Sorbs2 (sorbin and SH3 domain containing 2) - Rat Genome Database

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Gene: Sorbs2 (sorbin and SH3 domain containing 2) Rattus norvegicus
Analyze
Symbol: Sorbs2
Name: sorbin and SH3 domain containing 2
RGD ID: 620061
Description: Predicted to enable identical protein binding activity and protein domain specific binding activity. Involved in cell growth involved in cardiac muscle cell development. Located in dendrite and neuronal cell body. Orthologous to human SORBS2 (sorbin and SH3 domain containing 2); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 3H-1,2-dithiole-3-thione.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: arg-binding protein 2; arg/Abl-interacting protein 2; Arg/Abl-interacting protein ArgBP2; Argbp2; nArgBP2; neural ArgBP2; sorbin and SH3 domain-containing protein 2
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81653,167,795 - 53,481,300 (-)NCBIGRCr8
mRatBN7.21646,435,220 - 46,748,743 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1646,435,237 - 46,626,514 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1651,837,443 - 52,028,439 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01655,206,227 - 55,397,004 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01650,476,834 - 50,667,832 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01649,626,205 - 49,820,223 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1649,626,205 - 49,820,235 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01649,355,585 - 49,545,430 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41649,722,539 - 49,917,550 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11649,722,613 - 49,917,626 (-)NCBI
Celera1644,432,235 - 44,623,524 (-)NCBICelera
Cytogenetic Map16q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-butoxyethanol  (ISO)
3,4-methylenedioxymethamphetamine  (ISO)
3H-1,2-dithiole-3-thione  (EXP)
4-hydroxyphenyl retinamide  (ISO)
6-propyl-2-thiouracil  (EXP)
7,12-dimethyltetraphene  (ISO)
acrolein  (ISO)
acrylamide  (EXP)
aflatoxin B1  (ISO)
aflatoxin M1  (ISO)
all-trans-retinoic acid  (ISO)
alpha-pinene  (ISO)
asbestos  (ISO)
azathioprine  (ISO)
benzo[a]pyrene  (ISO)
benzo[e]pyrene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
buta-1,3-diene  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (EXP,ISO)
caffeine  (ISO)
cantharidin  (ISO)
carmustine  (ISO)
CGP 52608  (ISO)
ciguatoxin CTX1B  (ISO)
cisplatin  (ISO)
cobalt dichloride  (EXP,ISO)
copper atom  (EXP)
copper(0)  (EXP)
copper(II) sulfate  (ISO)
corticosterone  (EXP)
coumarin  (ISO)
cyclosporin A  (ISO)
cytarabine  (ISO)
deoxynivalenol  (ISO)
dibutyl phthalate  (EXP,ISO)
dioxygen  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (EXP)
ethanol  (ISO)
etoposide  (ISO)
flutamide  (EXP)
FR900359  (ISO)
genistein  (ISO)
gentamycin  (EXP)
lead(0)  (ISO)
Licochalcone B  (ISO)
methapyrilene  (ISO)
methylmercury chloride  (ISO)
mono(2-ethylhexyl) phthalate  (ISO)
nickel atom  (ISO)
nimesulide  (EXP)
ozone  (ISO)
paracetamol  (EXP,ISO)
perfluorohexanesulfonic acid  (ISO)
perfluorooctane-1-sulfonic acid  (EXP)
perfluorooctanoic acid  (EXP)
phenobarbital  (EXP,ISO)
phenylmercury acetate  (ISO)
progesterone  (ISO)
quercetin  (ISO)
rimonabant  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenite  (EXP,ISO)
succimer  (ISO)
sulforaphane  (ISO)
sunitinib  (ISO)
testosterone  (ISO)
tetrachloromethane  (ISO)
thimerosal  (ISO)
thioacetamide  (EXP)
titanium dioxide  (ISO)
trichloroethene  (EXP)
trichostatin A  (ISO)
triclosan  (ISO)
triptonide  (ISO)
undecane  (EXP)
urethane  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Cardiac fibroblast-derived microRNA passenger strand-enriched exosomes mediate cardiomyocyte hypertrophy. Bang C, etal., J Clin Invest. 2014 May;124(5):2136-46. doi: 10.1172/JCI70577. Epub 2014 Apr 17.
2. The Abl/Arg substrate ArgBP2/nArgBP2 coordinates the function of multiple regulatory mechanisms converging on the actin cytoskeleton. Cestra G, etal., Proc Natl Acad Sci U S A. 2005 Feb 1;102(5):1731-6. Epub 2005 Jan 19.
3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4. nArgBP2, a novel neural member of ponsin/ArgBP2/vinexin family that interacts with synapse-associated protein 90/postsynaptic density-95-associated protein (SAPAP). Kawabe H, etal., J Biol Chem 1999 Oct 22;274(43):30914-8.
5. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. CAP (Cbl associated protein) regulates receptor-mediated endocytosis. Tosoni D and Cestra G, FEBS Lett. 2009 Jan 22;583(2):293-300. doi: 10.1016/j.febslet.2008.12.047. Epub 2008 Dec 29.
Additional References at PubMed
PMID:21689717   PMID:22007191   PMID:22658674   PMID:23117660   PMID:26514267   PMID:26527617   PMID:27226294   PMID:29476059   PMID:31904090   PMID:35352799  


Genomics

Comparative Map Data
Sorbs2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81653,167,795 - 53,481,300 (-)NCBIGRCr8
mRatBN7.21646,435,220 - 46,748,743 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1646,435,237 - 46,626,514 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1651,837,443 - 52,028,439 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01655,206,227 - 55,397,004 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01650,476,834 - 50,667,832 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01649,626,205 - 49,820,223 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1649,626,205 - 49,820,235 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01649,355,585 - 49,545,430 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41649,722,539 - 49,917,550 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11649,722,613 - 49,917,626 (-)NCBI
Celera1644,432,235 - 44,623,524 (-)NCBICelera
Cytogenetic Map16q11NCBI
SORBS2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384185,585,523 - 185,956,372 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4185,585,444 - 185,956,652 (-)EnsemblGRCh38hg38GRCh38
GRCh374186,506,677 - 186,877,526 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 364186,743,592 - 187,114,516 (-)NCBINCBI36Build 36hg18NCBI36
Build 344186,883,307 - 187,252,671NCBI
Celera4183,831,196 - 184,201,888 (-)NCBICelera
Cytogenetic Map4q35.1NCBI
HuRef4182,259,256 - 182,629,702 (-)NCBIHuRef
CHM1_14186,483,030 - 186,854,309 (-)NCBICHM1_1
T2T-CHM13v2.04188,926,307 - 189,297,353 (-)NCBIT2T-CHM13v2.0
Sorbs2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39845,960,470 - 46,280,943 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl845,960,825 - 46,280,943 (+)EnsemblGRCm39 Ensembl
GRCm38845,507,788 - 45,827,906 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl845,507,788 - 45,827,906 (+)EnsemblGRCm38mm10GRCm38
MGSCv37846,593,149 - 46,913,258 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36847,006,441 - 47,326,723 (+)NCBIMGSCv36mm8
Celera848,191,097 - 48,511,228 (+)NCBICelera
Cytogenetic Map8B1.1NCBI
cM Map825.44NCBI
Sorbs2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540323,371,143 - 23,503,654 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540323,295,887 - 23,503,654 (+)NCBIChiLan1.0ChiLan1.0
SORBS2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23183,323,194 - 183,696,934 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14183,671,541 - 184,046,607 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v04177,751,089 - 178,125,937 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14189,965,729 - 190,335,930 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4189,965,729 - 190,070,543 (-)Ensemblpanpan1.1panPan2
SORBS2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11644,847,384 - 45,063,218 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1644,717,052 - 45,061,337 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1645,333,197 - 45,548,530 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01647,061,067 - 47,276,497 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1646,931,094 - 47,276,497 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11645,029,526 - 45,244,827 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01645,641,875 - 45,857,362 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01645,773,830 - 45,988,803 (+)NCBIUU_Cfam_GSD_1.0
Sorbs2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494334,312,658 - 34,634,656 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365543,593,512 - 3,797,555 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365543,593,607 - 3,797,324 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SORBS2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1546,585,602 - 46,795,038 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11546,585,599 - 46,910,679 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21553,377,736 - 53,516,595 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SORBS2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.17131,522,390 - 131,895,835 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl7131,521,298 - 131,749,949 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037111,789,062 - 112,214,360 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Sorbs2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476916,436,923 - 16,541,141 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476916,437,631 - 16,835,725 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Sorbs2
2694 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:358
Count of miRNA genes:235
Interacting mature miRNAs:271
Transcripts:ENSRNOT00000029628, ENSRNOT00000068069
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1600378Arunc4Aerobic running capacity QTL 40.03exercise endurance trait (VT:0002332)maximum distance run on treadmill (CMO:0001406)1638024580345693Rat
2312660Bw95Body weight QTL 950.05inguinal fat pad mass (VT:0010424)inguinal fat pad weight to body weight ratio (CMO:0001253)1683223659492508Rat
2312663Slep9Serum leptin concentration QTL 90.001blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)1683223659492508Rat
2312666Insul16Insulin level QTL 160.01blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1683223659492508Rat
2312669Stl23Serum triglyceride level QTL 230.01blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)1683223659492508Rat
737819Hcas4Hepatocarcinoma susceptibility QTL 44.43liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)16422760946975965Rat
61405Niddm6Non-insulin dependent diabetes mellitus QTL 63.660.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)16422760948972724Rat
61338Bp23Blood pressure QTL 234.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16422760949227609Rat
737826Alc11Alcohol consumption QTL 113.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16422760960252231Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor depth of invasion (CMO:0001888)161769679182635055Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor depth of invasion (CMO:0001888)161769679182635055Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor diameter (CMO:0001889)161769679182635055Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor diameter (CMO:0001889)161769679182635055Rat
70215Niddm29Non-insulin dependent diabetes mellitus QTL 293.54blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)161900443575226532Rat
2302057Pia29Pristane induced arthritis QTL 293.60.001blood autoantibody amount (VT:0003725)serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)162173597566735975Rat
8694453Bw172Body weight QTL 1728.330.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)162432551369325513Rat
6903294Stl30Serum triglyceride level QTL 302.60.0013blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)162515279370152793Rat
1298529Arunc1Aerobic running capacity QTL 14exercise endurance trait (VT:0002332)maximum distance run on treadmill (CMO:0001406)163195152060148445Rat
1578768Stresp22Stress response QTL 222.8thymus mass (VT:0004954)thymus wet weight (CMO:0000855)163528887080288870Rat
2293690Bss45Bone structure and strength QTL 455.130.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)163775215682752156Rat
2300163Bmd64Bone mineral density QTL 645.30.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)163775215682752156Rat
7205510Activ5Activity QTL 53.780.00028locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)164239634584729064Rat
631833Sach2Saccharin preference QTL 240.01consumption behavior trait (VT:0002069)calculated saccharin drink intake rate (CMO:0001613)164302484250166018Rat

Markers in Region
AW532810  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21646,596,775 - 46,596,931 (+)MAPPERmRatBN7.2
Rnor_6.01649,794,030 - 49,794,186NCBIRnor6.0
Rnor_6.01649,788,653 - 49,788,807NCBIRnor6.0
Celera1644,593,745 - 44,593,900UniSTS
RH 3.4 Map16457.0UniSTS
Cytogenetic Map16q11UniSTS
BE109620  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21646,471,079 - 46,471,234 (+)MAPPERmRatBN7.2
Rnor_6.01649,662,015 - 49,662,169NCBIRnor6.0
Rnor_5.01649,391,395 - 49,391,549UniSTSRnor5.0
RGSC_v3.41649,758,349 - 49,758,503UniSTSRGSC3.4
Celera1644,468,049 - 44,468,203UniSTS
RH 3.4 Map16456.9UniSTS
Cytogenetic Map16q11UniSTS
AW434052  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21646,435,276 - 46,435,467 (+)MAPPERmRatBN7.2
Rnor_6.01649,626,213 - 49,626,403NCBIRnor6.0
Rnor_5.01649,355,593 - 49,355,783UniSTSRnor5.0
RGSC_v3.41649,722,547 - 49,722,737UniSTSRGSC3.4
Celera1644,432,243 - 44,432,433UniSTS
RH 3.4 Map16457.0UniSTS
Cytogenetic Map16q11UniSTS
BE114613  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21646,546,851 - 46,547,024 (+)MAPPERmRatBN7.2
Rnor_6.01649,737,769 - 49,737,941NCBIRnor6.0
Rnor_5.01649,466,481 - 49,466,653UniSTSRnor5.0
RGSC_v3.41649,834,146 - 49,834,318UniSTSRGSC3.4
Celera1644,543,702 - 44,543,874UniSTS
RH 3.4 Map16457.3UniSTS
Cytogenetic Map16q11UniSTS
D8Mit297  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21646,596,211 - 46,596,325 (+)MAPPERmRatBN7.2
Rnor_6.01649,788,421 - 49,788,534NCBIRnor6.0
Rnor_5.01649,515,948 - 49,516,061UniSTSRnor5.0
Cytogenetic Map16q11UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 43 34 25 12 25 74 29 29 4
Low 23 16 7 16 8 11 6 12 7 8
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_053770 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039094137 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039094138 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063274989 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063274991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063274992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063274993 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063274994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063274995 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063274996 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063274997 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063274998 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063274999 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275000 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275022 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275023 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275024 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275025 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275030 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275032 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275036 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275037 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC108583 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC114502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF026505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF396458 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473995 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ227457 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSRNOT00000029628   ⟹   ENSRNOP00000029182
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1646,435,269 - 46,626,450 (-)Ensembl
Rnor_6.0 Ensembl1649,626,205 - 49,820,235 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000096919   ⟹   ENSRNOP00000090759
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1646,435,237 - 46,626,514 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000111098   ⟹   ENSRNOP00000078055
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1646,435,269 - 46,514,234 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000111730   ⟹   ENSRNOP00000094779
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1646,435,457 - 46,626,021 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000113085   ⟹   ENSRNOP00000091476
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1646,435,237 - 46,626,514 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000115009   ⟹   ENSRNOP00000089017
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1646,435,237 - 46,626,514 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000115122   ⟹   ENSRNOP00000080598
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1646,435,237 - 46,626,514 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000116775   ⟹   ENSRNOP00000083015
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1646,435,237 - 46,567,298 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000118135   ⟹   ENSRNOP00000077815
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1646,442,367 - 46,626,514 (-)Ensembl
RefSeq Acc Id: NM_053770   ⟹   NP_446222
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,827 - 53,358,983 (-)NCBI
mRatBN7.21646,435,269 - 46,626,447 (-)NCBI
Rnor_6.01649,626,205 - 49,820,223 (-)NCBI
Rnor_5.01649,355,585 - 49,545,430 (-)NCBI
RGSC_v3.41649,722,539 - 49,917,550 (-)RGD
Celera1644,432,235 - 44,623,524 (-)RGD
Sequence:
RefSeq Acc Id: XM_039094137   ⟹   XP_038950065
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,481,300 (-)NCBI
mRatBN7.21646,435,220 - 46,559,755 (-)NCBI
RefSeq Acc Id: XM_039094138   ⟹   XP_038950066
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
mRatBN7.21646,435,220 - 46,559,758 (-)NCBI
RefSeq Acc Id: XM_063274989   ⟹   XP_063131059
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063274991   ⟹   XP_063131061
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063274992   ⟹   XP_063131062
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063274993   ⟹   XP_063131063
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063274994   ⟹   XP_063131064
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063274995   ⟹   XP_063131065
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063274996   ⟹   XP_063131066
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063274997   ⟹   XP_063131067
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063274998   ⟹   XP_063131068
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063274999   ⟹   XP_063131069
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275000   ⟹   XP_063131070
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275002   ⟹   XP_063131072
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,481,279 (-)NCBI
RefSeq Acc Id: XM_063275003   ⟹   XP_063131073
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275004   ⟹   XP_063131074
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275005   ⟹   XP_063131075
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275006   ⟹   XP_063131076
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275007   ⟹   XP_063131077
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275008   ⟹   XP_063131078
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275009   ⟹   XP_063131079
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275010   ⟹   XP_063131080
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275011   ⟹   XP_063131081
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275012   ⟹   XP_063131082
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275013   ⟹   XP_063131083
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275014   ⟹   XP_063131084
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275015   ⟹   XP_063131085
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275016   ⟹   XP_063131086
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275017   ⟹   XP_063131087
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275018   ⟹   XP_063131088
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275019   ⟹   XP_063131089
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275020   ⟹   XP_063131090
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275021   ⟹   XP_063131091
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275022   ⟹   XP_063131092
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275023   ⟹   XP_063131093
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275024   ⟹   XP_063131094
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275025   ⟹   XP_063131095
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275026   ⟹   XP_063131096
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275027   ⟹   XP_063131097
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275028   ⟹   XP_063131098
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275029   ⟹   XP_063131099
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275030   ⟹   XP_063131100
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275031   ⟹   XP_063131101
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275032   ⟹   XP_063131102
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275033   ⟹   XP_063131103
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275034   ⟹   XP_063131104
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275035   ⟹   XP_063131105
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275036   ⟹   XP_063131106
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
RefSeq Acc Id: XM_063275037   ⟹   XP_063131107
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81653,167,795 - 53,359,893 (-)NCBI
Protein Sequences
Protein RefSeqs NP_446222 (Get FASTA)   NCBI Sequence Viewer  
  XP_038950065 (Get FASTA)   NCBI Sequence Viewer  
  XP_038950066 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131059 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131061 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131062 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131063 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131064 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131065 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131066 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131067 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131068 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131069 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131070 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131072 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131073 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131074 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131075 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131076 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131077 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131078 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131079 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131080 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131081 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131082 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131083 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131084 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131085 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131086 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131087 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131088 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131089 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131090 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131091 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131092 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131093 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131094 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131095 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131096 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131097 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131098 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131099 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131100 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131101 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131102 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131103 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131104 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131105 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131106 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131107 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAB81527 (Get FASTA)   NCBI Sequence Viewer  
  AAK81861 (Get FASTA)   NCBI Sequence Viewer  
  EDL78860 (Get FASTA)   NCBI Sequence Viewer  
  EDL78861 (Get FASTA)   NCBI Sequence Viewer  
  EDL78862 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000029182.5
  ENSRNOP00000077815.1
  ENSRNOP00000078055
  ENSRNOP00000078055.1
  ENSRNOP00000080598.1
  ENSRNOP00000083015.1
  ENSRNOP00000089017.1
  ENSRNOP00000090759.1
  ENSRNOP00000091476.1
  ENSRNOP00000094779.1
GenBank Protein O35413 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_446222   ⟸   NM_053770
- UniProtKB: Q923T8 (UniProtKB/Swiss-Prot),   O35413 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSRNOP00000029182   ⟸   ENSRNOT00000029628
RefSeq Acc Id: XP_038950066   ⟸   XM_039094138
- Peptide Label: isoform X16
- UniProtKB: Q923T8 (UniProtKB/Swiss-Prot),   O35413 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_038950065   ⟸   XM_039094137
- Peptide Label: isoform X15
- UniProtKB: Q923T8 (UniProtKB/Swiss-Prot),   O35413 (UniProtKB/Swiss-Prot),   A6JPR1 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSRNOP00000091476   ⟸   ENSRNOT00000113085
RefSeq Acc Id: ENSRNOP00000080598   ⟸   ENSRNOT00000115122
RefSeq Acc Id: ENSRNOP00000094779   ⟸   ENSRNOT00000111730
RefSeq Acc Id: ENSRNOP00000089017   ⟸   ENSRNOT00000115009
RefSeq Acc Id: ENSRNOP00000078055   ⟸   ENSRNOT00000111098
RefSeq Acc Id: ENSRNOP00000077815   ⟸   ENSRNOT00000118135
RefSeq Acc Id: ENSRNOP00000083015   ⟸   ENSRNOT00000116775
RefSeq Acc Id: ENSRNOP00000090759   ⟸   ENSRNOT00000096919
RefSeq Acc Id: XP_063131072   ⟸   XM_063275002
- Peptide Label: isoform X12
RefSeq Acc Id: XP_063131106   ⟸   XM_063275036
- Peptide Label: isoform X46
RefSeq Acc Id: XP_063131104   ⟸   XM_063275034
- Peptide Label: isoform X44
RefSeq Acc Id: XP_063131101   ⟸   XM_063275031
- Peptide Label: isoform X41
RefSeq Acc Id: XP_063131102   ⟸   XM_063275032
- Peptide Label: isoform X42
RefSeq Acc Id: XP_063131099   ⟸   XM_063275029
- Peptide Label: isoform X40
RefSeq Acc Id: XP_063131098   ⟸   XM_063275028
- Peptide Label: isoform X39
RefSeq Acc Id: XP_063131089   ⟸   XM_063275019
- Peptide Label: isoform X31
RefSeq Acc Id: XP_063131097   ⟸   XM_063275027
- Peptide Label: isoform X38
RefSeq Acc Id: XP_063131095   ⟸   XM_063275025
- Peptide Label: isoform X37
RefSeq Acc Id: XP_063131094   ⟸   XM_063275024
- Peptide Label: isoform X36
RefSeq Acc Id: XP_063131075   ⟸   XM_063275005
- Peptide Label: isoform X17
RefSeq Acc Id: XP_063131088   ⟸   XM_063275018
- Peptide Label: isoform X30
RefSeq Acc Id: XP_063131087   ⟸   XM_063275017
- Peptide Label: isoform X29
RefSeq Acc Id: XP_063131080   ⟸   XM_063275010
- Peptide Label: isoform X22
RefSeq Acc Id: XP_063131079   ⟸   XM_063275009
- Peptide Label: isoform X21
RefSeq Acc Id: XP_063131093   ⟸   XM_063275023
- Peptide Label: isoform X35
RefSeq Acc Id: XP_063131092   ⟸   XM_063275022
- Peptide Label: isoform X34
RefSeq Acc Id: XP_063131074   ⟸   XM_063275004
- Peptide Label: isoform X14
RefSeq Acc Id: XP_063131086   ⟸   XM_063275016
- Peptide Label: isoform X28
RefSeq Acc Id: XP_063131091   ⟸   XM_063275021
- Peptide Label: isoform X33
RefSeq Acc Id: XP_063131073   ⟸   XM_063275003
- Peptide Label: isoform X13
RefSeq Acc Id: XP_063131070   ⟸   XM_063275000
- Peptide Label: isoform X11
RefSeq Acc Id: XP_063131085   ⟸   XM_063275015
- Peptide Label: isoform X27
RefSeq Acc Id: XP_063131084   ⟸   XM_063275014
- Peptide Label: isoform X26
RefSeq Acc Id: XP_063131068   ⟸   XM_063274998
- Peptide Label: isoform X9
RefSeq Acc Id: XP_063131067   ⟸   XM_063274997
- Peptide Label: isoform X8
RefSeq Acc Id: XP_063131083   ⟸   XM_063275013
- Peptide Label: isoform X25
RefSeq Acc Id: XP_063131082   ⟸   XM_063275012
- Peptide Label: isoform X24
RefSeq Acc Id: XP_063131066   ⟸   XM_063274996
- Peptide Label: isoform X7
RefSeq Acc Id: XP_063131081   ⟸   XM_063275011
- Peptide Label: isoform X23
RefSeq Acc Id: XP_063131078   ⟸   XM_063275008
- Peptide Label: isoform X20
RefSeq Acc Id: XP_063131077   ⟸   XM_063275007
- Peptide Label: isoform X19
RefSeq Acc Id: XP_063131076   ⟸   XM_063275006
- Peptide Label: isoform X18
RefSeq Acc Id: XP_063131064   ⟸   XM_063274994
- Peptide Label: isoform X5
RefSeq Acc Id: XP_063131061   ⟸   XM_063274991
- Peptide Label: isoform X2
RefSeq Acc Id: XP_063131065   ⟸   XM_063274995
- Peptide Label: isoform X6
RefSeq Acc Id: XP_063131063   ⟸   XM_063274993
- Peptide Label: isoform X4
RefSeq Acc Id: XP_063131062   ⟸   XM_063274992
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063131059   ⟸   XM_063274989
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063131107   ⟸   XM_063275037
- Peptide Label: isoform X46
RefSeq Acc Id: XP_063131105   ⟸   XM_063275035
- Peptide Label: isoform X45
RefSeq Acc Id: XP_063131103   ⟸   XM_063275033
- Peptide Label: isoform X43
RefSeq Acc Id: XP_063131090   ⟸   XM_063275020
- Peptide Label: isoform X32
RefSeq Acc Id: XP_063131100   ⟸   XM_063275030
- Peptide Label: isoform X40
RefSeq Acc Id: XP_063131096   ⟸   XM_063275026
- Peptide Label: isoform X37
RefSeq Acc Id: XP_063131069   ⟸   XM_063274999
- Peptide Label: isoform X10
Protein Domains
SH3   SoHo

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O35413-F1-model_v2 AlphaFold O35413 1-1196 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13700106
Promoter ID:EPDNEW_R10630
Type:multiple initiation site
Name:Sorbs2_1
Description:sorbin and SH3 domain containing 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01649,819,808 - 49,819,868EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:620061 AgrOrtholog
BioCyc Gene G2FUF-11322 BioCyc
Ensembl Genes ENSRNOG00000013391 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000029628.7 UniProtKB/TrEMBL
  ENSRNOT00000096919.1 UniProtKB/TrEMBL
  ENSRNOT00000111098.1 UniProtKB/TrEMBL
  ENSRNOT00000111730.1 UniProtKB/TrEMBL
  ENSRNOT00000113085.1 UniProtKB/TrEMBL
  ENSRNOT00000115009.1 UniProtKB/TrEMBL
  ENSRNOT00000115122.1 UniProtKB/TrEMBL
  ENSRNOT00000116775.1 UniProtKB/TrEMBL
  ENSRNOT00000118135.1 UniProtKB/TrEMBL
Gene3D-CATH SH3 Domains UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro SH3-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SoHo_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:114901 UniProtKB/Swiss-Prot
NCBI Gene 114901 ENTREZGENE
PANTHER PTHR14167:SF56 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3 DOMAIN-CONTAINING UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam SH3_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3_9 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Sorb UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Sorbs2 PhenoGen
PRINTS P67PHOX UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3DOMAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE SH3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SOHO UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000013391 RatGTEx
SMART SH3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Sorb UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF50044 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A8I5XWJ4_RAT UniProtKB/TrEMBL
  A0A8I5YCM3_RAT UniProtKB/TrEMBL
  A0A8I5ZQ23_RAT UniProtKB/TrEMBL
  A0A8I5ZV05_RAT UniProtKB/TrEMBL
  A0A8I6AA99_RAT UniProtKB/TrEMBL
  A0A8I6ABV1_RAT UniProtKB/TrEMBL
  A0A8I6AFA3_RAT UniProtKB/TrEMBL
  A0A8I6AN94_RAT UniProtKB/TrEMBL
  A6JPQ9_RAT UniProtKB/TrEMBL
  A6JPR0_RAT UniProtKB/TrEMBL
  A6JPR1 ENTREZGENE, UniProtKB/TrEMBL
  F1LPM3_RAT UniProtKB/TrEMBL
  O35413 ENTREZGENE
  Q923T8 ENTREZGENE
  SRBS2_RAT UniProtKB/Swiss-Prot
UniProt Secondary Q923T8 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2010-04-20 Sorbs2  sorbin and SH3 domain containing 2  Argbp2  Arg/Abl-interacting protein ArgBP2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-01-20 Argbp2  Arg/Abl-interacting protein ArgBP2      Symbol and Name status set to approved 1299863 APPROVED
2002-08-07 Argbp2  Arg/Abl-interacting protein ArgBP2      Symbol and Name status set to provisional 70820 PROVISIONAL