage and exome study of multiplex families with bipolar disorder implicates rare coding variants of ANK3 and additional rare alleles at 10q11-q21. Toma C, etal., J Psychiatry Neurosci. 2021 Mar 17;46(2):E247-E257. doi: 10.1503/jpn.200083.
42. Na,K-ATPase in skeletal muscle: two populations of beta-spectrin control localization in the sarcolemma but not partitioning between the sarcolemma and the transverse tubules. Williams MW, etal., J Cell Sci. 2001 Feb;114(Pt 4):751-62. doi: 10.1242/jcs.114.4.751.
43. The axon-dendrite targeting of Kv3 (Shaw) channels is determined by a targeting motif that associates with the T1 domain and ankyrin G. Xu M, etal., J Neurosci. 2007 Dec 19;27(51):14158-70. doi: 10.1523/JNEUROSCI.3675-07.2007.
44. Restriction of 480/270-kD ankyrin G to axon proximal segments requires multiple ankyrin G-specific domains. Zhang X and Bennett V, J Cell Biol 1998 Sep 21;142(6):1571-81.
Additional References at PubMed
PMID:7615634   PMID:9832557   PMID:10995443   PMID:11222639   PMID:12477932   PMID:14593108   PMID:15479642   PMID:15611082   PMID:15797713   PMID:17234591   PMID:17311847   PMID:19064667  
PMID:20188654   PMID:20877009   PMID:22623668   PMID:22871113   PMID:23903368   PMID:25383926   PMID:25552556   PMID:25874799   PMID:26187182   PMID:26671463   PMID:27046665   PMID:27356871  
PMID:28841137   PMID:29476059   PMID:29956586   PMID:31934859   PMID:32357304  


Genomics

Comparative Map Data
Ank3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82018,601,307 - 19,224,790 (-)NCBIGRCr8
mRatBN7.22018,602,267 - 19,225,831 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2018,602,786 - 19,086,300 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2019,329,523 - 19,814,751 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02018,684,223 - 19,167,453 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02019,157,090 - 19,642,620 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02019,948,767 - 20,480,628 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2020,105,047 - 20,480,623 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02022,087,201 - 22,609,939 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42019,328,684 - 19,828,196 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12019,342,749 - 19,991,423 (-)NCBI
Celera2019,989,307 - 20,463,938 (-)NCBICelera
Cytogenetic Map20p11NCBI
ANK3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381060,026,298 - 60,733,528 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1060,026,298 - 60,733,490 (-)EnsemblGRCh38hg38GRCh38
GRCh371061,786,056 - 62,493,286 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361061,458,165 - 61,819,494 (-)NCBINCBI36Build 36hg18NCBI36
Build 341061,458,164 - 61,819,494NCBI
Celera1055,053,717 - 55,415,045 (-)NCBICelera
Cytogenetic Map10q21.2NCBI
HuRef1055,773,261 - 56,482,641 (-)NCBIHuRef
CHM1_11062,067,860 - 62,775,531 (-)NCBICHM1_1
T2T-CHM13v2.01060,881,045 - 61,590,258 (-)NCBIT2T-CHM13v2.0
Ank3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391069,234,608 - 69,863,266 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1069,234,603 - 69,863,268 (+)EnsemblGRCm39 Ensembl
GRCm381069,533,486 - 70,027,436 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1069,398,773 - 70,027,438 (+)EnsemblGRCm38mm10GRCm38
MGSCv371068,996,456 - 69,490,184 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361068,929,206 - 69,420,423 (+)NCBIMGSCv36mm8
Celera1070,624,257 - 71,118,490 (+)NCBICelera
Cytogenetic Map10B5.3NCBI
cM Map1036.1NCBI
Ank3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495542513,522,233 - 13,851,286 (-)NCBIChiLan1.0ChiLan1.0
ANK3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2872,238,291 - 72,947,816 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11072,243,612 - 72,953,138 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01056,560,589 - 57,269,952 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11058,774,451 - 59,136,990 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1058,790,696 - 59,602,954 (-)Ensemblpanpan1.1panPan2
ANK3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1412,166,275 - 12,827,175 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl412,167,550 - 12,827,037 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha412,363,980 - 13,033,138 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0412,429,077 - 13,092,708 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl412,429,546 - 13,092,821 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1412,405,705 - 12,731,679 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0412,524,697 - 13,188,432 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0412,836,070 - 13,499,460 (-)NCBIUU_Cfam_GSD_1.0
Ank3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721368,578,618 - 68,890,049 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049366142,664,594 - 2,976,174 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANK3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1463,416,161 - 64,194,128 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11463,416,154 - 63,809,220 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21468,392,391 - 68,782,101 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ANK3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1970,549,665 - 71,253,928 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl970,893,260 - 71,254,245 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604831,446,144 - 32,148,885 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ank3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247913,299,287 - 3,633,631 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ank3
4375 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:232
Count of miRNA genes:175
Interacting mature miRNAs:197
Transcripts:ENSRNOT00000031134, ENSRNOT00000043215
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4889610Pancm3Pancreatic morphology QTL 33.750.001pancreas mass (VT:0010144)pancreas wet weight (CMO:0000626)201761783247606836Rat
1641915Colcr9Colorectal carcinoma resistance QTL 92.970.0024intestine integrity trait (VT:0010554)benign colorectal tumor number (CMO:0001795)20153065546530655Rat
2317057Aia27Adjuvant induced arthritis QTL 272.83joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)20289259726381954Rat
7387283Uae44Urinary albumin excretion QTL 440.1712urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)20126123605Rat
4889870Pur30Proteinuria QTL 30190.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)20804241029322208Rat
7411668Foco32Food consumption QTL 3280.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)20136600972Rat
2305926Iddm37Insulin dependent diabetes mellitus QTL 376blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)20152784246527842Rat
1354642Despr15Despair related QTL 150.0027locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)20124159021Rat
1600382Edcs3Endometrial carcinoma susceptibility QTL33.50.003uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)20125159026Rat
8694189Bw153Body weight QTL 1533.130.001body mass (VT:0001259)body weight gain (CMO:0000420)20129191651Rat
2303626Vencon10Ventilatory control QTL 100.001respiration trait (VT:0001943)respiration rate (CMO:0000289)201919072154435887Rat
9590109Sffal8Serum free fatty acids level QTL 85.320.01blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)20129191651Rat
9590275Scort15Serum corticosterone level QTL 153.480.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)20129191651Rat
9589155Insul32Insulin level QTL 326.380.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)20129191651Rat
7411650Foco23Food consumption QTL 2320.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)20129191651Rat
7411652Foco24Food consumption QTL 240.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)201175751554435887Rat
2317851Alcrsp22Alcohol response QTL 223.20.05response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)20127339237Rat
1598816Memor12Memory QTL 122.4exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)20260683647606836Rat
2317880Alcrsp25Alcohol response QTL 252.3response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)201769755054435887Rat
1641893Alcrsp7Alcohol response QTL 7response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)20127339237Rat
6893685Bw111Body weight QTL 1112.70.004body mass (VT:0001259)body weight (CMO:0000012)20132578807Rat
9590252Scort12Serum corticosterone level QTL 1220.460.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)20136600972Rat
9590092Insglur9Insulin/glucose ratio QTL 918.380.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)201175751554435887Rat

Markers in Region
D20Got27  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22018,662,965 - 18,663,165 (-)MAPPERmRatBN7.2
Rnor_6.02020,421,417 - 20,421,616NCBIRnor6.0
Rnor_5.02022,549,047 - 22,549,246UniSTSRnor5.0
RGSC_v3.42019,400,351 - 19,400,551RGDRGSC3.4
RGSC_v3.42019,400,352 - 19,400,551UniSTSRGSC3.4
RGSC_v3.12019,414,152 - 19,414,351RGD
Celera2020,048,472 - 20,048,671UniSTS
RH 3.4 Map20252.03UniSTS
RH 3.4 Map20252.03RGD
RH 2.0 Map20273.2RGD
Cytogenetic Map20p11UniSTS
RH118335  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22018,930,339 - 18,930,517 (-)MAPPERmRatBN7.2
Rnor_6.02020,104,659 - 20,104,836NCBIRnor6.0
Rnor_5.02022,242,668 - 22,242,845UniSTSRnor5.0
RGSC_v3.42019,662,053 - 19,662,230UniSTSRGSC3.4
Celera2020,310,818 - 20,310,995UniSTS
Cytogenetic Map20p11UniSTS
RH138875  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22018,798,619 - 18,798,774 (-)MAPPERmRatBN7.2
Rnor_6.02020,284,265 - 20,284,419NCBIRnor6.0
Rnor_5.02022,419,395 - 22,419,549UniSTSRnor5.0
RGSC_v3.42019,530,949 - 19,531,103UniSTSRGSC3.4
Celera2020,180,686 - 20,180,840UniSTS
Cytogenetic Map20p11UniSTS
AA892174  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22018,602,401 - 18,602,503 (-)MAPPERmRatBN7.2
Rnor_6.02020,480,906 - 20,481,007NCBIRnor6.0
Rnor_5.02022,610,217 - 22,610,318UniSTSRnor5.0
RGSC_v3.42019,328,305 - 19,328,406UniSTSRGSC3.4
Celera2019,988,928 - 19,989,029UniSTS
Cytogenetic Map20p11UniSTS
Ank3  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22018,658,638 - 18,660,295 (-)MAPPERmRatBN7.2
Rnor_6.02020,424,290 - 20,425,946NCBIRnor6.0
Rnor_5.02022,551,832 - 22,553,488UniSTSRnor5.0
RGSC_v3.42019,394,897 - 19,396,553UniSTSRGSC3.4
Celera2020,044,137 - 20,045,793UniSTS
Cytogenetic Map20p11UniSTS
RH131586  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22018,711,957 - 18,712,352 (-)MAPPERmRatBN7.2
Rnor_6.02020,372,236 - 20,372,630NCBIRnor6.0
Rnor_5.02022,501,458 - 22,501,852UniSTSRnor5.0
RGSC_v3.42019,451,789 - 19,452,183UniSTSRGSC3.4
Celera2020,096,992 - 20,097,386UniSTS
Cytogenetic Map20p11UniSTS
RH132141  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22018,707,997 - 18,708,188 (-)MAPPERmRatBN7.2
Rnor_6.02020,376,401 - 20,376,591NCBIRnor6.0
Rnor_5.02022,505,623 - 22,505,813UniSTSRnor5.0
RGSC_v3.42019,447,827 - 19,448,017UniSTSRGSC3.4
Celera2020,093,032 - 20,093,222UniSTS
Cytogenetic Map20p11UniSTS
RH133987  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22018,602,979 - 18,603,199 (-)MAPPERmRatBN7.2
Rnor_6.02020,480,210 - 20,480,429NCBIRnor6.0
Rnor_5.02022,609,521 - 22,609,740UniSTSRnor5.0
RGSC_v3.42019,328,883 - 19,329,102UniSTSRGSC3.4
Celera2019,989,506 - 19,989,725UniSTS
RH 3.4 Map20252.07UniSTS
Cytogenetic Map20p11UniSTS
BE103415  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22018,652,078 - 18,652,247 (-)MAPPERmRatBN7.2
Rnor_6.02020,432,336 - 20,432,504NCBIRnor6.0
Rnor_5.02022,559,878 - 22,560,046UniSTSRnor5.0
RGSC_v3.42019,378,239 - 19,378,407UniSTSRGSC3.4
Celera2020,037,591 - 20,037,759UniSTS
RH 3.4 Map20255.09UniSTS
Cytogenetic Map20p11UniSTS
BF405621  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22018,700,057 - 18,700,221 (-)MAPPERmRatBN7.2
Rnor_6.02020,384,371 - 20,384,534NCBIRnor6.0
Rnor_5.02022,513,315 - 22,513,478UniSTSRnor5.0
RGSC_v3.42019,439,104 - 19,439,267UniSTSRGSC3.4
Celera2020,085,394 - 20,085,557UniSTS
RH 3.4 Map20229.29UniSTS
Cytogenetic Map20p11UniSTS
BE116351  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22018,639,632 - 18,639,782 (-)MAPPERmRatBN7.2
Rnor_6.02020,445,011 - 20,445,160NCBIRnor6.0
Rnor_5.02022,572,553 - 22,572,702UniSTSRnor5.0
RGSC_v3.42019,365,876 - 19,366,025UniSTSRGSC3.4
Celera2020,025,163 - 20,025,312UniSTS
RH 3.4 Map20252.46UniSTS
Cytogenetic Map20p11UniSTS
AU046827  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22018,837,350 - 18,837,504 (-)MAPPERmRatBN7.2
Rnor_6.02020,245,846 - 20,245,999NCBIRnor6.0
Rnor_5.02022,380,976 - 22,381,129UniSTSRnor5.0
RGSC_v3.42019,569,893 - 19,570,046UniSTSRGSC3.4
Celera2020,219,259 - 20,219,412UniSTS
Cytogenetic Map20p11UniSTS
RH138887  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22019,070,497 - 19,070,730 (-)MAPPERmRatBN7.2
Rnor_6.02019,964,277 - 19,964,509NCBIRnor6.0
Rnor_5.02022,102,711 - 22,102,943UniSTSRnor5.0
RGSC_v3.42019,812,691 - 19,812,923UniSTSRGSC3.4
Celera2020,448,434 - 20,448,666UniSTS
RH 3.4 Map20252.88UniSTS
Cytogenetic Map20p11UniSTS
RH69744  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.02022,252,960 - 22,254,073NCBIRnor5.0
RGSC_v3.42019,650,825 - 19,651,937UniSTSRGSC3.4
Celera2020,299,590 - 20,300,702UniSTS
Cytogenetic Map20p11UniSTS
Ank3  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22018,602,972 - 18,603,095 (-)MAPPERmRatBN7.2
Rnor_6.02020,480,314 - 20,480,436NCBIRnor6.0
Rnor_5.02022,609,625 - 22,609,747UniSTSRnor5.0
RGSC_v3.42019,328,876 - 19,328,998UniSTSRGSC3.4
Celera2019,989,499 - 19,989,621UniSTS
Cytogenetic Map20p11UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001033984 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_031805 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039098834 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039098836 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039098838 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039098839 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039098842 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039098844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039098845 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039098849 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039098850 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039098851 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039098852 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039098853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279250 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279253 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279254 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279255 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279256 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279258 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279264 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279267 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279268 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279269 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279270 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279271 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279272 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279273 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279275 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279276 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279278 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279279 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279281 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279282 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279283 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279285 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF065149 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF065150 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF069525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF102552 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ428573 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ812019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ812020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ812021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ812022 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ812023 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ812024 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ812025 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC101885 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC127456 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473988 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000077620   ⟹   ENSRNOP00000071958
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2018,612,127 - 18,824,445 (-)Ensembl
Rnor_6.0 Ensembl2020,259,263 - 20,455,145 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000079630   ⟹   ENSRNOP00000072180
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2018,602,786 - 19,086,300 (-)Ensembl
Rnor_6.0 Ensembl2020,236,151 - 20,479,685 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000082181   ⟹   ENSRNOP00000071472
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2018,629,466 - 18,824,090 (-)Ensembl
Rnor_6.0 Ensembl2020,105,047 - 20,471,259 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000085985   ⟹   ENSRNOP00000072993
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2018,602,786 - 19,086,300 (-)Ensembl
Rnor_6.0 Ensembl2020,259,254 - 20,480,362 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000090273   ⟹   ENSRNOP00000071942
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2018,602,786 - 19,086,300 (-)Ensembl
Rnor_6.0 Ensembl2020,259,263 - 20,480,623 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000091044   ⟹   ENSRNOP00000069120
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2018,603,458 - 19,086,300 (-)Ensembl
Rnor_6.0 Ensembl2020,378,861 - 20,480,623 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000100191   ⟹   ENSRNOP00000088491
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2018,612,127 - 18,931,604 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000111832   ⟹   ENSRNOP00000088269
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2018,603,458 - 19,086,300 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000116271   ⟹   ENSRNOP00000095836
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2018,603,458 - 19,086,300 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000117152   ⟹   ENSRNOP00000082903
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2018,603,458 - 19,086,300 (-)Ensembl
RefSeq Acc Id: NM_001033984   ⟹   NP_001029156
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,611,167 - 18,929,177 (-)NCBI
mRatBN7.22018,612,127 - 18,930,129 (-)NCBI
Rnor_6.02020,105,047 - 20,471,282 (+)NCBI
Rnor_5.02022,087,201 - 22,609,939 (+)NCBI
RGSC_v3.42019,328,684 - 19,828,196 (-)RGD
Celera2019,998,653 - 20,310,607 (-)NCBI
Sequence:
RefSeq Acc Id: NM_031805   ⟹   NP_113993
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,821 - 19,085,056 (-)NCBI
mRatBN7.22018,602,781 - 19,086,004 (-)NCBI
Rnor_6.02019,948,767 - 20,480,628 (+)NCBI
Rnor_5.02022,087,201 - 22,609,939 (+)NCBI
RGSC_v3.42019,328,684 - 19,828,196 (-)RGD
Celera2019,989,307 - 20,463,938 (-)RGD
Sequence:
RefSeq Acc Id: XM_039098834   ⟹   XP_038954762
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,611,031 - 18,933,235 (-)NCBI
mRatBN7.22018,602,267 - 18,930,129 (-)NCBI
RefSeq Acc Id: XM_039098836   ⟹   XP_038954764
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,933,235 (-)NCBI
mRatBN7.22018,602,267 - 18,930,129 (-)NCBI
RefSeq Acc Id: XM_039098838   ⟹   XP_038954766
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,929,897 (-)NCBI
mRatBN7.22018,602,267 - 18,930,129 (-)NCBI
RefSeq Acc Id: XM_039098839   ⟹   XP_038954767
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,929,880 (-)NCBI
mRatBN7.22018,602,267 - 18,930,129 (-)NCBI
RefSeq Acc Id: XM_039098842   ⟹   XP_038954770
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,929,856 (-)NCBI
mRatBN7.22018,602,267 - 18,930,129 (-)NCBI
RefSeq Acc Id: XM_039098844   ⟹   XP_038954772
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,929,853 (-)NCBI
mRatBN7.22018,602,267 - 18,931,268 (-)NCBI
RefSeq Acc Id: XM_039098845   ⟹   XP_038954773
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,929,850 (-)NCBI
mRatBN7.22018,602,267 - 18,931,266 (-)NCBI
RefSeq Acc Id: XM_039098849   ⟹   XP_038954777
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,929,835 (-)NCBI
mRatBN7.22018,602,267 - 18,931,263 (-)NCBI
RefSeq Acc Id: XM_039098850   ⟹   XP_038954778
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 19,224,790 (-)NCBI
mRatBN7.22018,603,269 - 19,225,652 (-)NCBI
RefSeq Acc Id: XM_039098851   ⟹   XP_038954779
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,929,827 (-)NCBI
mRatBN7.22018,602,267 - 18,931,261 (-)NCBI
RefSeq Acc Id: XM_039098852   ⟹   XP_038954780
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,705,189 (-)NCBI
mRatBN7.22018,602,267 - 18,705,934 (-)NCBI
RefSeq Acc Id: XM_039098853   ⟹   XP_038954781
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,705,174 (-)NCBI
mRatBN7.22018,602,267 - 18,705,934 (-)NCBI
RefSeq Acc Id: XM_063279248   ⟹   XP_063135318
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,933,241 (-)NCBI
RefSeq Acc Id: XM_063279249   ⟹   XP_063135319
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,933,242 (-)NCBI
RefSeq Acc Id: XM_063279250   ⟹   XP_063135320
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,933,238 (-)NCBI
RefSeq Acc Id: XM_063279251   ⟹   XP_063135321
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,933,241 (-)NCBI
RefSeq Acc Id: XM_063279252   ⟹   XP_063135322
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 19,085,407 (-)NCBI
RefSeq Acc Id: XM_063279253   ⟹   XP_063135323
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,933,241 (-)NCBI
RefSeq Acc Id: XM_063279254   ⟹   XP_063135324
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,933,238 (-)NCBI
RefSeq Acc Id: XM_063279255   ⟹   XP_063135325
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,933,239 (-)NCBI
RefSeq Acc Id: XM_063279256   ⟹   XP_063135326
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,933,238 (-)NCBI
RefSeq Acc Id: XM_063279257   ⟹   XP_063135327
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,933,238 (-)NCBI
RefSeq Acc Id: XM_063279258   ⟹   XP_063135328
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 19,085,407 (-)NCBI
RefSeq Acc Id: XM_063279259   ⟹   XP_063135329
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,933,237 (-)NCBI
RefSeq Acc Id: XM_063279260   ⟹   XP_063135330
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,933,235 (-)NCBI
RefSeq Acc Id: XM_063279261   ⟹   XP_063135331
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,933,235 (-)NCBI
RefSeq Acc Id: XM_063279262   ⟹   XP_063135332
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,933,235 (-)NCBI
RefSeq Acc Id: XM_063279263   ⟹   XP_063135333
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,933,238 (-)NCBI
RefSeq Acc Id: XM_063279264   ⟹   XP_063135334
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,933,236 (-)NCBI
RefSeq Acc Id: XM_063279265   ⟹   XP_063135335
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,933,235 (-)NCBI
RefSeq Acc Id: XM_063279266   ⟹   XP_063135336
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,933,236 (-)NCBI
RefSeq Acc Id: XM_063279267   ⟹   XP_063135337
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,929,902 (-)NCBI
RefSeq Acc Id: XM_063279268   ⟹   XP_063135338
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,929,878 (-)NCBI
RefSeq Acc Id: XM_063279269   ⟹   XP_063135339
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 19,085,407 (-)NCBI
RefSeq Acc Id: XM_063279270   ⟹   XP_063135340
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,929,872 (-)NCBI
RefSeq Acc Id: XM_063279271   ⟹   XP_063135341
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,929,874 (-)NCBI
RefSeq Acc Id: XM_063279272   ⟹   XP_063135342
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,929,855 (-)NCBI
RefSeq Acc Id: XM_063279273   ⟹   XP_063135343
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 19,224,790 (-)NCBI
RefSeq Acc Id: XM_063279274   ⟹   XP_063135344
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,929,840 (-)NCBI
RefSeq Acc Id: XM_063279275   ⟹   XP_063135345
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,929,843 (-)NCBI
RefSeq Acc Id: XM_063279276   ⟹   XP_063135346
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,611,031 - 18,929,850 (-)NCBI
RefSeq Acc Id: XM_063279277   ⟹   XP_063135347
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,929,835 (-)NCBI
RefSeq Acc Id: XM_063279278   ⟹   XP_063135348
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,929,839 (-)NCBI
RefSeq Acc Id: XM_063279279   ⟹   XP_063135349
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,705,197 (-)NCBI
RefSeq Acc Id: XM_063279280   ⟹   XP_063135350
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,705,176 (-)NCBI
RefSeq Acc Id: XM_063279281   ⟹   XP_063135351
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 19,085,407 (-)NCBI
RefSeq Acc Id: XM_063279282   ⟹   XP_063135352
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 19,085,407 (-)NCBI
RefSeq Acc Id: XM_063279283   ⟹   XP_063135353
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,933,237 (-)NCBI
RefSeq Acc Id: XM_063279284   ⟹   XP_063135354
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,933,235 (-)NCBI
RefSeq Acc Id: XM_063279285   ⟹   XP_063135355
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82018,601,307 - 18,933,235 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001029156 (Get FASTA)   NCBI Sequence Viewer  
  NP_113993 (Get FASTA)   NCBI Sequence Viewer  
  XP_038954762 (Get FASTA)   NCBI Sequence Viewer  
  XP_038954764 (Get FASTA)   NCBI Sequence Viewer  
  XP_038954766 (Get FASTA)   NCBI Sequence Viewer  
  XP_038954767 (Get FASTA)   NCBI Sequence Viewer  
  XP_038954770 (Get FASTA)   NCBI Sequence Viewer  
  XP_038954772 (Get FASTA)   NCBI Sequence Viewer  
  XP_038954773 (Get FASTA)   NCBI Sequence Viewer  
  XP_038954777 (Get FASTA)   NCBI Sequence Viewer  
  XP_038954778 (Get FASTA)   NCBI Sequence Viewer  
  XP_038954779 (Get FASTA)   NCBI Sequence Viewer  
  XP_038954780 (Get FASTA)   NCBI Sequence Viewer  
  XP_038954781 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135318 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135319 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135320 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135321 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135322 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135323 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135324 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135325 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135326 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135327 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135328 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135329 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135330 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135331 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135332 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135333 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135334 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135335 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135336 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135337 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135338 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135339 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135340 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135341 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135342 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135343 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135344 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135345 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135346 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135347 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135348 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135349 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135350 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135351 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135352 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135353 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135354 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135355 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAC18852 (Get FASTA)   NCBI Sequence Viewer  
  AAC18853 (Get FASTA)   NCBI Sequence Viewer  
  AAC34809 (Get FASTA)   NCBI Sequence Viewer  
  AAC78143 (Get FASTA)   NCBI Sequence Viewer  
  AAI01886 (Get FASTA)   NCBI Sequence Viewer  
  CAD21705 (Get FASTA)   NCBI Sequence Viewer  
  CAH19219 (Get FASTA)   NCBI Sequence Viewer  
  CAH19220 (Get FASTA)   NCBI Sequence Viewer  
  CAH19221 (Get FASTA)   NCBI Sequence Viewer  
  CAH19222 (Get FASTA)   NCBI Sequence Viewer  
  CAH19223 (Get FASTA)   NCBI Sequence Viewer  
  CAH19224 (Get FASTA)   NCBI Sequence Viewer  
  CAH19225 (Get FASTA)   NCBI Sequence Viewer  
  EDL97280 (Get FASTA)   NCBI Sequence Viewer  
  EDL97281 (Get FASTA)   NCBI Sequence Viewer  
  EDL97282 (Get FASTA)   NCBI Sequence Viewer  
  EDL97283 (Get FASTA)   NCBI Sequence Viewer  
  EDL97284 (Get FASTA)   NCBI Sequence Viewer  
  EDL97285 (Get FASTA)   NCBI Sequence Viewer  
  EDL97286 (Get FASTA)   NCBI Sequence Viewer  
  EDL97287 (Get FASTA)   NCBI Sequence Viewer  
  EDL97288 (Get FASTA)   NCBI Sequence Viewer  
  EDL97289 (Get FASTA)   NCBI Sequence Viewer  
  EDL97290 (Get FASTA)   NCBI Sequence Viewer  
  EDL97291 (Get FASTA)   NCBI Sequence Viewer  
  EDL97292 (Get FASTA)   NCBI Sequence Viewer  
  EDL97293 (Get FASTA)   NCBI Sequence Viewer  
  EDL97294 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000069120.2
  ENSRNOP00000071472.2
  ENSRNOP00000071942
  ENSRNOP00000071942.2
  ENSRNOP00000071958.2
  ENSRNOP00000072180.2
  ENSRNOP00000072993
  ENSRNOP00000072993.2
  ENSRNOP00000082903.1
  ENSRNOP00000088269.1
  ENSRNOP00000088491.1
  ENSRNOP00000095836.1
GenBank Protein O70511 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_113993   ⟸   NM_031805
- Peptide Label: isoform 1
- UniProtKB: O70511 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001029156   ⟸   NM_001033984
- Peptide Label: isoform 2
- UniProtKB: Q8VDA0 (UniProtKB/Swiss-Prot),   Q574E2 (UniProtKB/Swiss-Prot),   Q574E0 (UniProtKB/Swiss-Prot),   Q574D9 (UniProtKB/Swiss-Prot),   Q574D8 (UniProtKB/Swiss-Prot),   Q574D7 (UniProtKB/Swiss-Prot),   O70511 (UniProtKB/Swiss-Prot),   A6JKS2 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000072180   ⟸   ENSRNOT00000079630
Ensembl Acc Id: ENSRNOP00000071472   ⟸   ENSRNOT00000082181
Ensembl Acc Id: ENSRNOP00000071958   ⟸   ENSRNOT00000077620
Ensembl Acc Id: ENSRNOP00000071942   ⟸   ENSRNOT00000090273
Ensembl Acc Id: ENSRNOP00000069120   ⟸   ENSRNOT00000091044
Ensembl Acc Id: ENSRNOP00000072993   ⟸   ENSRNOT00000085985
RefSeq Acc Id: XP_038954772   ⟸   XM_039098844
- Peptide Label: isoform X30
RefSeq Acc Id: XP_038954773   ⟸   XM_039098845
- Peptide Label: isoform X33
RefSeq Acc Id: XP_038954777   ⟸   XM_039098849
- Peptide Label: isoform X35
RefSeq Acc Id: XP_038954779   ⟸   XM_039098851
- Peptide Label: isoform X40
RefSeq Acc Id: XP_038954770   ⟸   XM_039098842
- Peptide Label: isoform X28
RefSeq Acc Id: XP_038954767   ⟸   XM_039098839
- Peptide Label: isoform X24
RefSeq Acc Id: XP_038954764   ⟸   XM_039098836
- Peptide Label: isoform X15
- UniProtKB: A0A8I5ZUT6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038954762   ⟸   XM_039098834
- Peptide Label: isoform X14
- UniProtKB: A0A8I5ZUT6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038954766   ⟸   XM_039098838
- Peptide Label: isoform X22
- UniProtKB: A0A8I6A9I9 (UniProtKB/TrEMBL),   A6JKS2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038954781   ⟸   XM_039098853
- Peptide Label: isoform X44
- UniProtKB: A6JKS6 (UniProtKB/TrEMBL),   Q3T1J5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038954780   ⟸   XM_039098852
- Peptide Label: isoform X43
- UniProtKB: A6JKS7 (UniProtKB/TrEMBL),   Q3T1J5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038954778   ⟸   XM_039098850
- Peptide Label: isoform X37
Ensembl Acc Id: ENSRNOP00000088269   ⟸   ENSRNOT00000111832
Ensembl Acc Id: ENSRNOP00000095836   ⟸   ENSRNOT00000116271
Ensembl Acc Id: ENSRNOP00000088491   ⟸   ENSRNOT00000100191
Ensembl Acc Id: ENSRNOP00000082903   ⟸   ENSRNOT00000117152
RefSeq Acc Id: XP_063135343   ⟸   XM_063279273
- Peptide Label: isoform X32
RefSeq Acc Id: XP_063135352   ⟸   XM_063279282
- Peptide Label: isoform X47
RefSeq Acc Id: XP_063135351   ⟸   XM_063279281
- Peptide Label: isoform X46
RefSeq Acc Id: XP_063135339   ⟸   XM_063279269
- Peptide Label: isoform X26
RefSeq Acc Id: XP_063135328   ⟸   XM_063279258
- Peptide Label: isoform X11
RefSeq Acc Id: XP_063135322   ⟸   XM_063279252
- Peptide Label: isoform X5
RefSeq Acc Id: XP_063135319   ⟸   XM_063279249
- Peptide Label: isoform X2
RefSeq Acc Id: XP_063135323   ⟸   XM_063279253
- Peptide Label: isoform X6
RefSeq Acc Id: XP_063135321   ⟸   XM_063279251
- Peptide Label: isoform X4
RefSeq Acc Id: XP_063135318   ⟸   XM_063279248
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063135325   ⟸   XM_063279255
- Peptide Label: isoform X8
RefSeq Acc Id: XP_063135327   ⟸   XM_063279257
- Peptide Label: isoform X10
RefSeq Acc Id: XP_063135326   ⟸   XM_063279256
- Peptide Label: isoform X9
RefSeq Acc Id: XP_063135324   ⟸   XM_063279254
- Peptide Label: isoform X7
RefSeq Acc Id: XP_063135333   ⟸   XM_063279263
- Peptide Label: isoform X18
RefSeq Acc Id: XP_063135320   ⟸   XM_063279250
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063135329   ⟸   XM_063279259
- Peptide Label: isoform X12
RefSeq Acc Id: XP_063135353   ⟸   XM_063279283
- Peptide Label: isoform X48
RefSeq Acc Id: XP_063135336   ⟸   XM_063279266
- Peptide Label: isoform X21
RefSeq Acc Id: XP_063135334   ⟸   XM_063279264
- Peptide Label: isoform X19
RefSeq Acc Id: XP_063135332   ⟸   XM_063279262
- Peptide Label: isoform X17
RefSeq Acc Id: XP_063135355   ⟸   XM_063279285
- Peptide Label: isoform X50
RefSeq Acc Id: XP_063135331   ⟸   XM_063279261
- Peptide Label: isoform X16
RefSeq Acc Id: XP_063135354   ⟸   XM_063279284
- Peptide Label: isoform X49
RefSeq Acc Id: XP_063135330   ⟸   XM_063279260
- Peptide Label: isoform X13
RefSeq Acc Id: XP_063135335   ⟸   XM_063279265
- Peptide Label: isoform X20
RefSeq Acc Id: XP_063135337   ⟸   XM_063279267
- Peptide Label: isoform X23
RefSeq Acc Id: XP_063135338   ⟸   XM_063279268
- Peptide Label: isoform X25
RefSeq Acc Id: XP_063135341   ⟸   XM_063279271
- Peptide Label: isoform X29
RefSeq Acc Id: XP_063135340   ⟸   XM_063279270
- Peptide Label: isoform X27
RefSeq Acc Id: XP_063135342   ⟸   XM_063279272
- Peptide Label: isoform X31
RefSeq Acc Id: XP_063135345   ⟸   XM_063279275
- Peptide Label: isoform X36
RefSeq Acc Id: XP_063135344   ⟸   XM_063279274
- Peptide Label: isoform X34
RefSeq Acc Id: XP_063135348   ⟸   XM_063279278
- Peptide Label: isoform X41
RefSeq Acc Id: XP_063135347   ⟸   XM_063279277
- Peptide Label: isoform X39
RefSeq Acc Id: XP_063135349   ⟸   XM_063279279
- Peptide Label: isoform X42
RefSeq Acc Id: XP_063135350   ⟸   XM_063279280
- Peptide Label: isoform X45
RefSeq Acc Id: XP_063135346   ⟸   XM_063279276
- Peptide Label: isoform X38
Protein Domains
Death   ZU5

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O70511-F1-model_v2 AlphaFold O70511 1-2622 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:620157 AgrOrtholog
BioCyc Gene G2FUF-3972 BioCyc
Ensembl Genes ENSRNOG00000053288 Ensembl, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000077620.2 UniProtKB/TrEMBL
  ENSRNOT00000079630.2 UniProtKB/TrEMBL
  ENSRNOT00000082181.2 UniProtKB/TrEMBL
  ENSRNOT00000085985 UniProtKB/TrEMBL
  ENSRNOT00000085985.2 UniProtKB/Swiss-Prot
  ENSRNOT00000090273 UniProtKB/TrEMBL
  ENSRNOT00000090273.2 UniProtKB/Swiss-Prot
  ENSRNOT00000091044.2 UniProtKB/TrEMBL
  ENSRNOT00000100191.1 UniProtKB/TrEMBL
  ENSRNOT00000111832.1 UniProtKB/TrEMBL
  ENSRNOT00000116271.1 UniProtKB/TrEMBL
  ENSRNOT00000117152.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.533.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  1.25.40.20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.60.220.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.60.40.2660 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Ank3_Death UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ankyrin_rpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ankyrin_UPA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DEATH-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Death_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  E3_Ligase-Neurotoxin UniProtKB/TrEMBL
  Multifunctional_ANK_Repeat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZU5_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:361833 UniProtKB/Swiss-Prot
NCBI Gene Ank3 ENTREZGENE
PANTHER ANKYRIN 2A, NEURONAL UniProtKB/TrEMBL
  ANKYRIN DOMAIN-CONTAINING UniProtKB/TrEMBL
  ANKYRIN REPEAT AND DEATH DOMAIN-CONTAINING 1B UniProtKB/Swiss-Prot
  ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
  ANKYRIN REPEAT-CONTAINING UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ANKYRIN-3 UniProtKB/TrEMBL
  ANKYRIN-3 UniProtKB/TrEMBL
Pfam Ank UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ank_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ank_4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Death UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  UPA_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZU5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ank3 PhenoGen
PRINTS ANKYRIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE ANK_REP_REGION UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ANK_REPEAT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DEATH_DOMAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZU5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000053288 RatGTEx
SMART ANK UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DEATH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZU5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF47986 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF48403 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0G2JUJ5_RAT UniProtKB/TrEMBL
  A0A0G2K0J3_RAT UniProtKB/TrEMBL
  A0A0G2K1Q7_RAT UniProtKB/TrEMBL
  A0A0G2K1R9_RAT UniProtKB/TrEMBL
  A0A0G2K2B9_RAT UniProtKB/TrEMBL
  A0A0G2K4D0_RAT UniProtKB/TrEMBL
  A0A8I5ZUT6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6A9I9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6APX6_RAT UniProtKB/TrEMBL
  A0A8I6GG13_RAT UniProtKB/TrEMBL
  A6JKR4_RAT UniProtKB/TrEMBL
  A6JKR5_RAT UniProtKB/TrEMBL
  A6JKR6_RAT UniProtKB/TrEMBL
  A6JKR7_RAT UniProtKB/TrEMBL
  A6JKR8_RAT UniProtKB/TrEMBL
  A6JKR9_RAT UniProtKB/TrEMBL
  A6JKS0_RAT UniProtKB/TrEMBL
  A6JKS1_RAT UniProtKB/TrEMBL
  A6JKS2 ENTREZGENE, UniProtKB/TrEMBL
  A6JKS4_RAT UniProtKB/TrEMBL
  A6JKS5_RAT UniProtKB/TrEMBL
  A6JKS6 ENTREZGENE, UniProtKB/TrEMBL
  A6JKS7 ENTREZGENE, UniProtKB/TrEMBL
  A6JKS8_RAT UniProtKB/TrEMBL
  ANK3_RAT UniProtKB/Swiss-Prot
  O70510_RAT UniProtKB/TrEMBL
  O70511 ENTREZGENE
  Q3T1J5 ENTREZGENE, UniProtKB/TrEMBL
  Q574D7 ENTREZGENE
  Q574D8 ENTREZGENE
  Q574D9 ENTREZGENE
  Q574E0 ENTREZGENE
  Q574E1_RAT UniProtKB/TrEMBL
  Q574E2 ENTREZGENE
  Q792M9_RAT UniProtKB/TrEMBL
  Q8VDA0 ENTREZGENE
UniProt Secondary Q574D7 UniProtKB/Swiss-Prot
  Q574D8 UniProtKB/Swiss-Prot
  Q574D9 UniProtKB/Swiss-Prot
  Q574E0 UniProtKB/Swiss-Prot
  Q574E2 UniProtKB/Swiss-Prot
  Q8VDA0 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-18 Ank3  ankyrin 3  Ank3  ankyrin 3, node of Ranvier (ankyrin G)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2013-01-29 Ank3  ankyrin 3, node of Ranvier (ankyrin G)  Ank3  ankyrin 3, node of Ranvier  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-10-12 Ank3        Symbol and Name status set to provisional 70820 PROVISIONAL
2005-10-05   ankyrin 3, epithelial  Ank3  ankyrin 3, epithelial isoform g  Name updated to reflect Mouse nomenclature 1299863 APPROVED
2005-01-20 Ank3  ankyrin 3, epithelial isoform g    ankyrin 3 (G)  Name updated 1299863 APPROVED
2002-08-07 Ank3  ankyrin 3 (G)      Symbol and Name status set to provisional 70820 PROVISIONAL

RGD Curation Notes
Note Type Note Reference
gene_cellular_localization localize to the postsynaptic folds and to the sarcoplasmic reticulum 619703
gene_cellular_localization localize to the postsynaptic folds and to the sarcoplasmic reticulum 631996
gene_domains contains a spectrin-binding domain 631996
gene_transcript transcripts of 8.0 kb and 5.6 kb are detected 631996