Ddx5 (DEAD-box helicase 5) - Rat Genome Database

Name: Ddx5
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

	Submit Data \| Help \| Video Tutorials \| News \| Publications \| Download \| REST API \| Citing RGD \| Contact
	Search RGD Grant Resources Citing RGD About Us Contact Us Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease Find Models new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive Pathways Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
	Advanced Search (OLGA)

Gene: Ddx5 (DEAD-box helicase 5) Rattus norvegicus

Analyze

Symbol:

Ddx5

Name:

DEAD-box helicase 5

RGD ID:

619906

Description:

Enables several functions, including RNA helicase activity; calcium-dependent protein binding activity; and calmodulin binding activity. Involved in regulation of viral genome replication. Predicted to be located in nuclear speck and nucleolus. Predicted to be part of catalytic step 2 spliceosome. Predicted to be active in cytoplasm and nucleus. Orthologous to human DDX5 (DEAD-box helicase 5); PARTICIPATES IN estrogen signaling pathway; spliceosome pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 3-methylcholanthrene.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

ddx5 gene; DEAD (Asp-Glu-Ala-Asp) box helicase 5; DEAD (Asp-Glu-Ala-Asp) box polypeptide 5; p68 RNA helicase; probable ATP-dependent RNA helicase DDX5

RGD Orthologs

Human

Mouse

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	DDX5 (DEAD-box helicase 5)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Ddx5 (DEAD box helicase 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ddx5 (DEAD-box helicase 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	DDX5 (DEAD-box helicase 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	DDX5 (DEAD-box helicase 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ddx5 (DEAD-box helicase 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	DDX5 (DEAD-box helicase 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	DDX5 (DEAD-box helicase 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ddx5 (DEAD-box helicase 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	DDX5 (DEAD-box helicase 5)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Ddx5 (DEAD box helicase 5)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	ddx5 (DEAD (Asp-Glu-Ala-Asp) box helicase 5)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG10077	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	DBP2	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	ddx-17	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	ddx5	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	10	91,723,508 - 91,732,210 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	91,723,508 - 91,732,283 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	96,780,226 - 96,788,079 (-)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	10	96,243,401 - 96,251,254 (-)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	10	91,646,778 - 91,654,178 (-)	NCBI	Rnor_WKY
Rnor_6.0	10	94,979,759 - 94,988,461 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	94,980,928 - 94,988,461 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	94,726,626 - 94,734,161 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	96,131,888 - 96,139,423 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	96,150,818 - 96,151,721 (-)	NCBI
Celera	10	90,391,099 - 90,398,634 (-)	NCBI		Celera
Cytogenetic Map	10	q32.1	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Developmental Disabilities (ISO)

endometriosis (ISO)

genetic disease (ISO)

hyperkalemic periodic paralysis (ISO)

skin squamous cell carcinoma (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

17beta-hydroxy-17-methylestra-4,9,11-trien-3-one (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,3',4,4',5-Pentachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dinitrotoluene (EXP)

3',5'-cyclic UMP (ISO)

3,3',4,4'-tetrachlorobiphenyl (ISO)

3,3',5,5'-tetrabromobisphenol A (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

3-methylcholanthrene (EXP)

4,4'-diaminodiphenylmethane (ISO)

4-hydroxyphenyl retinamide (ISO)

7,12-dimethyltetraphene (ISO)

acetylsalicylic acid (ISO)

acrolein (ISO)

aflatoxin B1 (ISO)

alpha-naphthoflavone (EXP)

alpha-pinene (ISO)

ammonium chloride (EXP)

Aroclor 1254 (ISO)

arsenite(3-) (ISO)

arsenous acid (ISO)

atrazine (ISO)

azoxystrobin (EXP)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

benzo[b]fluoranthene (ISO)

Benzo[ghi]perylene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

Brodifacoum (EXP)

cadmium atom (ISO)

cadmium dichloride (ISO)

caffeine (ISO)

carbamazepine (ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

chloropicrin (ISO)

chlorpyrifos (EXP)

choline (ISO)

chrysene (ISO)

cisplatin (EXP)

copper atom (EXP)

copper(0) (EXP)

copper(II) sulfate (ISO)

CU-O LINKAGE (ISO)

decabromodiphenyl ether (ISO)

dexamethasone (ISO)

diarsenic trioxide (ISO)

dibutyl phthalate (EXP)

diclofenac (ISO)

dicrotophos (ISO)

diuron (EXP)

dorsomorphin (ISO)

enzyme inhibitor (ISO)

ethanol (ISO)

ethyl methanesulfonate (ISO)

fluoranthene (ISO)

folic acid (ISO)

gentamycin (EXP)

glyphosate (EXP)

haloperidol (ISO)

hydrogen peroxide (ISO)

imidacloprid (EXP)

indometacin (ISO)

irinotecan (ISO)

ivermectin (ISO)

L-methionine (ISO)

maneb (ISO)

methotrexate (ISO)

methyl methanesulfonate (ISO)

methylmercury chloride (ISO)

miconazole (ISO)

N-ethyl-N-nitrosourea (ISO)

ozone (ISO)

paracetamol (EXP,ISO)

paraquat (ISO)

pentachlorophenol (ISO)

perfluorooctane-1-sulfonic acid (ISO)

perfluorooctanoic acid (ISO)

phenylmercury acetate (ISO)

quercetin (ISO)

rotenone (ISO)

SB 431542 (ISO)

sodium arsenite (EXP,ISO)

tetraphene (ISO)

thiabendazole (EXP)

thioacetamide (EXP)

titanium dioxide (ISO)

trichloroethene (EXP)

trichostatin A (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

alternative mRNA splicing, via spliceosome (IBA,ISO)

androgen receptor signaling pathway (ISO)

BMP signaling pathway (ISO)

circadian rhythm (ISO)

epithelial to mesenchymal transition (ISO)

intracellular estrogen receptor signaling pathway (ISO)

intrinsic apoptotic signaling pathway by p53 class mediator (ISO)

miRNA transcription (ISO)

mRNA transcription (ISO)

myoblast differentiation (ISO)

negative regulation of transcription by RNA polymerase II (ISO)

nuclear-transcribed mRNA catabolic process (ISO)

positive regulation of DNA damage response, signal transduction by p53 class mediator (ISO)

positive regulation of DNA-templated transcription (ISO)

primary miRNA processing (ISO)

protein import into nucleus (ISO)

regulation of alternative mRNA splicing, via spliceosome (ISO)

regulation of androgen receptor signaling pathway (ISO)

regulation of miRNA transcription (ISO)

regulation of osteoblast differentiation (ISO)

regulation of skeletal muscle cell differentiation (ISO)

regulation of transcription by RNA polymerase II (ISO)

regulation of viral genome replication (IMP)

Cellular Component

catalytic step 2 spliceosome (ISO)

cytoplasm (IBA)

nuclear speck (ISO)

nucleolus (ISO)

nucleoplasm (ISO)

nucleus (IBA,ISO)

ribonucleoprotein complex (IBA,ISO)

Molecular Function

ATP binding (IEA)

calcium-dependent protein binding (IDA)

calmodulin binding (IDA)

enzyme binding (IDA)

hydrolase activity (IEA)

MH2 domain binding (ISO)

mRNA 3'-UTR binding (IBA,ISO)

nuclear androgen receptor binding (ISO)

pre-mRNA binding (ISO)

primary miRNA binding (ISO)

promoter-specific chromatin binding (ISO)

protein binding (IPI,ISO)

R-SMAD binding (ISO)

ribonucleoprotein complex binding (IBA,ISO)

RNA binding (ISO)

RNA helicase activity (IBA,IDA,ISO)

SMAD binding (ISO)

transcription coregulator activity (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

estrogen signaling pathway (ISO)

spliceosome pathway (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Regulation of p68 RNA helicase by calmodulin and protein kinase C.	Buelt MK, etal., J Biol Chem. 1994 Nov 25;269(47):29367-70.
2.	Interaction between SARS-CoV helicase and a multifunctional cellular protein (Ddx5) revealed by yeast and mammalian cell two-hybrid systems.	Chen JY, etal., Arch Virol. 2009;154(3):507-12. Epub 2009 Feb 18.
3.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4.	Coregulators in nuclear estrogen receptor action: from concept to therapeutic targeting.	Hall JM and McDonnell DP, Mol Interv. 2005 Dec;5(6):343-57.
5.	p68 (Ddx5) interacts with Runx2 and regulates osteoblast differentiation.	Jensen ED, etal., J Cell Biochem. 2008 Apr 1;103(5):1438-51.
6.	High-level expression in male germ cells of murine P68 RNA helicase mRNA.	Lemaire L and Heinlein UA, Life Sci 1993;52(11):917-26.
7.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
8.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
9.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
10.	GOA pipeline	RGD automated data pipeline
11.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
12.	Overexpression of RNA helicase p68 protein in cutaneous squamous cell carcinoma.	Wang SJ, etal., Clin Exp Dermatol. 2012 Dec;37(8):882-8. doi: 10.1111/j.1365-2230.2012.04365.x. Epub 2012 Apr 30.

Additional References at PubMed

PMID:10837141	PMID:11991638	PMID:12477932	PMID:15298701	PMID:15464984	PMID:15660129	PMID:16791210	PMID:17011493	PMID:18548003	PMID:18809582	PMID:18829551	PMID:19056867
PMID:19946888	PMID:21343338	PMID:21700703	PMID:22082260	PMID:22658674	PMID:22665494	PMID:22681889	PMID:22767893	PMID:23022728	PMID:23143267	PMID:23788676	PMID:23979707
PMID:24275493	PMID:24625528	PMID:24910439	PMID:26627310	PMID:28165114	PMID:29221657

Genomics

Comparative Map Data

Ddx5
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	10	91,723,508 - 91,732,210 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	91,723,508 - 91,732,283 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	96,780,226 - 96,788,079 (-)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	10	96,243,401 - 96,251,254 (-)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	10	91,646,778 - 91,654,178 (-)	NCBI	Rnor_WKY
Rnor_6.0	10	94,979,759 - 94,988,461 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	94,980,928 - 94,988,461 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	94,726,626 - 94,734,161 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	96,131,888 - 96,139,423 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	96,150,818 - 96,151,721 (-)	NCBI
Celera	10	90,391,099 - 90,398,634 (-)	NCBI		Celera
Cytogenetic Map	10	q32.1	NCBI

DDX5
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	64,498,254 - 64,506,866 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p13 Ensembl	17	64,498,254 - 64,508,199 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	62,494,372 - 62,502,984 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	59,926,200 - 59,932,869 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	17	59,926,199 - 59,932,869	NCBI
Celera	17	56,964,516 - 56,972,623 (-)	NCBI		Celera
Cytogenetic Map	17	q23.3	NCBI
HuRef	17	57,943,439 - 57,951,549 (-)	NCBI		HuRef
CHM1_1	17	62,558,298 - 62,566,409 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	17	65,368,010 - 65,376,622 (-)	NCBI		T2T-CHM13v2.0

Ddx5
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	106,671,181 - 106,680,011 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	106,671,181 - 106,680,011 (-)	Ensembl		GRCm39 Ensembl
GRCm38	11	106,780,355 - 106,789,185 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	106,780,355 - 106,789,185 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	106,641,670 - 106,649,808 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	106,596,446 - 106,604,584 (-)	NCBI		MGSCv36	mm8
Celera	11	118,511,567 - 118,519,713 (-)	NCBI		Celera
Cytogenetic Map	11	E1	NCBI
cM Map	11	70.01	NCBI

Ddx5
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955478	7,366,956 - 7,376,358 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955478	7,367,049 - 7,375,043 (+)	NCBI	ChiLan1.0	ChiLan1.0

DDX5
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1	17	85,505,931 - 85,512,527 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	58,594,956 - 58,603,570 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	63,689,078 - 63,696,493 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	63,689,082 - 63,696,142 (-)	Ensembl	panpan1.1		panPan2

DDX5
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	12,300,706 - 12,307,931 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	12,300,708 - 12,307,663 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	13,196,543 - 13,203,768 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	13,963,241 - 13,970,476 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	13,961,935 - 13,970,612 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	12,909,346 - 12,916,580 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	14,616,274 - 14,623,500 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	14,617,448 - 14,624,682 (+)	NCBI		UU_Cfam_GSD_1.0

Ddx5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	14,180,934 - 14,189,387 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936541	5,004,692 - 5,013,350 (-)	Ensembl	SpeTri2.0
SpeTri2.0	NW_004936541	5,005,211 - 5,013,439 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

DDX5
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	14,571,951 - 14,580,742 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	14,571,712 - 14,580,740 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

DDX5
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	56,766,669 - 56,773,767 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	56,767,186 - 56,773,464 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666077	27,374,672 - 27,381,917 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ddx5
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624870	204,671 - 214,156 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624870	206,714 - 214,264 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Ddx5
40 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	211
Count of miRNA genes:	149
Interacting mature miRNAs:	166
Transcripts:	ENSRNOT00000048490
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
61427	Cia16	Collagen induced arthritis QTL 16	3.2		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	6357896	96121100	Rat
2303118	Mamtr7	Mammary tumor resistance QTL 7		0.003	mammary gland integrity trait (VT:0010552)	mammary tumor growth rate (CMO:0000344)	10	9658275	104670812	Rat
631268	Cia21	Collagen induced arthritis QTL 21	3.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	14487011	104060283	Rat
2316949	Gluco60	Glucose level QTL 60	3.7		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	10	14487011	107057807	Rat
1554317	Bmd4	Bone mineral density QTL 4	9.4	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	10	19816042	99406971	Rat
61354	Pia10	Pristane induced arthritis QTL 10		0.01	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23444813	104060283	Rat
631267	Cia20	Collagen induced arthritis QTL 20	3.2		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23444813	104060283	Rat
61325	Aia5	Adjuvant induced arthritis QTL 5		0.01	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23444813	104060283	Rat
1298069	Bp168	Blood pressure QTL 168	5.5		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	10	26521957	98003205	Rat
631542	Bp82	Blood pressure QTL 82	6.8		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	26521957	98952741	Rat
1331791	Cm31	Cardiac mass QTL 31	3.84606		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	10	29299504	107211142	Rat
1576308	Schws1	Schwannoma susceptibility QTL 1		0.0041	nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	10	40035094	102359817	Rat
631269	Cia22	Collagen induced arthritis QTL 22	8.9		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	40035094	104060283	Rat
631270	Cia23	Collagen induced arthritis QTL 23	3.9		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	40035094	104060283	Rat
1298078	Stresp5	Stress response QTL 5	2.99	0.00025	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	10	42045676	104670812	Rat
2300218	Hpcl2	Hepatic cholesterol level QTL 2			liver cholesterol amount (VT:0010498)	liver cholesterol level (CMO:0001597)	10	45029650	95600334	Rat
631547	Bp87	Blood pressure QTL 87	4.5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	47369470	92369470	Rat
1549846	Scl47	Serum cholesterol level QTL 47	3.6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	10	50574707	95574707	Rat
70364	Bp72	Blood pressure QTL 72			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	51121100	96121100	Rat
61387	Bp1	Blood pressure QTL 1	5.1		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	51770177	107211142	Rat
61387	Bp1	Blood pressure QTL 1	5.1		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	10	51770177	107211142	Rat
1359017	Hrtrt21	Heart rate QTL 21	2.4		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	10	51772940	96772940	Rat
631530	Tls3	T-lymphoma susceptibility QTL 3	0	0.0001	thymus integrity trait (VT:0010555)	percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)	10	51774612	95600334	Rat
70171	Cari1	Carrageenan-induced inflammation QTL 1	4.9	0.0005	hypodermis integrity trait (VT:0010550)	inflammatory exudate volume (CMO:0001429)	10	53797385	107211142	Rat
70164	Bw21	Body weight QTL 21	4.36	0.00005	body mass (VT:0001259)	body weight (CMO:0000012)	10	53797494	98952626	Rat
1354608	Cm33	Cardiac mass QTL 33	2.8		heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	10	54809292	99809292	Rat
2312662	Slep8	Serum leptin concentration QTL 8		0.05	blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	10	57134272	102134272	Rat
2312668	Scl65	Serum cholesterol level QTL 65		0.001	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	10	57134272	102134272	Rat
2312672	Insul15	Insulin level QTL 15		0.01	blood insulin amount (VT:0001560)	serum insulin level (CMO:0000358)	10	57134272	102134272	Rat
1549831	Bss6	Bone structure and strength QTL 6	4		lumbar vertebra strength trait (VT:0010574)	vertebra ultimate force (CMO:0001678)	10	57576521	102576521	Rat
2293698	Bss43	Bone structure and strength QTL 43	5.33	0.0001	lumbar vertebra size trait (VT:0010518)	lumbar vertebra cross-sectional area (CMO:0001689)	10	59209888	104209888	Rat
2306970	Anxrr22	Anxiety related response QTL 22	5.95		fear/anxiety-related behavior trait (VT:1000241)	number of periods of voluntary immobility (CMO:0001045)	10	61345276	98211570	Rat
6893336	Cm75	Cardiac mass QTL 75	0.1	0.87	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	10	61345276	99703528	Rat
1558643	Cm44	Cardiac mass QTL 44	4.8	0.0000368	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	10	61345276	99703528	Rat
2313103	Bss80	Bone structure and strength QTL 80	2	0.0001	tibia strength trait (VT:1000284)	tibia midshaft endosteal cross-sectional area (CMO:0001716)	10	62057807	107057807	Rat
2313105	Bss79	Bone structure and strength QTL 79	1.8	0.0001	tibia size trait (VT:0100001)	tibia midshaft cross-sectional area (CMO:0001717)	10	62057807	107057807	Rat
61449	Ciaa2	CIA Autoantibody QTL 2	7.1		blood autoantibody amount (VT:0003725)	calculated serum anti-type 2 collagen antibody titer (CMO:0001279)	10	63221094	107211142	Rat
1357344	Bp249	Blood pressure QTL 249		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	66743655	98003205	Rat
2317029	Aia19	Adjuvant induced arthritis QTL 19	2.98		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	10	66978955	107211142	Rat
2317039	Aia6	Adjuvant induced arthritis QTL 6	4.31		joint integrity trait (VT:0010548)	right rear ankle joint diameter (CMO:0002150)	10	66978955	107211142	Rat
10450498	Bp384	Blood pressure QTL 384		0.002	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	67750049	107211142	Rat
1642980	Bp300	Blood pressure QTL 300			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	68383129	107211142	Rat
61396	Bp9	Blood pressure QTL 9	4.8	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	68420376	107211142	Rat
2300172	Bmd57	Bone mineral density QTL 57	9.8	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	10	69738412	107211142	Rat
2293646	Bss25	Bone structure and strength QTL 25	10.96	0.0001	femur morphology trait (VT:0000559)	femur cross-sectional area (CMO:0001661)	10	69738412	107211142	Rat
2293663	Bss33	Bone structure and strength QTL 33	9.34	0.0001	femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	10	69738412	107211142	Rat
6893366	Bw106	Body weight QTL 106	0.3	0.47	body mass (VT:0001259)	body weight (CMO:0000012)	10	70199100	107211142	Rat
70193	Mcs7	Mammary carcinoma susceptibility QTL 7	2.38		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	10	72224939	107211142	Rat
2298548	Neuinf7	Neuroinflammation QTL 7	3.4		nervous system integrity trait (VT:0010566)	spinal cord RT1-B protein level (CMO:0002132)	10	72224939	107211142	Rat
2306793	Ean5	Experimental allergic neuritis QTL 5	4.7		nervous system integrity trait (VT:0010566)	IFNG-secreting splenocyte count (CMO:0002122)	10	72552416	93995749	Rat
1358188	Ept9	Estrogen-induced pituitary tumorigenesis QTL 9	3.9		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	10	73453136	96120911	Rat
2292617	Ept18	Estrogen-induced pituitary tumorigenesis QTL 18	3.9		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	10	73453136	96120911	Rat
1579919	Bp281	Blood pressure QTL 281		0.01	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	74372084	94965338	Rat
10450495	Bp383	Blood pressure QTL 383		0.002	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	76246085	94965338	Rat
2292438	Bp311	Blood pressure QTL 311			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	76246085	107211142	Rat
1302404	Cia27	Collagen induced arthritis QTL 27	2.6	0.0045	joint integrity trait (VT:0010548)	experimental arthritis severity measurement (CMO:0001459)	10	76452683	107211142	Rat
4889492	Pancm2	Pancreatic morphology QTL 2	3.2		pancreatic beta cell morphology trait (VT:0005217)	ratio of insulin-positive cell area to total area of splenic region of pancreas (CMO:0001814)	10	76748906	107211142	Rat
1300107	Rf18	Renal function QTL 18	3.41		urine output (VT:0003620)	timed urine volume (CMO:0000260)	10	78775516	98279596	Rat
6893357	Bw102	Body weight QTL 102	0.5	0.36	body mass (VT:0001259)	body weight (CMO:0000012)	10	80515287	101325465	Rat
2303589	Bw87	Body weight QTL 87	2		body mass (VT:0001259)	body weight (CMO:0000012)	10	81285008	107211142	Rat
4889948	Bss91	Bone structure and strength QTL 91	4		tibia area (VT:1000281)	tibia midshaft total cross-sectional area (CMO:0001715)	10	82564856	92369470	Rat
2317754	Glom25	Glomerulus QTL 25	3.5		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	10	82685200	107211142	Rat
12880055	Am11	Aortic mass QTL 11		0.004	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	10	84007272	95933025	Rat
2301398	Kidm38	Kidney mass QTL 38		0.002	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	10	84007272	95933025	Rat
2306792	Ean4	Experimental allergic neuritis QTL 4	4		nervous system integrity trait (VT:0010566)	IFNG-secreting splenocyte count (CMO:0002122)	10	84022321	93995963	Rat
1600367	Mcs15	Mammary carcinoma susceptibility QTL 15	4.5		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	10	85565469	103884409	Rat
631538	Oia5	Oil induced arthritis QTL 5			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	87055121	107211142	Rat
2313856	Bp342	Blood pressure QTL 342	4.4	0.0001	life span trait (VT:0005372)	age at time of death (CMO:0001193)	10	87307617	96121100	Rat
61363	Oia3	Oil induced arthritis QTL 3		0.001	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	87307617	107211142	Rat
634320	Niddm49	Non-insulin dependent diabetes mellitus QTL 49	4.41		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	10	88539139	107211142	Rat
12880395	Cm109	Cardiac mass QTL 109		0.001	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	10	90404397	107211142	Rat
12880396	Am13	Aortic mass QTL 13		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	10	90404397	107211142	Rat
12880398	Kidm67	Kidney mass QTL 67		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	10	90404397	107211142	Rat
12880384	Cm107	Cardiac mass QTL 107		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)		90404397	107211142	Rat
12880385	Cm108	Cardiac mass QTL 108		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)		90404397	107211142	Rat
1579915	Bp280	Blood pressure QTL 280		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	90404397	107211142	Rat
1300137	Bp186	Blood pressure QTL 186	3.57		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	10	90627439	107057807	Rat
724530	Bp149	Blood pressure QTL 149		0.0001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	90627439	107211142	Rat
1558652	Bw57	Body weight QTL 57	4.2	0.0008	body mass (VT:0001259)	body weight (CMO:0000012)	10	90910316	107211142	Rat
61436	Cia5	Collagen induced arthritis QTL 5	4.9		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	91228102	104060283	Rat

Markers in Region

RH142936

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	91,733,410 - 91,733,645 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	94,989,662 - 94,989,896	NCBI	Rnor6.0
Rnor_5.0	10	94,735,362 - 94,735,596	UniSTS	Rnor5.0
RGSC_v3.4	10	96,140,624 - 96,140,858	UniSTS	RGSC3.4
Celera	10	90,399,835 - 90,400,069	UniSTS
RH 3.4 Map	10	987.8	UniSTS
Cytogenetic Map	10	q32.1	UniSTS

DDX5

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	91,726,903 - 91,727,067 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	94,983,155 - 94,983,318	NCBI	Rnor6.0
Rnor_5.0	10	94,728,855 - 94,729,018	UniSTS	Rnor5.0
RGSC_v3.4	10	96,134,117 - 96,134,280	UniSTS	RGSC3.4
Celera	10	90,393,328 - 90,393,491	UniSTS
Cytogenetic Map	10	q32.1	UniSTS

AA858847

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	91,724,982 - 91,725,176 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	94,981,234 - 94,981,427	NCBI	Rnor6.0
Rnor_5.0	10	94,726,934 - 94,727,127	UniSTS	Rnor5.0
RGSC_v3.4	10	96,132,196 - 96,132,389	UniSTS	RGSC3.4
Celera	10	90,391,407 - 90,391,600	UniSTS
RH 3.4 Map	10	987.5	UniSTS
Cytogenetic Map	10	q32.1	UniSTS

PMC102575P1

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	91,725,197 - 91,725,767 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	94,981,449 - 94,982,018	NCBI	Rnor6.0
Rnor_5.0	10	94,727,149 - 94,727,718	UniSTS	Rnor5.0
RGSC_v3.4	10	96,132,411 - 96,132,980	UniSTS	RGSC3.4
Celera	10	90,391,622 - 90,392,191	UniSTS
Cytogenetic Map	10	q32.1	UniSTS

D17S1990

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	91,724,682 - 91,724,960 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	94,980,934 - 94,981,211	NCBI	Rnor6.0
Rnor_5.0	10	94,726,634 - 94,726,911	UniSTS	Rnor5.0
RGSC_v3.4	10	96,131,896 - 96,132,173	UniSTS	RGSC3.4
Celera	10	90,391,107 - 90,391,384	UniSTS
Cytogenetic Map	10	q32.1	UniSTS

Ddx5

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	17	55,245,495 - 55,246,484 (-)	MAPPER	mRatBN7.2
Rnor_6.0	17	60,446,538 - 60,447,526	NCBI	Rnor6.0
Rnor_5.0	17	62,229,397 - 62,230,385	UniSTS	Rnor5.0
Cytogenetic Map	17	q12.1	UniSTS
Cytogenetic Map	10	q32.1	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High			3		3				34	2	9	2
Medium	3	43	54	41	16	41	8	11	40	33	32	9	8
Low
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001007613	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008768313	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039085631	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AJ010934	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC079036	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473948	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FJ168767	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ212250	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ217246	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ227563	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000220	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSRNOT00000048490 ⟹ ENSRNOP00000041663

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	10	91,724,679 - 91,732,283 (-)	Ensembl
Rnor_6.0 Ensembl	10	94,980,928 - 94,988,461 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000098583 ⟹ ENSRNOP00000078427

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	10	91,723,508 - 91,731,082 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000103418 ⟹ ENSRNOP00000084029

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	10	91,723,516 - 91,731,617 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000116552 ⟹ ENSRNOP00000079189

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	10	91,724,679 - 91,731,617 (-)	Ensembl

RefSeq Acc Id:

NM_001007613 ⟹ NP_001007614

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	10	91,724,675 - 91,732,210 (-)	NCBI
Rnor_6.0	10	94,980,926 - 94,988,461 (-)	NCBI
Rnor_5.0	10	94,726,626 - 94,734,161 (-)	NCBI
RGSC_v3.4	10	96,131,888 - 96,139,423 (-)	RGD
Celera	10	90,391,099 - 90,398,634 (-)	RGD

Sequence:

show sequence

CGCTTAAGGGCTCTCAGATCGGCGTGCAGGGCAGCCAGGTCACCCAGCAGCCCGGCCGATCTCC
TGGGGGCGTTAGAGCCGCGCTTCCGCTCCGGCCCTCGTCACCGCCGTCCCTCCGCTGGTGACGC
CCCCGCAAAGGCTTCGCCGTCGCCGAGGCCTCCTTTCAGCGACTCGTCGCAACTGGATTCTCTT
TCACTGGGTTCCTCCAGCACACCGCAACCATTGACGCCATGTCGAGTTATTCTAGTGACCGAGA
CCGCGGCCGGGATCGAGGGTTTGGTGCACCTCGATTTGGAGGGAGTAGAACAGGACCCCTATCT
GGAAAGAAGTTTGGAAATCCTGGGGAGAAACTAGTTAAAAAGAAGTGGAATCTTGATGAGCTGC
CCAAATTTGAGAAGAATTTTTATCAGGAACACCCTGATTTGGCAAGGCGCACCGCACAAGAGGT
AGATACGTACAGAAGAAGCAAGGAAATTACAGTCAGAGGTCACAACTGTCCAAAACCTGTTCTG
AATTTTTATGAAGCAAACTTTCCTGCAAATGTCATGGATGTGATTGCAAGGCAGAACTTCACTG
AACCCACTGCTATCCAAGCTCAGGGCTGGCCAGTTGCTCTCAGTGGATTGGATATGGTTGGAGT
AGCTCAGACTGGATCTGGGAAAACATTATCTTATTTGCTGCCTGCCATTGTACACATAAACCAC
CAGCCATTCTTAGAGAGAGGTGATGGGCCTATTTGCTTGGTGCTGGCACCAACTCGAGAACTGG
CACAGCAGGTGCAGCAGGTCGCTGCTGAATATTGTAGAGCTTGTCGCTTGAAGTCTACTTGCAT
CTATGGTGGTGCTCCCAAAGGACCGCAGATTCGTGATTTGGAGAGAGGTGTGGAAATCTGTATT
GCAACACCTGGAAGACTGATTGACTTTTTAGAGTGTGGGAAAACCAATCTGAGAAGAACAACTT
ACCTTGTCCTTGATGAAGCTGATAGGATGCTTGATATGGGCTTTGAACCCCAAATAAGGAAAAT
TGTGGATCAAATAAGACCTGATAGGCAAACACTAATGTGGAGTGCAACTTGGCCAAAAGAAGTA
AGACAGCTTGCTGAAGATTTCCTGAAAGACTATATTCATATCAATATTGGTGCACTGGAACTGA
GTGCAAACCATAACATTCTTCAGATTGTGGATGTGTGTCATGATGTCGAAAAGGATGAAAAACT
TATTCGTCTGATGGAAGAGATCATGAGTGAGAAGGAGAATAAAACCATTGTTTTTGTTGAAACC
AAAAGAAGATGTGATGAACTTACCAGAAAAATGAGGAGAGATGGGTGGCCTGCCATGGGCATCC
ATGGTGACAAGAGTCAACAGGAACGAGACTGGGTTCTAAATGAATTCAAACATGGAAAAGCTCC
TATTCTGATTGCTACCGATGTGGCCTCCAGAGGGCTAGATGTGGAAGATGTGAAATTTGTCATC
AATTATGACTACCCTAACTCCTCAGAGGATTATATTCATCGAATTGGAAGAACTGCTCGCAGTA
CCAAAACAGGCACAGCATACACTTTCTTTACTCCCAATAACATAAAGCAAGTGAGCGACCTCAT
CTCTGTGCTTCGGGAAGCCAATCAAGCAATTAATCCCAAGTTGCTTCAGTTGGTCGAAGACAGA
GGTTCAGGTCGTTCCAGGGGTAGAGGAGGCATGAAGGATGATCGTCGTGACAGATACTCTGCAG
GGAAAAGGGGTGGATTTAATACCTTTAGAGACAGGGAAAACTATGACAGAGGCTACTCTAGTCT
GCTTAAGAGAGATTTTGGGGCTAAAACTCAGAATGGTGTTTACAGTGCTGCAAATTACACCAAT
GGGAGCTTTGGAAGTAATTTTGTATCTGCTGGCATACAGACCAGTTTTAGGACTGGTAACCCAA
CAGGGACTTACCAGAACGGTTATGATAGCACTCAGCAATATGGAAGTAATGTTGCAAATATGCA
CAATGGGATGAACCAACAGGCATATGCATATCCTGCTACCGCAGCTGCTGCGCCTATGATTGGC
TATCCAATGCCAACAGGGTATTCTCAATAAGACTTTAGAAGTATATGTAAATGTCTGTTTTTCA
TAATTGCTCTTTATATTGTGTGTTATCAGACAAGATAGTTATTTAAGAAACATGGGAAATGCAG
AAATGACTGCAGTGCAGCAGTAATTATGGTGCACTTTTTTCGCTATTTAAGTTGGATATTTCTC
TACATTCCTGAAACAATTTTTAGGTTTTTTTTGTACTAGAAAATGCAGGCAGTGTTTTCACAAA
AGTAACTGTACAGTGATTTCAAATACAATAAATGAAGGCAATGCATGGCCTTCCAATAAAAGAT
ATTTGAAGACTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_008768313 ⟹ XP_008766535

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	10	91,723,508 - 91,732,015 (-)	NCBI
Rnor_6.0	10	94,979,759 - 94,988,219 (-)	NCBI

Sequence:

show sequence

CTTCAAGTAGAGACAGTAGGATGGCTGGTGCTGGCCATTTTAATGACTGGTTGGCCACGGGGAA
GAAGCTTGTTTGACATGTAGCAAGGCGAGAAGCTCCGGCCCTCGTCACCGCCGTCCCTCCGCTG
GTGACGCCCCCGCAAAGGCTTCGCCGTCGCCGAGGCCTCCTTTCAGCGACTCGTCGCAACTGGA
TTCTCTTTCACTGGGTTCCTCCAGCACACCGCAACCATTGACGCCATGTCGAGTTATTCTAGTG
ACCGAGACCGCGGCCGGGATCGAGGGTTTGGTGCACCTCGATTTGGAGGGAGTAGAACAGGACC
CCTATCTGGAAAGAAGTTTGGAAATCCTGGGGAGAAACTAGTTAAAAAGAAGTGGAATCTTGAT
GAGCTGCCCAAATTTGAGAAGAATTTTTATCAGGAACACCCTGATTTGGCAAGGCGCACCGCAC
AAGAGGTAGATACGTACAGAAGAAGCAAGGAAATTACAGTCAGAGGTCACAACTGTCCAAAACC
TGTTCTGAATTTTTATGAAGCAAACTTTCCTGCAAATGTCATGGATGTGATTGCAAGGCAGAAC
TTCACTGAACCCACTGCTATCCAAGCTCAGGGCTGGCCAGTTGCTCTCAGTGGATTGGATATGG
TTGGAGTAGCTCAGACTGGATCTGGGAAAACATTATCTTATTTGCTGCCTGCCATTGTACACAT
AAACCACCAGCCATTCTTAGAGAGAGGTGATGGGCCTATTTGCTTGGTGCTGGCACCAACTCGA
GAACTGGCACAGCAGGTGCAGCAGGTCGCTGCTGAATATTGTAGAGCTTGTCGCTTGAAGTCTA
CTTGCATCTATGGTGGTGCTCCCAAAGGACCGCAGATTCGTGATTTGGAGAGAGGTGTGGAAAT
CTGTATTGCAACACCTGGAAGACTGATTGACTTTTTAGAGTGTGGGAAAACCAATCTGAGAAGA
ACAACTTACCTTGTCCTTGATGAAGCTGATAGGATGCTTGATATGGGCTTTGAACCCCAAATAA
GGAAAATTGTGGATCAAATAAGACCTGATAGGCAAACACTAATGTGGAGTGCAACTTGGCCAAA
AGAAGTAAGACAGCTTGCTGAAGATTTCCTGAAAGACTATATTCATATCAATATTGGTGCACTG
GAACTGAGTGCAAACCATAACATTCTTCAGATTGTGGATGTGTGTCATGATGTCGAAAAGGATG
AAAAACTTATTCGTCTGATGGAAGAGATCATGAGTGAGAAGGAGAATAAAACCATTGTTTTTGT
TGAAACCAAAAGAAGATGTGATGAACTTACCAGAAAAATGAGGAGAGATGGGTGGCCTGCCATG
GGCATCCATGGTGACAAGAGTCAACAGGAACGAGACTGGGTTCTAAATGAATTCAAACATGGAA
AAGCTCCTATTCTGATTGCTACCGATGTGGCCTCCAGAGGGCTAGATGTGGAAGATGTGAAATT
TGTCATCAATTATGACTACCCTAACTCCTCAGAGGATTATATTCATCGAATTGGAAGAACTGCT
CGCAGTACCAAAACAGGCACAGCATACACTTTCTTTACTCCCAATAACATAAAGCAAGTGAGCG
ACCTCATCTCTGTGCTTCGGGAAGCCAATCAAGCAATTAATCCCAAGTTGCTTCAGTTGGTCGA
AGACAGAGGTTCAGGTCGTTCCAGGGGTAGAGGAGGCATGAAGGATGATCGTCGTGACAGATAC
TCTGCAGGGAAAAGGGGTGGATTTAATACCTTTAGAGACAGGGAAAACTATGACAGAGGCTACT
CTAGTCTGCTTAAGAGAGATTTTGGGGCTAAAACTCAGAATGGTGTTTACAGTGCTGCAAATTA
CACCAATGGGAGCTTTGGAAGTAATTTTGTATCTGCTGGCATACAGACCAGTTTTAGGACTGGT
AACCCAACAGGGACTTACCAGAACGGTTATGATAGCACTCAGCAATATGGAAGTAATGTTGCAA
ATATGCACAATGGGATGAACCAACAGGCATATGCATATCCTGCTACCGCAGCTGCTGCGCCTAT
GATTGGCTATCCAATGCCAACAGGGTATTCTCAATAAGACTTTAGAAGTATATGTAAATGTCTG
TTTTTCATAATTGCTCTTTATATTGTGTGTTATCAGACAAGATAGTTATTTAAGAAACATGGGA
AATGCAGAAATGACTGCAGTGCAGCAGTAATTATGGTGCACTTTTTTCGCTATTTAAGTTGGAT
ATTTCTCTACATTCCTGAAACAATTTTTAGGTTTTTTTTGTACTAGAAAATGCAGGCAGTGTTT
TCACAAAAGTAACTGTACAGTGATTTCAAATACAATAAATGAAGGCAATGCATGGCCTTCCAAT
AAAAGATATTTGAAGACTGAATTAAGTGGAAATTGTACTTTATTTTACATATATAATGTCATGT
AAAACTTGGCTTAGATAGTATGTTTTTGGGGGGATTTTTGTTTTGGTGTTTATTTTTACACAAC
TAAAGTTGACTACTTCCCATTCCTTGGTTTAGGAGAGGAACTCAGAAGGCCCTTTGTATGGGAA
GAATTTAGAAACAATGGATTTTATAATTCTAGATTAATTGCATAAGAAGCTTTGTCAGTAGTTT
TCAGTATCAGGGAAGTAAGTCGTTTAATAGCCTATTTTCCTTAAGAGTGAGCTACAGGACAGGA
ACTGTATATAAGTAACATGGTGACTCTTGCAGAAGTTTTAAGTGGACATTTTGCTTTATCAAAT
TTATTCCATCTCTTGGCTTTATTGTCAACTGCCAAAATGCACAAAGCTGAAAGACTGTTAGCCC
AAGAGCTGTGCACTGTGTCCTTAGTGCAGGTTACCTTGTATTTCTAGTCCTAGCAGACTTGCCA
GAGTGCTTATAGCCATTTCTGGAAGTCAGGAATGTCTTGAAACTGTAGGGTAGTCACAAGGAAG
GAAACCTCCAAATTAACCATTAGTCAGGCAACATACCCAAAAGCACAGTAAGGAGTTTTTCAGG
TTAGGTTCAACATGGGCTTACAGCTAGAAGGATGGGAAAGCTTTAGATTTACGTAAGTTCACCA
ACTAACAGCTTTATTTCAGAATAGCTAGAAGGAGGTCTAAATGTCTTCCCAGAAAACTGTGGTT
TTGCCCAGAACAAAAGTCTTAAAGGAAGTTCGTTTAATTTTTTTTTTAAATGGGCTTTATTGTT
AATGCCTTATTTATAAAATGTTAAAACAAATTAGAATGTGCTGGGGGTGGGAGCTGGGCGTGTT
TTCCAGGGCTGATAACATTGAAAACTGGTTCATCTTCTAGTACTCGAGTGGTTTTCAATGGCAT
GGCTAGTCAAATTCATGATTTTTAAGTATAGGTGTAGATTGGAGCATTTATTACATATTTTACT
GTTCAATGTCTTAATGTGGACCTTTTATTTTGTAAATAATTATGGAAATGATTGTGGGGCTTGG
AAAAAAATACCTTTGAAGTTTTAAAAGACAGTCCACTTTTTAGCATGTGTTGTGTCCAGCCTGT
GGTCGTCTTAACTAATAAATGTGATTTTTCTCCCCA

hide sequence

RefSeq Acc Id:

XM_039085631 ⟹ XP_038941559

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	10	91,723,508 - 91,731,660 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001007614	(Get FASTA)	NCBI Sequence Viewer
	XP_008766535	(Get FASTA)	NCBI Sequence Viewer
	XP_038941559	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH79036	(Get FASTA)	NCBI Sequence Viewer
	ACI04543	(Get FASTA)	NCBI Sequence Viewer
	CAA09411	(Get FASTA)	NCBI Sequence Viewer
	EDM06412	(Get FASTA)	NCBI Sequence Viewer
	EDM06413	(Get FASTA)	NCBI Sequence Viewer
	EDM06414	(Get FASTA)	NCBI Sequence Viewer
	EDM06415	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

NP_001007614 ⟸ NM_001007613

- UniProtKB:

Q6AYI1 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSSYSSDRDRGRDRGFGAPRFGGSRTGPLSGKKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPD
LARRTAQEVDTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVA
LSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCR
ACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDM
GFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVC
HDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVL
NEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPN
NIKQVSDLISVLREANQAINPKLLQLVEDRGSGRSRGRGGMKDDRRDRYSAGKRGGFNTFRDRE
NYDRGYSSLLKRDFGAKTQNGVYSAANYTNGSFGSNFVSAGIQTSFRTGNPTGTYQNGYDSTQQ
YGSNVANMHNGMNQQAYAYPATAAAAPMIGYPMPTGYSQ

hide sequence

RefSeq Acc Id:	XP_008766535 ⟸ XM_008768313
- Peptide Label:	isoform X1
- UniProtKB:	Q6AYI1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSSYSSDRDRGRDRGFGAPRFGGSRTGPLSGKKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPD LARRTAQEVDTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVA LSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCR ACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDM GFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVC HDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVL NEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPN NIKQVSDLISVLREANQAINPKLLQLVEDRGSGRSRGRGGMKDDRRDRYSAGKRGGFNTFRDRE NYDRGYSSLLKRDFGAKTQNGVYSAANYTNGSFGSNFVSAGIQTSFRTGNPTGTYQNGYDSTQQ YGSNVANMHNGMNQQAYAYPATAAAAPMIGYPMPTGYSQ hide sequence

RefSeq Acc Id:

ENSRNOP00000041663 ⟸ ENSRNOT00000048490

RefSeq Acc Id:	XP_038941559 ⟸ XM_039085631
- Peptide Label:	isoform X1
- UniProtKB:	Q6AYI1 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSRNOP00000079189 ⟸ ENSRNOT00000116552

RefSeq Acc Id:

ENSRNOP00000078427 ⟸ ENSRNOT00000098583

RefSeq Acc Id:

ENSRNOP00000084029 ⟸ ENSRNOT00000103418

Protein Domains

DEAD-box RNA helicase Q Helicase ATP-binding Helicase C-terminal

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q6AYI1-F1-model_v2	AlphaFold	Q6AYI1	1-615	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13697847

Promoter ID:

EPDNEW_R8372

Type:

initiation region

Name:

Ddx5_1

Description:

DEAD-box helicase 5

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	10	94,988,484 - 94,988,544	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:619906	AgrOrtholog
BioCyc Gene	G2FUF-22927	BioCyc
Ensembl Genes	ENSRNOG00000030680	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSRNOP00000041663	ENTREZGENE
	ENSRNOP00000041663.2	UniProtKB/TrEMBL
	ENSRNOP00000078427.1	UniProtKB/TrEMBL
	ENSRNOP00000079189.1	UniProtKB/TrEMBL
	ENSRNOP00000084029	ENTREZGENE
	ENSRNOP00000084029.1	UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000048490	ENTREZGENE
	ENSRNOT00000048490.3	UniProtKB/TrEMBL
	ENSRNOT00000098583.1	UniProtKB/TrEMBL
	ENSRNOT00000103418	ENTREZGENE
	ENSRNOT00000103418.1	UniProtKB/TrEMBL
	ENSRNOT00000116552.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.300	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7114313	IMAGE-MGC_LOAD
InterPro	DNA/RNA_helicase_DEAD/DEAH_N	UniProtKB/TrEMBL
	Helicase_ATP-bd	UniProtKB/TrEMBL
	Helicase_C	UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/TrEMBL
	P68HR	UniProtKB/TrEMBL
	RNA-helicase_DEAD-box_CS	UniProtKB/TrEMBL
	RNA_helicase_DEAD_Q_motif	UniProtKB/TrEMBL
KEGG Report	rno:287765	UniProtKB/TrEMBL
MGC_CLONE	MGC:93965	IMAGE-MGC_LOAD
NCBI Gene	287765	ENTREZGENE
PANTHER	ATP-DEPENDENT RNA HELICASE DBP3	UniProtKB/TrEMBL
	ATP-DEPENDENT RNA HELICASE DDX5-RELATED	UniProtKB/TrEMBL
Pfam	DEAD	UniProtKB/TrEMBL
	Helicase_C	UniProtKB/TrEMBL
	P68HR	UniProtKB/TrEMBL
PhenoGen	Ddx5	PhenoGen
PROSITE	DEAD_ATP_HELICASE	UniProtKB/TrEMBL
	HELICASE_ATP_BIND_1	UniProtKB/TrEMBL
	HELICASE_CTER	UniProtKB/TrEMBL
	Q_MOTIF	UniProtKB/TrEMBL
SMART	DEXDc	UniProtKB/TrEMBL
	HELICc	UniProtKB/TrEMBL
	P68HR	UniProtKB/TrEMBL
Superfamily-SCOP	SSF52540	UniProtKB/TrEMBL
UniProt	A0A8I5ZKV9_RAT	UniProtKB/TrEMBL
	A0A8I5ZYB4_RAT	UniProtKB/TrEMBL
	A0A8I6G4Y3_RAT	UniProtKB/TrEMBL
	B6DTP5_RAT	UniProtKB/TrEMBL
	O88757_RAT	UniProtKB/TrEMBL
	Q6AYI1	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-01-13	Ddx5	DEAD-box helicase 5	Ddx5	DEAD (Asp-Glu-Ala-Asp) box helicase 5	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2012-07-16	Ddx5	DEAD (Asp-Glu-Ala-Asp) box helicase 5	Ddx5	DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-02-22	Ddx5	DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	Ddx5	ddx5 gene	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2002-08-07	Ddx5	ddx5 gene			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

RGD Manual Annotations

Imported Annotations - KEGG (archival)

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

RGD Manual Annotations

Imported Annotations - KEGG (archival)