Sv2c (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 2 | 28,967,631 - 29,163,168 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 2 | 27,232,933 - 27,428,479 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 2 | 27,232,933 - 27,428,477 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 2 | 34,272,667 - 34,465,181 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 2 | 32,372,766 - 32,565,287 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 2 | 27,188,759 - 27,389,783 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 2 | 26,495,757 - 26,707,691 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 2 | 26,501,833 - 26,699,333 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 2 | 45,631,737 - 45,828,663 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 2 | 26,326,862 - 26,555,019 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 2 | 26,247,230 - 26,475,388 (-) | NCBI | | | | | Celera | 2 | 23,293,289 - 23,483,743 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | q12 | NCBI | | | | |
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SV2C (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 5 | 75,847,464 - 76,353,939 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 5 | 76,083,383 - 76,353,939 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 5 | 75,379,208 - 75,649,764 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 5 | 75,415,061 - 75,657,172 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 5 | 75,526,658 - 75,661,645 | NCBI | | | | | Celera | 5 | 71,320,469 - 71,515,084 (+) | NCBI | | Celera | | | Cytogenetic Map | 5 | q13.3 | NCBI | | | | | HuRef | 5 | 70,632,037 - 70,829,092 (+) | NCBI | | HuRef | | | CHM1_1 | 5 | 74,860,605 - 75,054,059 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 5 | 76,328,570 - 76,835,704 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Sv2c (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 13 | 96,091,102 - 96,270,837 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 13 | 96,091,102 - 96,269,085 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 13 | 95,959,443 - 96,132,577 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 13 | 95,954,594 - 96,132,577 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 13 | 96,729,398 - 96,902,532 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 13 | 97,060,142 - 97,233,276 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 13 | 99,577,609 - 99,753,046 (-) | NCBI | | Celera | | | Cytogenetic Map | 13 | D1 | NCBI | | | | | cM Map | 13 | 50.47 | NCBI | | | | |
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Sv2c (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955425 | 24,496,434 - 24,683,179 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955425 | 24,489,304 - 24,682,555 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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SV2C (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 4 | 38,969,968 - 39,223,327 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 5 | 37,123,598 - 37,376,956 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 5 | 38,969,056 - 39,222,300 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 5 | 39,566,207 - 39,836,653 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 5 | 39,566,207 - 39,836,852 (-) | Ensembl | panpan1.1 | | panPan2 | |
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SV2C (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 3 | 30,232,892 - 30,440,046 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 3 | 30,232,710 - 30,440,327 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 3 | 31,469,780 - 31,678,170 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 3 | 30,156,170 - 30,363,724 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 3 | 30,156,894 - 30,363,969 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 3 | 30,087,278 - 30,241,695 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 3 | 30,066,666 - 30,270,719 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 3 | 30,437,678 - 30,645,896 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Sv2c (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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SV2C (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 2 | 84,996,716 - 85,236,130 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 2 | 84,996,697 - 85,235,827 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 2 | 86,622,023 - 86,679,582 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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SV2C (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 4 | 70,358,164 - 70,601,764 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 4 | 70,358,236 - 70,601,242 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666049 | 19,160,261 - 19,408,353 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Sv2c (Heterocephalus glaber - naked mole-rat) |
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