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Gene: Arhgef11 (Rho guanine nucleotide exchange factor 11) Rattus norvegicus

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Symbol:

Arhgef11

Name:

Rho guanine nucleotide exchange factor 11

RGD ID:

619705

Description:

Enables guanyl-nucleotide exchange factor activity. Involved in positive regulation of L-glutamate import across plasma membrane. Predicted to be located in nucleoplasm and plasma membrane. Predicted to be active in cytoplasm. Orthologous to human ARHGEF11 (Rho guanine nucleotide exchange factor 11); INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

glutamate transporter EAAT4 associated protein 48; Gtrap48; Rho guanine nucleotide exchange factor (GEF) 11; RhoGEF glutamate transport modulator GTRAP48

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Allele / Splice:

Arhgef11^em4Mcwi ; Arhgef11^em5Mcwi

Genetic Models:

SS-Arhgef11^em5Mcwi ; SS-Arhgef11^em4Mcwi

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	175,372,269 - 175,493,852 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	2	175,372,290 - 175,493,852 (+)	Ensembl				GRCr8
mRatBN7.2	2	173,074,383 - 173,195,962 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	173,074,368 - 173,196,010 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	2	180,224,015 - 180,343,253 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	178,246,357 - 178,365,598 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	172,835,607 - 172,955,106 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	186,979,850 - 187,102,523 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	186,980,793 - 187,101,768 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	2	206,384,799 - 206,507,431 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	2	179,676,236 - 179,796,785 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	2	167,024,592 - 167,144,568 (+)	NCBI		Celera
RGSC_v3.1	2	179,626,341 - 179,746,891 (+)	NCBI
Cytogenetic Map	2	q34	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

gastrointestinal stromal tumor (ISO)

parathyroid carcinoma (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-palmitoylglycerol (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

acrylamide (ISO)

amitrole (EXP)

ammonium chloride (EXP)

antirheumatic drug (ISO)

benzo[e]pyrene (ISO)

bisphenol A (EXP)

butanal (ISO)

C60 fullerene (EXP)

caffeine (ISO)

CGP 52608 (ISO)

coumarin (ISO)

crocidolite asbestos (ISO)

Dibutyl phosphate (ISO)

dicrotophos (ISO)

endosulfan (EXP)

fasudil (ISO)

fenthion (ISO)

folic acid (ISO)

FR900359 (ISO)

gentamycin (EXP)

lipopolysaccharide (EXP)

methapyrilene (ISO)

methidathion (ISO)

methimazole (EXP)

N,N-diethyl-m-toluamide (EXP)

N1'-[2-[[5-[(dimethylamino)methyl]-2-furanyl]methylthio]ethyl]-N1-methyl-2-nitroethene-1,1-diamine (EXP)

ozone (ISO)

paracetamol (EXP,ISO)

perfluorohexanesulfonic acid (ISO)

permethrin (EXP)

ranitidine (EXP)

sulfadimethoxine (EXP)

tacrolimus hydrate (ISO)

titanium dioxide (ISO)

triphenyl phosphate (ISO)

triptonide (ISO)

urethane (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

G protein-coupled receptor signaling pathway (IBA,IEA,ISO)

intracellular signal transduction (IEA)

positive regulation of DNA-templated transcription (IEA,ISO)

positive regulation of L-glutamate import across plasma membrane (IMP)

Rho protein signal transduction (IEA,ISO)

Cellular Component

cytoplasm (IBA,IEA,ISO)

membrane (IEA)

nucleoplasm (IEA,ISO)

plasma membrane (IEA,ISO)

Molecular Function

G protein-coupled receptor binding (IBA,IEA,ISO)

GTPase activator activity (IEA)

guanyl-nucleotide exchange factor activity (IBA,IDA,IEA)

protein binding (IPI,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Recognition of the activated states of Galpha13 by the rgRGS domain of PDZRhoGEF.	Chen Z, etal., Structure. 2008 Oct 8;16(10):1532-43. doi: 10.1016/j.str.2008.07.009.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
4.	Increased PDZ-RhoGEF/RhoA/Rho kinase signaling in small mesenteric arteries of angiotensin II-induced hypertensive rats.	Hilgers RH, etal., J Hypertens. 2007 Aug;25(8):1687-97.
5.	Modulation of the neuronal glutamate transporter EAAT4 by two interacting proteins.	Jackson M, etal., Nature 2001 Mar 1;410(6824):89-93.
6.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
7.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
8.	GOA pipeline	RGD automated data pipeline
9.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
10.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:10026210	PMID:15755723	PMID:18226120	PMID:20739613	PMID:22987919	PMID:23696743	PMID:24106280	PMID:26172442	PMID:31612150	PMID:32148127

Genomics

Comparative Map Data

Arhgef11
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	175,372,269 - 175,493,852 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	2	175,372,290 - 175,493,852 (+)	Ensembl				GRCr8
mRatBN7.2	2	173,074,383 - 173,195,962 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	173,074,368 - 173,196,010 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	2	180,224,015 - 180,343,253 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	178,246,357 - 178,365,598 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	172,835,607 - 172,955,106 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	186,979,850 - 187,102,523 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	186,980,793 - 187,101,768 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	2	206,384,799 - 206,507,431 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	2	179,676,236 - 179,796,785 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	2	167,024,592 - 167,144,568 (+)	NCBI		Celera
RGSC_v3.1	2	179,626,341 - 179,746,891 (+)	NCBI
Cytogenetic Map	2	q34	NCBI

ARHGEF11
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	156,934,840 - 157,046,903 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	156,934,840 - 157,046,903 (-)	Ensembl			hg38	GRCh38
GRCh37	1	156,904,632 - 157,016,695 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	155,171,256 - 155,281,786 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	1	153,717,705 - 153,828,235	NCBI
Celera	1	129,975,863 - 130,086,340 (-)	NCBI		Celera
Cytogenetic Map	1	q23.1	NCBI
HuRef	1	128,263,003 - 128,403,804 (-)	NCBI		HuRef
CHM1_1	1	158,301,064 - 158,411,558 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	156,071,681 - 156,183,721 (-)	NCBI		T2T-CHM13v2.0

Arhgef11
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	87,524,855 - 87,645,346 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	87,524,866 - 87,645,341 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	3	87,617,548 - 87,738,039 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	87,617,559 - 87,738,034 (+)	Ensembl			mm10	GRCm38
MGSCv37	3	87,422,673 - 87,541,955 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	3	87,704,678 - 87,823,960 (+)	NCBI		MGSCv36	mm8
Celera	3	87,655,238 - 87,774,229 (+)	NCBI		Celera
Cytogenetic Map	3	F1	NCBI
cM Map	3	38.22	NCBI

Arhgef11
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955545	2,989,774 - 3,097,003 (-)	Ensembl
ChiLan1.0	NW_004955545	2,988,676 - 3,099,159 (-)	NCBI	ChiLan1.0	ChiLan1.0

ARHGEF11
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	92,797,589 - 92,910,122 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	92,532,333 - 92,644,715 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	132,277,514 - 132,390,041 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	136,100,575 - 136,210,253 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	136,101,732 - 136,208,896 (-)	Ensembl			panPan2	panpan1.1

ARHGEF11
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	41,011,956 - 41,098,134 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	41,011,830 - 41,097,487 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	40,499,160 - 40,585,236 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	40,874,361 - 40,960,526 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	40,874,219 - 40,960,633 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	40,656,641 - 40,742,722 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	40,709,544 - 40,795,782 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	40,992,902 - 41,079,222 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Arhgef11
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	27,036,196 - 27,147,213 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936580	6,067,429 - 6,177,601 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936580	6,066,577 - 6,177,595 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ARHGEF11
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	93,046,770 - 93,160,084 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	4	93,045,533 - 93,160,756 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	101,684,353 - 101,732,762 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ARHGEF11
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	6,825,331 - 6,935,110 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	6,883,815 - 6,933,961 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666038	6,100,669 - 6,210,618 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Arhgef11
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624885	2,043,672 - 2,171,491 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624885	2,042,718 - 2,171,368 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Variants

Variants in Arhgef11
560 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	80
Count of miRNA genes:	70
Interacting mature miRNAs:	79
Transcripts:	ENSRNOT00000020717
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1358356	Srcrt1	Stress Responsive Cort QTL1	3.66		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	2	163997722	225110681	Rat
1578648	Bss11	Bone structure and strength QTL 11	4.7		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	2	169358774	214358774	Rat
1331734	Bp204	Blood pressure QTL 204	3.61192		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	170656145	239614549	Rat
631566	Bp90	Blood pressure QTL 90		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	149957381	221199885	Rat
1298074	Bp164	Blood pressure QTL 164		0.003	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	44537979	205135428	Rat
1354648	Bp239	Blood pressure QTL 239		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	67845370	229470703	Rat
1354649	Kidm17	Kidney mass QTL 17	2.9		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	2	83465462	229820014	Rat
10755499	Bp389	Blood pressure QTL 389	2.61		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	20695736	231474293	Rat
1298076	Bp166	Blood pressure QTL 166		0.0009	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	138595962	205135428	Rat
1581576	Pur7	Proteinuria QTL 7		0.0001	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	2	80396178	220931218	Rat
152025245	Scl81	Serum cholesterol level QTL 81	3.49		blood cholesterol amount (VT:0000180)		2	124537199	209621565	Rat
1581578	Cm49	Cardiac mass QTL 49	4.9	0.01	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	2	145807215	220931416	Rat
631198	Cm22	Cardiac mass QTL 22	4.3	0.0008	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	2	78269809	208420281	Rat
1554319	Bmd2	Bone mineral density QTL 2	13.4	0.0001	lumbar vertebra area (VT:0010570)	lumbar vertebra cross-sectional area (CMO:0001689)	2	122597372	215234002	Rat
12879836	Kidm61	Kidney mass QTL 61		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	154723085	199723085	Rat
1581569	Uae32	Urinary albumin excretion QTL 32		0.0001	urine protein amount (VT:0005160)	urine albumin excretion rate (CMO:0000757)	2	80396178	220931218	Rat
10043136	Iddm54	Insulin dependent diabetes mellitus QTL 54	3.4	0.0001	blood glucose amount (VT:0000188)	age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)	2	145807215	190807215	Rat
12879837	Am2	Aortic mass QTL 2		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	2	154723085	199723085	Rat
10043139	Iddm55	Insulin dependent diabetes mellitus QTL 55	3.1	0.0001	blood glucose amount (VT:0000188)	age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)	2	150313808	195313808	Rat
12879838	Cm86	Cardiac mass QTL 86		0.002	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	2	154723085	199723085	Rat
1302793	Bw16	Body weight QTL 16	5	0.0001	body mass (VT:0001259)	body weight (CMO:0000012)	2	159440891	205135267	Rat
12879839	Cm85	Cardiac mass QTL 85		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	2	154723085	199723085	Rat
1549833	Bp257	Blood pressure QTL 257		0.003	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	170652929	215652929	Rat
1358900	Bw48	Body weight QTL 48	4.88		body mass (VT:0001259)	body weight (CMO:0000012)	2	159440891	220931218	Rat
4889834	Pur24	Proteinuria QTL 24	5.8	0.014	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	2	171994826	205135428	Rat
12879845	Cm89	Cardiac mass QTL 89		0.008	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	2	154723085	178247591	Rat
61473	Bp19	Blood pressure QTL 19	6.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	175008837	178247591	Rat
1359030	Bp277	Blood pressure QTL 277			arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	143565208	188565208	Rat
12879846	Cm90	Cardiac mass QTL 90		0.011	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	2	154723085	178247591	Rat
12879847	Am4	Aortic mass QTL 4		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	2	154723085	178247591	Rat
7771605	Memor19	Memory QTL 19		0.00001	exploratory behavior trait (VT:0010471)	measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)	2	172499769	175588177	Rat
1331760	Bp206	Blood pressure QTL 206	3.62454		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	4265106	205135428	Rat
12879840	Bw179	Body weight QTL 179		0.005	body mass (VT:0001259)	body weight (CMO:0000012)	2	154723085	199723085	Rat
7771603	Bp371	Blood pressure QTL 371		0.00001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	172499769	175588177	Rat
1581502	Esta3	Estrogen-induced thymic atrophy QTL 3			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	2	139067258	192287892	Rat
1359032	Hrtrt18	Heart rate QTL 18			heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	2	159440760	195313808	Rat
2301966	Bp322	Blood pressure QTL 322	3.58		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	144882354	205135428	Rat
1298080	Bp163	Blood pressure QTL 163		0.02	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	67845182	205135428	Rat
1357991	Ael2	Aortic elastin QTL 2	4.2	0.000071	aorta elastin amount (VT:0003905)	aortic elastin	2	169227906	214227906	Rat
8662832	Vetf7	Vascular elastic tissue fragility QTL 7	3.5		aorta elastin amount (VT:0003905)	aorta wall extracellular elastin dry weight to aorta wall dry weight ratio (CMO:0002002)	2	83400752	223709938	Rat
1298085	Bp165	Blood pressure QTL 165		0.0006	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	44537979	205135428	Rat
1359022	Ppulsi1	Prepulse inhibition QTL 1	3.63		prepulse inhibition trait (VT:0003088)	acoustic startle response measurement (CMO:0001519)	2	139067258	184067258	Rat
1641891	Alcrsp17	Alcohol response QTL 17			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	2	151869660	251712708	Rat
724534	Uae6	Urinary albumin excretion QTL 6	10		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	2	80396034	220931416	Rat
61374	Edpm2	Estrogen-dependent pituitary mass QTL 2	4.42	0.86	pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	2	78269809	205135428	Rat
8662843	Vetf9	Vascular elastic tissue fragility QTL 9	2.05		thoracic aorta molecular composition trait (VT:0010568)	aorta wall extracellular elastin dry weight to aorta wall extracellular collagen weight ratio (CMO:0002003)	2	159440760	228950743	Rat
2301415	Cm67	Cardiac mass QTL 67		0.003	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	2	154723085	178247591	Rat
1331794	Bp202	Blood pressure QTL 202	3.66819		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	143344967	251712708	Rat
71113	Cari2	Carrageenan-induced inflammation QTL 2	2.7	0.009	hypodermis integrity trait (VT:0010550)	inflammatory exudate volume (CMO:0001429)	2	143746578	205135428	Rat
1331805	Cm29	Cardiac mass QTL 29	3.50746		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	2	143344967	251712708	Rat
11565180	Kidm56	Kidney mass QTL 56		0.003	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	154723085	178247591	Rat
634308	Sach6	Saccharin preference QTL 6	4.9		taste sensitivity trait (VT:0001986)	saccharin intake volume to total fluid intake volume ratio (CMO:0001601)	2	114384617	215381366	Rat
1598805	Memor8	Memory QTL 8	3		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	2	150096616	195096616	Rat
11565181	Bw176	Body weight QTL 176		0.002	body mass (VT:0001259)	body weight (CMO:0000012)	2	154723085	178247591	Rat
1358917	Cm42	Cardiac mass QTL 42	2.82		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	27148328	206613235	Rat
724568	Uae13	Urinary albumin excretion QTL 13	4.4		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	2	145306936	212705578	Rat
1358913	Cm41	Cardiac mass QTL 41	2.73		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	27148328	206613235	Rat
1300165	Rf9	Renal function QTL 9	3.28		kidney glomerulus integrity trait (VT:0010546)	index of glomerular damage (CMO:0001135)	2	113746222	205135428	Rat
61401	Niddm2	Non-insulin dependent diabetes mellitus QTL 2	4.54		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	2	147287892	192287892	Rat
631507	Bp105	Blood pressure QTL 105		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	114384617	215381366	Rat
1641925	Alcrsp2	Alcohol response QTL 2			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	2	151869660	223841096	Rat
1354609	Niddm62	Non-insulin dependent diabetes mellitus QTL 62	4.72	0.000006	insulin secretion trait (VT:0003564)	plasma insulin level (CMO:0000342)	2	117415288	205135428	Rat
1598833	Bp295	Blood pressure QTL 295	3.5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	150096616	195096616	Rat
1354622	Kidm16	Kidney mass QTL 16	3		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	2	83465462	225110681	Rat
631266	Bp132	Blood pressure QTL 132		0.0005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	47856345	205135428	Rat
631522	Bp74	Blood pressure QTL 74		0.05	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	175008837	220008837	Rat
7488927	Bp365	Blood pressure QTL 365		0.008	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	165453811	210453811	Rat
7488925	Bp364	Blood pressure QTL 364		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	163253030	208253030	Rat
2293843	Kiddil6	Kidney dilation QTL 6	3.1		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	2	44537979	184731399	Rat
2306901	Bp337	Blood pressure QTL 337		0.01	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	166372086	229820014	Rat
1354605	Rf48	Renal function QTL 48	2.9		blood creatinine amount (VT:0005328)	plasma creatinine level (CMO:0000537)	2	76328396	209350714	Rat
7488904	Bp363	Blood pressure QTL 363		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	175279960	178247591	Rat

Markers in Region

D2Mco45

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	173,103,977 - 173,104,221 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	187,009,630 - 187,009,873	NCBI	Rnor6.0
Rnor_5.0	2	206,414,549 - 206,414,792	UniSTS	Rnor5.0
RGSC_v3.4	2	179,704,792 - 179,705,036	RGD	RGSC3.4
RGSC_v3.4	2	179,704,793 - 179,705,036	UniSTS	RGSC3.4
Celera	2	167,052,956 - 167,053,199	UniSTS
Cytogenetic Map	2	q34	UniSTS

BI289089

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	173,194,055 - 173,194,162 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	187,100,617 - 187,100,723	NCBI	Rnor6.0
Rnor_5.0	2	206,505,525 - 206,505,631	UniSTS	Rnor5.0
RGSC_v3.4	2	179,795,831 - 179,795,937	UniSTS	RGSC3.4
Celera	2	167,143,614 - 167,143,720	UniSTS
RH 3.4 Map	2	1130.4	UniSTS
Cytogenetic Map	2	q34	UniSTS

Genetic Models

This gene Arhgef11 is modified in the following models/strains:

SS-Arhgef11^em5Mcwi SS-Arhgef11^em4Mcwi

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	163	91	90	59	92	59	6	355	192	11	142	80	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_023982	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006232759	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006232766	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008761214	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008761215	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008761216	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008761217	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008761219	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008761220	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008761222	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008761223	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008761224	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008761225	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591126	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039103176	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039103177	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039103178	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039103179	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039103180	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039103181	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039103182	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039103183	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039103184	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039103185	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039103186	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039103187	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039103188	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039103189	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282598	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282599	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282600	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282601	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282602	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282603	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282604	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282605	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282606	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC119000	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF225961	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473976	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000020717 ⟹ ENSRNOP00000020717

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	2	175,436,812 - 175,491,777 (+)	Ensembl
mRatBN7.2 Ensembl	2	173,138,916 - 173,193,887 (+)	Ensembl
Rnor_6.0 Ensembl	2	186,980,992 - 187,101,571 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000091336 ⟹ ENSRNOP00000070996

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	2	175,436,812 - 175,491,777 (+)	Ensembl
mRatBN7.2 Ensembl	2	173,138,916 - 173,193,887 (+)	Ensembl
Rnor_6.0 Ensembl	2	186,980,793 - 187,101,768 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000106820 ⟹ ENSRNOP00000086384

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	2	175,372,290 - 175,493,852 (+)	Ensembl
mRatBN7.2 Ensembl	2	173,074,368 - 173,196,010 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000114540 ⟹ ENSRNOP00000086176

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	2	175,372,290 - 175,493,852 (+)	Ensembl
mRatBN7.2 Ensembl	2	173,074,402 - 173,196,010 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000116714 ⟹ ENSRNOP00000088812

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	2	175,373,291 - 175,493,852 (+)	Ensembl
mRatBN7.2 Ensembl	2	173,074,389 - 173,196,010 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000119098 ⟹ ENSRNOP00000083614

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	2	175,372,290 - 175,493,852 (+)	Ensembl
mRatBN7.2 Ensembl	2	173,074,373 - 173,196,010 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000157908 ⟹ ENSRNOP00000108218

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	2	175,373,291 - 175,493,852 (+)	Ensembl

RefSeq Acc Id:

NM_023982 ⟹ NP_076472

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	175,372,290 - 175,493,852 (+)	NCBI
mRatBN7.2	2	173,074,395 - 173,195,962 (+)	NCBI
Rnor_6.0	2	186,980,992 - 187,101,571 (+)	NCBI
Rnor_5.0	2	206,384,799 - 206,507,431 (+)	NCBI
RGSC_v3.4	2	179,676,236 - 179,796,785 (+)	RGD
Celera	2	167,024,592 - 167,144,568 (+)	RGD

Sequence:

show sequence

ATGAGCATACGATTGCCCCATAGTATAGACAGATCAGCCAGTAAAAAGCAGTCTCACCTGTCCA
GTCCCATTGCATCCTGGTTAAGTAGCCTGTCTTCTCTGGGAGATTCTACACCTGAACGCACATC
CCCTTCTCACCACCGCCAGCCCTCTGACACTTCTGAGACAACAGCAGGTCTTGTTCAGCGCTGT
GTCATCATCCAAAAGGACCAGCATGGCTTTGGCTTCACAGTTAGTGGAGATCGCATTGTACTGG
TGCAGTCCGTGCGCCCTGGAGGCGCAGCCATGAAAGCTGGTGTGAAAGAGGGTGACCGGATCAT
CAAAGTAAACGGCACCATGGTGACCAATAGCTCACACCTGGAGGTGGTAAAGCTTATCAAATCT
GGCGCCTATGCTGCGCTTACCCTCCTAGGCTCTTCTCCTCCCTCCGTCGGCGTCTCTGGGCTCC
AGCAGAATCCATCTGTGGCAGGAGTGCTCAGAGTTAACCCCATCATTCCTCCACCACCTCCCCC
GCCACCCTTGCCACCTCCACAGCACATTACTGGACCCAAACCTCTTCAGGATCCTGAAGTCCAA
AAGCACGCCACTCAAATCCTCTGGAATATGCTAAGACAGGAGGAGGAAGAGTTACAGGACATAC
TTCCACCCTGTGGTGAGACCAGTCAGAGAACATGTGAGGGCCGCCTCTCTGTGGACTCCCAGGA
GGCAGACAGTGGCTTGGATTCTGGGACAGAACGCTTTCCCTCCATCAGTGAGTCATTGATGAAT
CGGAACTCAGTATTGTCAGATCCTGGACTAGACAGCCCTCAAACCTCCCCTGTAATCCTGGCCA
GGGTGGCCCAGCACCACAGGCGACAGGGCTCAGATGCAGCGTTGCTCCCGCTCAACCACCAGGG
TATAGATCAAAGCCCAAAGCCTCTGATTATTGGCCCAGAGGAAGATTATGACCCAGGTTATTTC
AACAATGAGAGTGACATCATCTTCCAAGATCTTGAAAAACTGAAGTCACATCCAGCTTACTTGG
TAGTTTTTCTACGTTACATCCTCTCTCAGGCAGACCCTGGCCCCCTGCTTTTTTATTTGTGTTC
AGAAGTTTATCAACAGACAAATCCCAAAGATTCCCGAAGTCTGGGGAAAGACATCTGGAACATT
TTCCTGGAGAAAAATGCGCCTCTCAGAGTGAAGATCCCTGAGATGTTGCAGGCTGAAATTGACC
TACGCCTGCGGAACAATGAGGACCCTCGCAATGTGCTCTGTGAAGCTCAGGAGGCAGTCATGCT
GGAAATCCAGGAGCAGATCAACGACTACAGATCCAAGCGTACTCTGGGCCTGGGCAGCCTCTAT
GGTGAAAATGACCTGCTAGGCCTGGATGGGGACCCTCTTCGAGAACGCCAAATGGCTGAGAAGC
AGCTGGCTGCCCTTGGAGATATCTTGTCCAAATATGAGGAAGATCGGAGTGCCCCCATGGACTT
TGCTGTTAATACCTTTATGAGCCACGCTGGGATCCGTCTTCGGGAGTCTCGATCCTCCTGCACG
GCAGAAAAGACCCAGTCTGCCCCTGACAAGGACAAGTGGCTGCCCTTCTTCCCTAAGACCAAGA
AGCAGAGCAGCAATTCCAAGAAAGAAAAGGATGCCTTGGAGGACAAGAAGCGAAACCCCATCCT
CAGATATATTGGGAAGCCCAAGAGCTCCTCTCAGAGCATTAAGCCAGGCAATGTGAGGAACATC
ATTCAGCACTTTGAGAACAGCCATCAGTATGATGTCCCAGAGCCGGGGACACAACGACTCTCAA
CAGGAAGCTTTCCTGAGGACCTGCTGGAGAGTGACAGTTCGCGCTCAGAGATTCGACTGGGCCG
CTCTGGGAGCCTCAAGGGCCGGGAAGAGATGAAGCGATCCCGGAAAGCAGAGAACGTGCCCCGG
CCTCGAAGTGACGTTGACATGGATGCTGCTGCAGAGGCTGCCCGCCTTCACCAGTCAGCCTCGT
CCTCTGCCTCCAGCCTCTCCACCAGGTCTCTTGAGAACCCAACCCCTCCCTTCACCCCCAAAAT
GGGCCGCAGGAGCATTGAGTCCCCCAATCTGGGGTTCTGTACAGACGTCATCCTTCCCCACCTC
CTGGAGGATGATCTGGGCCAATTGTCTGACCTGGAGCCAGAGCCAGAGGTCCAAAACTGGCAGC
ATACAGTAGGCAAGGATGTGGTGGCCAACCTGACCCAGAGGGAAATTGACCGGCAAGAGGTCAT
CAATGAGCTTTTTGTGACAGAAGCATCTCACCTGCGCACACTCCGAGTCCTGGACCTCATCTTC
TACCAGCGCATGAGAAAGGAGAACCTAATGCCTCGGGAAGAGCTAGCGCGGCTCTTCCCTAACC
TGCCTGAGCTCATAGAGATTCACAATTCCTGGTGTGAGGCCATGAAGAAGCTCCGGGAGGAGGG
CCCCATTATCAGAGACATCAGTGACCCCATGCTGGCTCGGTTTGATGGTCCTGCCCGAGAAGAA
CTCCAGCAAGTAGCTGCACAATTCTGTTCCTATCAGTCAGTAGCCCTAGAGCTAATCAGGACTA
AGCAACGTAAGGAGAGTCGGTTCCAGCTCTTCATGCAGGAGGCTGAGAGCCACCCTCAGTGCCG
GCGTCTGCAGCTCCGAGACCTCATCGTCTCTGAAATGCAACGGCTCACCAAGTACCCACTGCTG
CTAGAGAACATCATCAAGCACACAGAGGGTGGCACCTCTGAGCATGAGAAGCTCTGCCGTGCCC
GGGACCAGTGCCGGGAGATTCTCAAGTTTGTGAATGAAGCAGTAAAGCAGACAGAGAACCGCCA
CCGGCTAGAGGGGTACCAGAAACGCCTGGATGCCACTGCCCTAGAGCGGGCCAGCAACCCCTTG
GCAGCAGAGTTCAAGAGCCTGGATCTTACAACAAGGAAGATGATCCACGAGGGGCCTCTGACCT
GGAGGATCAGCAAAGACAAGACCCTGGACCTCCAGGTGCTTCTGCTTGAGGACCTGGTGGTACT
GCTGCAGAGACAAGAGGAGCGGCTGCTGCTAAAGTGCCACAGCAAGACAGCCGTGGGCTCCTCC
GACAGCAAGCAGACGTTCAGCCCTGTGCTGAAGCTCAATGCTGTGCTCATCCGCTCCGTGGCTA
CAGACAAGCGAGCCTTCTTCATCATCTGCACCTCCGAGCTGGGCCCTCCCCAGATCTATGAGCT
GGTTGCATTGACGTCATCAGACAAGAATATATGGATGGAGCTCTTAGAAGAGGCCGTGCAGAAT
GCCACCAAGCACCCTGGAGCTGCCCCAATCCCCATCCATCCCTCACCACCAGGATCCCAGGAGC
CGGCCTACCAGGGCTCCACCTCCAGCAGGGTAGAAATAAATGACTCAGAAGTATATCACACTGA
AAAAGAACCCAAGAAGCTACCTGAAGGCCCCGGGCCTGAGCAGAGAGTTCAAGACAAGCAGCTG
ATAGCACAAGGGGAGCCTGTGCAGGAAGAGGATGAAGAGGAATTGAGGACCTTGCCTCGAGCTC
CCCCCTCCCTGGATGGAGAAAACAGAGGCATCAGGACAAGGGACCCTGTCCTTCTGGCCCTCAC
AGGCCCTCTGCTCATGGAGGGACTTGCTGATGCTGCCCTGGAAGATGTGGAGAACTTGCGTCAC
CTGATCCTGTGGAGCCTGCTGCCTGGTCACACTGTGAAGACTCAGGCTGCTGGCGAGCCTGAGG
ATGACCTCACACCCACCCCTTCTGTCGTGAGCATCACCTCTCACCCCTGGGACCCAGGGTCCCC
AGGGCAAGCTCCCACCATAAGTGACAGCACCCGACTTGCGAGGCCAGAGGGCAGCCAGCCAGAG
GGCGAGGATGTTGCTGTCAGTTCTCTGGCACACCTGCCGCCAAGGACCAGAAGTTCTGGCGTCT
GGGACTCTCCTGAGCTGGATAGGAATCCGGCTGCAGAGGCTGCAAGCACAGAACCAGCAGCAAG
TTACAAGGTTGTGAGAAAAGTCTCTCTACTCCCTGGTGGTGGTGTCGGTGCAGCCAAGGTGGCG
GGCAGCAATGCTATCCCTGACAGTGGCCAGTCAGAATCTGAGCTATCTGAAGTGGAAGGCGGAG
CACAGGCTACGGGGAACTGTTTCTATGTCAGCATGCCAGCAGGACCTCTGGACTCCAGCACTGA
GCCTACTGGGACACCCCCAAGCCCCTCACAGTGTCACAGCCTCCCTGCATGGCCAACAGAGCCT
CAGCCCTACAGGGGAGTCCGTGGGGGTCAGTGTTCCAGCCTGGTCCGCAGGGATGTGGATGTGA
TCTTCCATACCATCGAGCAGCTCACCATCAAGCTTCACAGACTGAAGGACATGGAGCTGGCCCA
CAGAGAGCTGCTCAAGTCCCTTGGAGGAGAGTCATCGGGTGGAACCACACCTGTGGGGAGTTTT
CACACAGAGGCAGCCAGATGGACAGACTACTCCCTCTCTCCTCCAGCCAAGGAAGCCCTGGCCT
CTGATTCCCAAAATGGTCAGGAGCAGGGGTCCTGCCCTGAAGAAGGCTCCGACATCGCCCTGGA
AGACAGTGCCACTGACACAGCTGTGTCACCAGGACCATAG

hide sequence

RefSeq Acc Id:

XM_006232759 ⟹ XP_006232821

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	175,372,269 - 175,493,852 (+)	NCBI
mRatBN7.2	2	173,074,385 - 173,195,962 (+)	NCBI
Rnor_6.0	2	186,979,850 - 187,102,523 (+)	NCBI
Rnor_5.0	2	206,384,799 - 206,507,431 (+)	NCBI

Sequence:

show sequence

CGGGCCGCGGCCCGGGCTCTCCGCGCCGCTGTGGAGGGCGCCCTGGCCCTAGCCGAGCCGCAAC
AATAGTAGGAGCGGGTCGCCGGGCAGGATCGGCGGGCGAGGAGAAACGGGACCTCCGCTCCAGG
GCGCTGCGACGAGAGAGACTTTCCGAGCCTGGACGTGCAGGAGCACACAGAGCTGACTGAGGAA
TTTGTCTGAGAAAAAGGCCGATCTGAGGCTGTGGCTGAGCACGGGACTGGACTAGGTGGAGGAA
CCTGCAGGTCGAAAAGGAAAAGAAGGTTTAAGATTTCCTGGGGTTTGGCCAATGCTACCGTTTT
GAAGGTAGAAAGCATTGCGCTTCAGGTGTTTTGTGATTTTTGTGTGTCTCTCTGTGTCTGCACA
ATTGGCTGTTTCAGAATTCAAAACCTTTACTGTAGAAGATTGTTGTTTTGTTTTGATTTTTAAG
AATTCCACAAATTTTGCTTCCCGGGGCTGCACTGGACTTTGTGTTGTGTGCATACTGCTGTATG
GTTTTATTTATTTTAACTGTGCAAATCATCTGGAAGATTTTTTTCCCCCAAGTGCCATTTCGGA
TTTGTTCAGCCTTTTTGTTTTGTTTTGTTTTTCCTTCCCTGGAATAATTCTACTGTTGGCATTT
TAAGCATTTGAAAATCAGAGATATTTCAACCTTTGGAGCTTAAAGCTTCCCTGTCAACAGAAGG
ACAGCTGGGAAAACTGGATTGAAAGGATGGTTTTTATCTGTCTGCAGCAAAGACTGATATTTTG
AAGTCAGATTCTTTCTGTGGTTCGTTTTTTTAGCCCGTAGGGCTAACCTTGAAGAGATTTGTGG
TTAACATTTTGGTTTCTAAGAAGGTCATAGTTTTTCCTTTTTTTTTTTTTTTTTACTTTCCATT
TTCTTCTTTCTTTTTTAAGACAAGGGGAGGGGAGGGTAAAGGGTTACGGAAGGAGACCATGTTA
ACTGATAGAAGCAGACTAGCACCGCAGTTCCCAAGGTCCTGACAGCTGGAGGAAACAAGGGTTC
AGTCTTCAACTTGGGAGGCCTTCCTCTCACCTTCCTTGAAAATTGCAAGGGACTCAGGCCTGAT
CAAGACGCCCAAAGAAACGACAGGATTCCAGAACTGTGGAAACACGGAGAAACCATGAGCATAC
GATTGCCCCATAGTATAGACAGATCAGCCAGTAAAAAGCAGTCTCACCTGTCCAGCCCCATTGC
ATCCTGGTTAAGTAGCCTGTCTTCTCTGGGAGATTCTACACCTGAACGCACATCCCCTTCTCAC
CACCGCCAGCCCTCTGACACTTCTGAGACAACAGCAGGTCTTGTTCAGCGCTGTGTCATCATCC
AAAAGGACCAGCATGGCTTTGGCTTCACAGTTAGTGGAGATCGCATTGTACTGGTGCAGTCCGT
GCGCCCTGGAGGCGCAGCCATGAAAGCTGGTGTGAAAGAGGGTGACCGGATCATCAAAGTAAAC
GGCACCATGGTGACCAATAGCTCACACCTGGAGGTGGTAAAGCTTATCAAATCTGGCGCCTATG
CTGCGCTTACCCTCCTAGGCTCTTCTCCTCCCTCCGTCGGCGTCTCTGGGCTCCAGCAGAATCC
ATCTGTGGCAGGAGTGCCCAGAGTTAACCCCATCATTCCTCCACCACCTCCCCCGCCACCCTTG
CCACCTCCACAGCACATTACTGGACCCAAACCTCTTCAGGATCCTGAAGTCCAAAAGCACGCCA
CTCAAATCCTCAGGAATATGCTAAGACAGGAGGAGAAAGAGTTACAGCGTATCTATGAAGTGTA
TAGTCGGAACCCCGCCAGCCTGCTAGAAGAGCAAATGGAAGGTGCCCGGCGGCGAGTCACTCAG
TTACAGCTGAAGATCCAGCAGGAGACTGGTGGCTTAGTGGACATACTTCCACCCTGTGGTGAGA
CCAGTCAGAGAACATGTGAGGGCCGCCTCTCTGTGGACTCCCAGGAGGCAGACAGTGGCTTGGA
TTCTGGGACAGAACGCTTTCCCTCCATCAGTGAGTCATTGATGAATCGGAACTCAGTATTGTCA
GATCCTGGACTAGACAGCCCTCAAACCTCCCCTGTAATCCTGGCCAGGGTGGCCCAGCACCACA
GGCGACAGGGCTCAGATGCAGCGTTGCTCCCGCTCAACCACCAGGGTATAGATCAAAGCCCAAA
GCCTCTGATTATTGGCCCAGAGGAAGATTATGACCCAGGTTATTTCAACAATGAGAGTGACATC
ATCTTCCAAGATCTTGAAAAACTGAAGTCACATCCAGCTTACTTGGTAGTTTTTCTACGTTACA
TCTTCTCTCAGGCAGACCCTGGCCCCCTGCTTTTTTATTTGTGTTCAGAAGTTTATCAACAGAC
AAATCCCAAAGATTCCCGAAGTCTGGGGAAAGACATCTGGAACATTTTCCTAGAGAAAAATGCG
CCTCTCAGAGTGAAGATCCCTGAGATGTTGCAGGCTGAAATTGACCTACGCCTGCGGAACAATG
AGGACCCTCGCAATGTGCTCTGTGAAGCTCAGGAGGCAGTCATGCTGGAAATCCAGGAGCAGAT
CAACGACTACAGATCCAAGCGTACTCTGGGCCTGGGCAGCCTCTATGGTGAAAATGACCTGCTA
GGCCTGGATGGGGACCCTCTTCGAGAACGCCAAATGGCTGAGAAGCAGCTGGCTGCCCTTGGAG
ATATCTTGTCCAAATATGAGGAAGATCGGAGTGCCCCCATGGACTTTGCTGTTAATACCTTTAT
GAGCCACGCTGGGATCCGTCTTCGGGAGTCTCGATCCTCCTGCACGGCAGAAAAGACCCAGTCT
GCCCCTGACAAGGACAAGTGGCTGCCCTTCTTCCCTAAGACCAAGAAGCAGAGCAGCAATTCCA
AGAAAGAAAAGGATGCCTTGGAGGACAAGAAGCGAAACCCCATCCTCAGATATATTGGGAAGCC
CAAGAGCTCCTCTCAGAGCACATTTCATATTCCCTTGTCCCCTGTGGAAGTTAAGCCAGGCAAT
GTGAGGAACATCATTCAGCACTTTGAGAACAGCCATCAGTATGATGTCCCAGAGCCGGGGACAC
AACGACTCTCAACAGGAAGCTTTCCTGAGGACCTGCTGGAGAGTGACAGTTCGCGCTCAGAGAT
TCGACTGGGCCGCTCTGAGAGCCTCAAGGGCCGGGAAGAGATGAAGCGATCCCGGAAAGCAGAG
AACGTGCCCCGGTCTCGAAGTGACGTTGACATGGATGCTGCTGCAGAGGCTGCCCGCCTTCACC
AGTCAGCCTCGTCCTCTGCCTCCAGCCTCTCCACCAGGTCTCTTGAGAACCCAACCCCTCCCTT
CACCCCCAAAATGGGCCGCAGGAGCATTGAGTCCCCCAATCTGGGGTTCTGTACAGATGTCATC
CTTCCCCACCTCCTGGAGGATGATCTGGGCCAATTGTCTGACCTGGAGCCAGAGCCAGAGGTCC
AAAACTGGCAGCATACAGTAGGCAAGGATGTGGTGGCCAACCTGACCCAGAGGGAAATTGACCG
GCAAGAGGTCATCAATGAGCTTTTTGTGACAGAAGCATCTCACCTGCGCACACTCCGAGTCCTG
GACCTCATCTTCTACCAGCGCATGAGAAAGGAGAACCTAATGCCTCGGGAAGAGCTAGCGCGGC
TCTTCCCTAACCTGCCTGAGCTCATAGAGATTCACAATTCCTGGTGTGAGGCCATGAAGAAGCT
CCGGGAGGAGGGCCCCATTATCAGAGACATCAGTGACCTCATGCTGGCTCGGTTTGATGGTCCT
GCCCGAGAAGAACTCCAGCAAGTAGCTGCACAATTCTGTTCCTATCAGTCAGTAGCCCTAGAGC
TAATCAGGACTAAGCAACGTAAGGAGAGTCGGTTCCAGCTCTTCATGCAGGAGGCTGAGAGCCA
CCCTCAGTGCCGGCGTCTGCAGCTCCGAGACCTCATCGTCTCTGAAATGCAACGGCTCACCAAG
TACCCACTGCTGCTAGAGAACATCATCAAGCACACAGAGGGTGGCACCTCTGAGCATGAGAAGC
TCTGCCGTGCCCGGGACCAGTGCCGGGAGATTCTCAAGTTTGTGAATGAAGCAGTAAAGCAGAC
AGAGAACCGCCACCGGCTAGAGGGGTACCAGAAACGCCTGGATGCCACTGCCCTAGAGCGGGCC
AGCAACCCCTTGGCAGCAGAGTTCAAGAGCCTGGATCTTACAACAAGGAAGATGATCCACGAGG
GGCCTCTGACCTGGAGGATCAGCAAAGACAAGACCCTGGACCTCCAGGTGCTTCTGCTTGAGGA
CCTGGTGGTACTGCTGCAGAGACAAGAGGAGCGGCTGCTGCTAAAGTGCCACAGCAAGACAGCC
GTGGGCTCCTCCGACAGCAAGCAGACGTTCAGCCCTGTGCTGAAGCTCAATGCTGTGCTCATCC
GCTCCGTGGCTACAGACAAGCGAGCCTTCTTCATCATCTGCACCTCCGAGCTGGGCCCTCCCCA
GATCTATGAGCTGGTTGCATTGACGTCATCAGACAAGAATATATGGATGGAGCTCTTAGAAGAG
GCCGTGCAGAATGCCACCAAGCACCCTGGAGCTGCCCCAATCCCCATCCATCCCTCACCACCAG
GATCCCAGGAGCCGGCCTACCAGGGCTCCACCTCCAGCAGGGTAGAAATAAATGACTCAGAAGT
ATATCACACTGAAAAAGAACCCAAGAAGCTACCTGAAGGCCCCGGGCCTGAGCAGAGAGTTCAA
GACAAGCAGCTGATAGCACAAGGGGAGCCTGTGCAGGAAGAGGATGAAGAGGAATTGAGGACCT
TGCCTCGAGCTCCCCCCTCCCTGGATGGAGAAAACAGAGGCATCAGGACAAGGGACCCTGTCCT
TCTGGCCCTCACAGGCCCTCTGCTCATGGAGGGACTTGCTGATGCTGCCCTGGAAGATGTGGAG
AACTTGCGTCACCTGATCCTGTGGAGCCTGCTGCCTGGTCACACTGTGAAGACTCAGGCTGCTG
GCGAGCCTGAGGATGACCTCACACCCACCCCTTCTGTCGTGAGCATCACCTCTCACCCCTGGGA
CCCAGGGTCCCCAGGGCAAGCTCCCACCATAAGTGACAGCACCCGACTTGCGAGGCCAGAGGGC
AGCCAGCCAGAGGGCGAGGATGTTGCTGTCAGTTCTCTGGCACACCTGCCGCCAAGGACCAGAA
GTTCTGGCGTCTGGGACTCTCCTGAGCTGGATAGGAATCCGGCTGCAGAGGCTGCAAGCACAGA
ACCAGCAGCAAGTTACAAGGTTGTGAGAAAAGTCTCTCTACTCCCTGGTGGTGGTGTCGGTGCA
GCCAAGGTGGCGGGCAGCAATGCTATCCCTGACAGTGGCCAGTCAGAATCTGAGCTATCTGAAG
TGGAAGGCGGAGCACAGGCTACGGGGAACTGTTTCTATGTCAGCATGCCAGCAGGACCTCTGGA
CTCCAGCACTGAGCCTACTGGGACACCCCCAAGCCCCTCACAGTGTCACAGCCTCCCTGCATGG
CCAACAGAGCCTCAGCCCTACAGGGGAGTCCGTGGGGGTCAGTGTTCCAGCCTGGTCCGGAGGG
ATGTGGATGTGATCTTCCATACCATCGAGCAGCTCACCATCAAGCTTCACAGACTGAAGGACAT
GGAGCTGGCCCACAGAGAGCTGCTCAAGTCCCTTGGAGGAGAGTCATCGGGTGGAACCACACCT
GTGGGGAGTTTTCACACAGAGGCAGCCAGATGGACAGACTACTCCCTCTCTCCTCCAGCCAAGG
AAGCCCTGGCCTCTGATTCCCAAAATGGTCAGGAGCAGGGGTCCTGCCCTGAAGAAGGCTCCGA
CATCGCCCTGGAAGACAGTGCCACTGACACAGCTGTGTCACCAGGACCATAGCATCCAGACAAC
CAGAGTCTGGCCTGCCTCAGAGCACAACCCTGGGAGACCCAAGCCTCCCCTTGAAAGATGCCAC
GGGGCCAGGGAATCCCTCGTGTTGCCTGGTCTGTTTCCACCAGACAGTCCAGTTCAGTGTCTCT
TCCTCTGTTAGCCCAAGTCTCCATGGCTTTTGTCTCCTGAGCATGTTGACCACAACAGAAAGGC
CTCCACCCTGCATAGCCACATAGCCAGTGTGGGGTGTGCTGTGTGCACAGTGCCCTCAGGTGTG
CATGTCAGAGGAGGAGGCTTATGTGTGATTGCACTTTTTTCCTCCCCTTCTTCCTAGGCCCTGA
GACAGCTAGGTGCCTGGCTCTCCTCTTTGCCCCTTTAGTTTCCTATAAATGTCTATTGTATGTG
TATCTTTGCAATTGTAAATAACAGCCTTTTTTTTCTGTCCCTAGCATGTTCAACCAGTTAGAGA
GAGCCAGGCAGCAGCCCAGCTCAGGGCCATGATTGTTTATGTCCCACTGGCAGGGAGGTCTCCC
AGACTCCAGCTCTGTCAAGCTCCAGGGCCCGCCTCTGAAGCCTTGGCCACTTCTCCCTTCTTGT
TGTCAGGAGACACCCCTGCAGGGTTCCCCAGCCCTTCCCCACCTGCCCCATAGAAACAAATACA
GCAGGTACGGATCTCAAAACAGACCCCGAGAGAGATGTGGAGTGGATTGCTGGAGTCCCTGAGT
TAAGTCAGGGCTCTTCCTTCCCCAGGGGCCACAGCACCATTGCCTCATCACCCTGTCCTCACGC
CACTCCCCACGATGAACATACACACTGTGCTAGGTGTATATATACATATATATAAATATATATA
ATATATAAAATACAGATATGGAAATGACTGTTTTGCTGTTAAAATAATGTATACTCTTATTTTC
TTCCTTTCATGGTTAAGATTTTTTTAAAGAAAAGTTAAATATTC

hide sequence

RefSeq Acc Id:

XM_006232766 ⟹ XP_006232828

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	175,372,269 - 175,493,852 (+)	NCBI
mRatBN7.2	2	173,074,385 - 173,195,962 (+)	NCBI
Rnor_6.0	2	186,979,850 - 187,102,523 (+)	NCBI
Rnor_5.0	2	206,384,799 - 206,507,431 (+)	NCBI

Sequence:

show sequence

CGGGCCGCGGCCCGGGCTCTCCGCGCCGCTGTGGAGGGCGCCCTGGCCCTAGCCGAGCCGCAAC
AATAGTAGGAGCGGGTCGCCGGGCAGGATCGGCGGGCGAGGAGAAACGGGACCTCCGCTCCAGG
GCGCTGCGACGAGAGAGACTTTCCGAGCCTGGACGTGCAGGAGCACACAGAGCTGACTGAGGAA
TTTGTCTGAGAAAAAGGCCGATCTGAGGCTGTGGCTGAGCACGGGACTGGACTAGGTGGAGGAA
CCTGCAGGTCGAAAAGGAAAAGAAGGTTTAAGATTTCCTGGGGTTTGGCCAATGCTACCGTTTT
GAAGGTAGAAAGCATTGCGCTTCAGGTGTTTTGTGATTTTTGTGTGTCTCTCTGTGTCTGCACA
ATTGGCTGTTTCAGAATTCAAAACCTTTACTGTAGAAGATTGTTGTTTTGTTTTGATTTTTAAG
AATTCCACAAATTTTGCTTCCCGGGGCTGCACTGGACTTTGTGTTGTGTGCATACTGCTGTATG
GTTTTATTTATTTTAACTGTGCAAATCATCTGGAAGATTTTTTTCCCCCAAGTGCCATTTCGGA
TTTGTTCAGCCTTTTTGTTTTGTTTTGTTTTTCCTTCCCTGGAATAATTCTACTGTTGGCATTT
TAAGCATTTGAAAATCAGAGATATTTCAACCTTTGGAGCTTAAAGCTTCCCTGTCAACAGAAGG
ACAGCTGGGAAAACTGGATTGAAAGGATGGTTTTTATCTGTCTGCAGCAAAGACTGATATTTTG
AAGTCAGATTCTTTCTGTGGTTCGTTTTTTTAGCCCGTAGGGCTAACCTTGAAGAGATTTGTGG
TTAACATTTTGGTTTCTAAGAAGGTCATAGTTTTTCCTTTTTTTTTTTTTTTTTACTTTCCATT
TTCTTCTTTCTTTTTTAAGACAAGGGGAGGGGAGGGTAAAGGGTTACGGAAGGAGACCATGTTA
ACTGATAGAAGCAGACTAGCACCGCAGTTCCCAAGGTCCTGACAGCTGGAGGAAACAAGGGTTC
AGTCTTCAACTTGGGAGGCCTTCCTCTCACCTTCCTTGAAAATTGCAAGGGACTCAGGCCTGAT
CAAGACGCCCAAAGAAACGACAGGATTCCAGAACTGTGGAAACACGGAGAAACCATGAGCATAC
GATTGCCCCATAGTATAGACAGGTTAAGTAGCCTGTCTTCTCTGGGAGATTCTACACCTGAACG
CACATCCCCTTCTCACCACCGCCAGCCCTCTGACACTTCTGAGACAACAGCAGGTCTTGTTCAG
CGCTGTGTCATCATCCAAAAGGACCAGCATGGCTTTGGCTTCACAGTTAGTGGAGATCGCATTG
TACTGGTGCAGTCCGTGCGCCCTGGAGGCGCAGCCATGAAAGCTGGTGTGAAAGAGGGTGACCG
GATCATCAAAGTAAACGGCACCATGGTGACCAATAGCTCACACCTGGAGGTGGTAAAGCTTATC
AAATCTGGCGCCTATGCTGCGCTTACCCTCCTAGGCTCTTCTCCTCCCTCCGTCGGCGTCTCTG
GGCTCCAGCAGAATCCATCTGTGGCAGGAGTGCCCAGAGTTAACCCCATCATTCCTCCACCACC
TCCCCCGCCACCCTTGCCACCTCCACAGCACATTACTGGACCCAAACCTCTTCAGGATCCTGAA
GTCCAAAAGCACGCCACTCAAATCCTCAGGAATATGCTAAGACAGGAGGAGAAAGAGTTACAGC
GTATCTATGAAGTGTATAGTCGGAACCCCGCCAGCCTGCTAGAAGAGCAAATGGAAGGTGCCCG
GCGGCGAGTCACTCAGTTACAGCTGAAGATCCAGCAGGAGACTGGTGGCTTAGTGGACATACTT
CCACCCTGTGGTGAGACCAGTCAGAGAACATGTGAGGGCCGCCTCTCTGTGGACTCCCAGGAGG
CAGACAGTGGCTTGGATTCTGGGACAGAACGCTTTCCCTCCATCAGTGAGTCATTGATGAATCG
GAACTCAGTATTGTCAGATCCTGGACTAGACAGCCCTCAAACCTCCCCTGTAATCCTGGCCAGG
GTGGCCCAGCACCACAGGCGACAGGGCTCAGATGCAGCGTTGCTCCCGCTCAACCACCAGGGTA
TAGATCAAAGCCCAAAGCCTCTGATTATTGGCCCAGAGGAAGATTATGACCCAGGTTATTTCAA
CAATGAGAGTGACATCATCTTCCAAGATCTTGAAAAACTGAAGTCACATCCAGCTTACTTGGTA
GTTTTTCTACGTTACATCTTCTCTCAGGCAGACCCTGGCCCCCTGCTTTTTTATTTGTGTTCAG
AAGTTTATCAACAGACAAATCCCAAAGATTCCCGAAGTCTGGGGAAAGACATCTGGAACATTTT
CCTAGAGAAAAATGCGCCTCTCAGAGTGAAGATCCCTGAGATGTTGCAGGCTGAAATTGACCTA
CGCCTGCGGAACAATGAGGACCCTCGCAATGTGCTCTGTGAAGCTCAGGAGGCAGTCATGCTGG
AAATCCAGGAGCAGATCAACGACTACAGATCCAAGCGTACTCTGGGCCTGGGCAGCCTCTATGG
TGAAAATGACCTGCTAGGCCTGGATGGGGACCCTCTTCGAGAACGCCAAATGGCTGAGAAGCAG
CTGGCTGCCCTTGGAGATATCTTGTCCAAATATGAGGAAGATCGGAGTGCCCCCATGGACTTTG
CTGTTAATACCTTTATGAGCCACGCTGGGATCCGTCTTCGGGAGTCTCGATCCTCCTGCACGGC
AGAAAAGACCCAGTCTGCCCCTGACAAGGACAAGTGGCTGCCCTTCTTCCCTAAGACCAAGAAG
CAGAGCAGCAATTCCAAGAAAGAAAAGGATGCCTTGGAGGACAAGAAGCGAAACCCCATCCTCA
GATATATTGGGAAGCCCAAGAGCTCCTCTCAGAGCACATTTCATATTCCCTTGTCCCCTGTGGA
AGTTAAGCCAGGCAATGTGAGGAACATCATTCAGCACTTTGAGAACAGCCATCAGTATGATGTC
CCAGAGCCGGGGACACAACGACTCTCAACAGGAAGCTTTCCTGAGGACCTGCTGGAGAGTGACA
GTTCGCGCTCAGAGATTCGACTGGGCCGCTCTGAGAGCCTCAAGGGCCGGGAAGAGATGAAGCG
ATCCCGGAAAGCAGAGAACGTGCCCCGGTCTCGAAGTGACGTTGACATGGATGCTGCTGCAGAG
GCTGCCCGCCTTCACCAGTCAGCCTCGTCCTCTGCCTCCAGCCTCTCCACCAGGTCTCTTGAGA
ACCCAACCCCTCCCTTCACCCCCAAAATGGGCCGCAGGAGCATTGAGTCCCCCAATCTGGGGTT
CTGTACAGATGTCATCCTTCCCCACCTCCTGGAGGATGATCTGGGCCAATTGTCTGACCTGGAG
CCAGAGCCAGAGGTCCAAAACTGGCAGCATACAGTAGGCAAGGATGTGGTGGCCAACCTGACCC
AGAGGGAAATTGACCGGCAAGAGGTCATCAATGAGCTTTTTGTGACAGAAGCATCTCACCTGCG
CACACTCCGAGTCCTGGACCTCATCTTCTACCAGCGCATGAGAAAGGAGAACCTAATGCCTCGG
GAAGAGCTAGCGCGGCTCTTCCCTAACCTGCCTGAGCTCATAGAGATTCACAATTCCTGGTGTG
AGGCCATGAAGAAGCTCCGGGAGGAGGGCCCCATTATCAGAGACATCAGTGACCTCATGCTGGC
TCGGTTTGATGGTCCTGCCCGAGAAGAACTCCAGCAAGTAGCTGCACAATTCTGTTCCTATCAG
TCAGTAGCCCTAGAGCTAATCAGGACTAAGCAACGTAAGGAGAGTCGGTTCCAGCTCTTCATGC
AGGAGGCTGAGAGCCACCCTCAGTGCCGGCGTCTGCAGCTCCGAGACCTCATCGTCTCTGAAAT
GCAACGGCTCACCAAGTACCCACTGCTGCTAGAGAACATCATCAAGCACACAGAGGGTGGCACC
TCTGAGCATGAGAAGCTCTGCCGTGCCCGGGACCAGTGCCGGGAGATTCTCAAGTTTGTGAATG
AAGCAGTAAAGCAGACAGAGAACCGCCACCGGCTAGAGGGGTACCAGAAACGCCTGGATGCCAC
TGCCCTAGAGCGGGCCAGCAACCCCTTGGCAGCAGAGTTCAAGAGCCTGGATCTTACAACAAGG
AAGATGATCCACGAGGGGCCTCTGACCTGGAGGATCAGCAAAGACAAGACCCTGGACCTCCAGG
TGCTTCTGCTTGAGGACCTGGTGGTACTGCTGCAGAGACAAGAGGAGCGGCTGCTGCTAAAGTG
CCACAGCAAGACAGCCGTGGGCTCCTCCGACAGCAAGCAGACGTTCAGCCCTGTGCTGAAGCTC
AATGCTGTGCTCATCCGCTCCGTGGCTACAGACAAGCGAGCCTTCTTCATCATCTGCACCTCCG
AGCTGGGCCCTCCCCAGATCTATGAGCTGGTTGCATTGACGTCATCAGACAAGAATATATGGAT
GGAGCTCTTAGAAGAGGCCGTGCAGAATGCCACCAAGCACCCTGGAGCTGCCCCAATCCCCATC
CATCCCTCACCACCAGGATCCCAGGAGCCGGCCTACCAGGGCTCCACCTCCAGCAGGGTAGAAA
TAAATGACTCAGAAGTATATCACACTGAAAAAGAACCCAAGAAGCTACCTGAAGGCCCCGGGCC
TGAGCAGAGAGTTCAAGACAAGCAGCTGATAGCACAAGGGGAGCCTGTGCAGGAAGAGGATGAA
GAGGAATTGAGGACCTTGCCTCGAGCTCCCCCCTCCCTGGATGGAGAAAACAGAGGCATCAGGA
CAAGGGACCCTGTCCTTCTGGCCCTCACAGGCCCTCTGCTCATGGAGGGACTTGCTGATGCTGC
CCTGGAAGATGTGGAGAACTTGCGTCACCTGATCCTGTGGAGCCTGCTGCCTGGTCACACTGTG
AAGACTCAGGCTGCTGGCGAGCCTGAGGATGACCTCACACCCACCCCTTCTGTCGTGAGCATCA
CCTCTCACCCCTGGGACCCAGGGTCCCCAGGGCAAGCTCCCACCATAAGTGACAGCACCCGACT
TGCGAGGCCAGAGGGCAGCCAGCCAGAGGGCGAGGATGTTGCTGTCAGTTCTCTGGCACACCTG
CCGCCAAGGACCAGAAGTTCTGGCGTCTGGGACTCTCCTGAGCTGGATAGGAATCCGGCTGCAG
AGGCTGCAAGCACAGAACCAGCAGCAAGTTACAAGGTTGTGAGAAAAGTCTCTCTACTCCCTGG
TGGTGGTGTCGGTGCAGCCAAGGTGGCGGGCAGCAATGCTATCCCTGACAGTGGCCAGTCAGAA
TCTGAGCTATCTGAAGTGGAAGGCGGAGCACAGGCTACGGGGAACTGTTTCTATGTCAGCATGC
CAGCAGGACCTCTGGACTCCAGCACTGAGCCTACTGGGACACCCCCAAGCCCCTCACAGTGTCA
CAGCCTCCCTGCATGGCCAACAGAGCCTCAGCCCTACAGGGGAGTCCGTGGGGGTCAGTGTTCC
AGCCTGGTCCGGAGGGATGTGGATGTGATCTTCCATACCATCGAGCAGCTCACCATCAAGCTTC
ACAGACTGAAGGACATGGAGCTGGCCCACAGAGAGCTGCTCAAGTCCCTTGGAGGAGAGTCATC
GGGTGGAACCACACCTGTGGGGAGTTTTCACACAGAGGCAGCCAGATGGACAGACTACTCCCTC
TCTCCTCCAGCCAAGGAAGCCCTGGCCTCTGATTCCCAAAATGGTCAGGAGCAGGGGTCCTGCC
CTGAAGAAGGCTCCGACATCGCCCTGGAAGACAGTGCCACTGACACAGCTGTGTCACCAGGACC
ATAGCATCCAGACAACCAGAGTCTGGCCTGCCTCAGAGCACAACCCTGGGAGACCCAAGCCTCC
CCTTGAAAGATGCCACGGGGCCAGGGAATCCCTCGTGTTGCCTGGTCTGTTTCCACCAGACAGT
CCAGTTCAGTGTCTCTTCCTCTGTTAGCCCAAGTCTCCATGGCTTTTGTCTCCTGAGCATGTTG
ACCACAACAGAAAGGCCTCCACCCTGCATAGCCACATAGCCAGTGTGGGGTGTGCTGTGTGCAC
AGTGCCCTCAGGTGTGCATGTCAGAGGAGGAGGCTTATGTGTGATTGCACTTTTTTCCTCCCCT
TCTTCCTAGGCCCTGAGACAGCTAGGTGCCTGGCTCTCCTCTTTGCCCCTTTAGTTTCCTATAA
ATGTCTATTGTATGTGTATCTTTGCAATTGTAAATAACAGCCTTTTTTTTCTGTCCCTAGCATG
TTCAACCAGTTAGAGAGAGCCAGGCAGCAGCCCAGCTCAGGGCCATGATTGTTTATGTCCCACT
GGCAGGGAGGTCTCCCAGACTCCAGCTCTGTCAAGCTCCAGGGCCCGCCTCTGAAGCCTTGGCC
ACTTCTCCCTTCTTGTTGTCAGGAGACACCCCTGCAGGGTTCCCCAGCCCTTCCCCACCTGCCC
CATAGAAACAAATACAGCAGGTACGGATCTCAAAACAGACCCCGAGAGAGATGTGGAGTGGATT
GCTGGAGTCCCTGAGTTAAGTCAGGGCTCTTCCTTCCCCAGGGGCCACAGCACCATTGCCTCAT
CACCCTGTCCTCACGCCACTCCCCACGATGAACATACACACTGTGCTAGGTGTATATATACATA
TATATAAATATATATAATATATAAAATACAGATATGGAAATGACTGTTTTGCTGTTAAAATAAT
GTATACTCTTATTTTCTTCCTTTCATGGTTAAGATTTTTTTAAAGAAAAGTTAAATATTC

hide sequence

RefSeq Acc Id:

XM_017591126 ⟹ XP_017446615

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	175,372,269 - 175,493,852 (+)	NCBI
mRatBN7.2	2	173,074,385 - 173,195,962 (+)	NCBI
Rnor_6.0	2	186,979,850 - 187,102,523 (+)	NCBI

Sequence:

show sequence

CGGGCCGCGGCCCGGGCTCTCCGCGCCGCTGTGGAGGGCGCCCTGGCCCTAGCCGAGCCGCAAC
AATAGTAGGAGCGGGTCGCCGGGCAGGATCGGCGGGCGAGGAGAAACGGGACCTCCGCTCCAGG
GCGCTGCGACGAGAGAGACTTTCCGAGCCTGGACGTGCAGGAGCACACAGAGCTGACTGAGGAA
TTTGTCTGAGAAAAAGGCCGATCTGAGGCTGTGGCTGAGCACGGGACTGGACTAGGTGGAGGAA
CCTGCAGGTCGAAAAGGAAAAGAAGGTTTAAGATTTCCTGGGGTTTGGCCAATGCTACCGTTTT
GAAGGTAGAAAGCATTGCGCTTCAGGTGTTTTGTGATTTTTGTGTGTCTCTCTGTGTCTGCACA
ATTGGCTGTTTCAGAATTCAAAACCTTTACTGTAGAAGATTGTTGTTTTGTTTTGATTTTTAAG
AATTCCACAAATTTTGCTTCCCGGGGCTGCACTGGACTTTGTGTTGTGTGCATACTGCTGTATG
GTTTTATTTATTTTAACTGTGCAAATCATCTGGAAGATTTTTTTCCCCCAAGTGCCATTTCGGA
TTTGTTCAGCCTTTTTGTTTTGTTTTGTTTTTCCTTCCCTGGAATAATTCTACTGTTGGCATTT
TAAGCATTTGAAAATCAGAGATATTTCAACCTTTGGAGCTTAAAGCTTCCCTGTCAACAGAAGG
ACAGCTGGGAAAACTGGATTGAAAGGATGGTTTTTATCTGTCTGCAGCAAAGACTGATATTTTG
AAGTCAGATTCTTTCTGTGGTTCGTTTTTTTAGCCCGTAGGGCTAACCTTGAAGAGATTTGTGG
TTAACATTTTGGTTTCTAAGAAGGTCATAGTTTTTCCTTTTTTTTTTTTTTTTTACTTTCCATT
TTCTTCTTTCTTTTTTAAGACAAGGGGAGGGGAGGGTAAAGGGTTACGGAAGGAGACCATGTTA
ACTGATAGAAGCAGACTAGCACCGCAGTTCCCAAGGTCCTGACAGCTGGAGGAAACAAGGGTTC
AGTCTTCAACTTGGGAGGCCTTCCTCTCACCTTCCTTGAAAATTGCAAGGGACTCAGGCCTGAT
CAAGACGCCCAAAGAAACGACAGGATTCCAGAACTGTGGAAACACGGAGAAACCATGAGCATAC
GATTGCCCCATAGTATAGACAGATCAGCCAGTAAAAAGCAGTCTCACCTGTCCAGGTTAAGTAG
CCTGTCTTCTCTGGGAGATTCTACACCTGAACGCACATCCCCTTCTCACCACCGCCAGCCCTCT
GACACTTCTGAGACAACAGCAGGTCTTGTTCAGCGCTGTGTCATCATCCAAAAGGACCAGCATG
GCTTTGGCTTCACAGTTAGTGGAGATCGCATTGTACTGGTGCAGTCCGTGCGCCCTGGAGGCGC
AGCCATGAAAGCTGGTGTGAAAGAGGGTGACCGGATCATCAAAGTAAACGGCACCATGGTGACC
AATAGCTCACACCTGGAGGTGGTAAAGCTTATCAAATCTGGCGCCTATGCTGCGCTTACCCTCC
TAGGCTCTTCTCCTCCCTCCGTCGGCGTCTCTGGGCTCCAGCAGAATCCATCTGTGGCAGGAGT
GCCCAGAGTTAACCCCATCATTCCTCCACCACCTCCCCCGCCACCCTTGCCACCTCCACAGCAC
ATTACTGGACCCAAACCTCTTCAGGATCCTGAAGTCCAAAAGCACGCCACTCAAATCCTCAGGA
ATATGCTAAGACAGGAGGAGAAAGAGTTACAGCGTATCTATGAAGTGTATAGTCGGAACCCCGC
CAGCCTGCTAGAAGAGCAAATGGAAGGTGCCCGGCGGCGAGTCACTCAGTTACAGCTGAAGATC
CAGCAGGAGACTGGTGGCTTAGTGGACATACTTCCACCCTGTGGTGAGACCAGTCAGAGAACAT
GTGAGGGCCGCCTCTCTGTGGACTCCCAGGAGGCAGACAGTGGCTTGGATTCTGGGACAGAACG
CTTTCCCTCCATCAGTGAGTCATTGATGAATCGGAACTCAGTATTGTCAGATCCTGGACTAGAC
AGCCCTCAAACCTCCCCTGTAATCCTGGCCAGGGTGGCCCAGCACCACAGGCGACAGGGCTCAG
ATGCAGCGTTGCTCCCGCTCAACCACCAGGGTATAGATCAAAGCCCAAAGCCTCTGATTATTGG
CCCAGAGGAAGATTATGACCCAGGTTATTTCAACAATGAGAGTGACATCATCTTCCAAGATCTT
GAAAAACTGAAGTCACATCCAGCTTACTTGGTAGTTTTTCTACGTTACATCTTCTCTCAGGCAG
ACCCTGGCCCCCTGCTTTTTTATTTGTGTTCAGAAGTTTATCAACAGACAAATCCCAAAGATTC
CCGAAGTCTGGGGAAAGACATCTGGAACATTTTCCTAGAGAAAAATGCGCCTCTCAGAGTGAAG
ATCCCTGAGATGTTGCAGGCTGAAATTGACCTACGCCTGCGGAACAATGAGGACCCTCGCAATG
TGCTCTGTGAAGCTCAGGAGGCAGTCATGCTGGAAATCCAGGAGCAGATCAACGACTACAGATC
CAAGCGTACTCTGGGCCTGGGCAGCCTCTATGGTGAAAATGACCTGCTAGGCCTGGATGGGGAC
CCTCTTCGAGAACGCCAAATGGCTGAGAAGCAGCTGGCTGCCCTTGGAGATATCTTGTCCAAAT
ATGAGGAAGATCGGAGTGCCCCCATGGACTTTGCTGTTAATACCTTTATGAGCCACGCTGGGAT
CCGTCTTCGGGAGTCTCGATCCTCCTGCACGGCAGAAAAGACCCAGTCTGCCCCTGACAAGGAC
AAGTGGCTGCCCTTCTTCCCTAAGACCAAGAAGCAGAGCAGCAATTCCAAGAAAGAAAAGGATG
CCTTGGAGGACAAGAAGCGAAACCCCATCCTCAGATATATTGGGAAGCCCAAGAGCTCCTCTCA
GAGCACATTTCATATTCCCTTGTCCCCTGTGGAAGTTAAGCCAGGCAATGTGAGGAACATCATT
CAGCACTTTGAGAACAGCCATCAGTATGATGTCCCAGAGCCGGGGACACAACGACTCTCAACAG
GAAGCTTTCCTGAGGACCTGCTGGAGAGTGACAGTTCGCGCTCAGAGATTCGACTGGGCCGCTC
TGAGAGCCTCAAGGGCCGGGAAGAGATGAAGCGATCCCGGAAAGCAGAGAACGTGCCCCGGTCT
CGAAGTGACGTTGACATGGATGCTGCTGCAGAGGCTGCCCGCCTTCACCAGTCAGCCTCGTCCT
CTGCCTCCAGCCTCTCCACCAGGTCTCTTGAGAACCCAACCCCTCCCTTCACCCCCAAAATGGG
CCGCAGGAGCATTGAGTCCCCCAATCTGGGGTTCTGTACAGATGTCATCCTTCCCCACCTCCTG
GAGGATGATCTGGGCCAATTGTCTGACCTGGAGCCAGAGCCAGAGGTCCAAAACTGGCAGCATA
CAGTAGGCAAGGATGTGGTGGCCAACCTGACCCAGAGGGAAATTGACCGGCAAGAGGTCATCAA
TGAGCTTTTTGTGACAGAAGCATCTCACCTGCGCACACTCCGAGTCCTGGACCTCATCTTCTAC
CAGCGCATGAGAAAGGAGAACCTAATGCCTCGGGAAGAGCTAGCGCGGCTCTTCCCTAACCTGC
CTGAGCTCATAGAGATTCACAATTCCTGGTGTGAGGCCATGAAGAAGCTCCGGGAGGAGGGCCC
CATTATCAGAGACATCAGTGACCTCATGCTGGCTCGGTTTGATGGTCCTGCCCGAGAAGAACTC
CAGCAAGTAGCTGCACAATTCTGTTCCTATCAGTCAGTAGCCCTAGAGCTAATCAGGACTAAGC
AACGTAAGGAGAGTCGGTTCCAGCTCTTCATGCAGGAGGCTGAGAGCCACCCTCAGTGCCGGCG
TCTGCAGCTCCGAGACCTCATCGTCTCTGAAATGCAACGGCTCACCAAGTACCCACTGCTGCTA
GAGAACATCATCAAGCACACAGAGGGTGGCACCTCTGAGCATGAGAAGCTCTGCCGTGCCCGGG
ACCAGTGCCGGGAGATTCTCAAGTTTGTGAATGAAGCAGTAAAGCAGACAGAGAACCGCCACCG
GCTAGAGGGGTACCAGAAACGCCTGGATGCCACTGCCCTAGAGCGGGCCAGCAACCCCTTGGCA
GCAGAGTTCAAGAGCCTGGATCTTACAACAAGGAAGATGATCCACGAGGGGCCTCTGACCTGGA
GGATCAGCAAAGACAAGACCCTGGACCTCCAGGTGCTTCTGCTTGAGGACCTGGTGGTACTGCT
GCAGAGACAAGAGGAGCGGCTGCTGCTAAAGTGCCACAGCAAGACAGCCGTGGGCTCCTCCGAC
AGCAAGCAGACGTTCAGCCCTGTGCTGAAGCTCAATGCTGTGCTCATCCGCTCCGTGGCTACAG
ACAAGCGAGCCTTCTTCATCATCTGCACCTCCGAGCTGGGCCCTCCCCAGATCTATGAGCTGGT
TGCATTGACGTCATCAGACAAGAATATATGGATGGAGCTCTTAGAAGAGGCCGTGCAGAATGCC
ACCAAGCACCCTGGAGCTGCCCCAATCCCCATCCATCCCTCACCACCAGGATCCCAGGAGCCGG
CCTACCAGGGCTCCACCTCCAGCAGGGTAGAAATAAATGACTCAGAAGTATATCACACTGAAAA
AGAACCCAAGAAGCTACCTGAAGGCCCCGGGCCTGAGCAGAGAGTTCAAGACAAGCAGCTGATA
GCACAAGGGGAGCCTGTGCAGGAAGAGGATGAAGAGGAATTGAGGACCTTGCCTCGAGCTCCCC
CCTCCCTGGATGGAGAAAACAGAGGCATCAGGACAAGGGACCCTGTCCTTCTGGCCCTCACAGG
CCCTCTGCTCATGGAGGGACTTGCTGATGCTGCCCTGGAAGATGTGGAGAACTTGCGTCACCTG
ATCCTGTGGAGCCTGCTGCCTGGTCACACTGTGAAGACTCAGGCTGCTGGCGAGCCTGAGGATG
ACCTCACACCCACCCCTTCTGTCGTGAGCATCACCTCTCACCCCTGGGACCCAGGGTCCCCAGG
GCAAGCTCCCACCATAAGTGACAGCACCCGACTTGCGAGGCCAGAGGGCAGCCAGCCAGAGGGC
GAGGATGTTGCTGTCAGTTCTCTGGCACACCTGCCGCCAAGGACCAGAAGTTCTGGCGTCTGGG
ACTCTCCTGAGCTGGATAGGAATCCGGCTGCAGAGGCTGCAAGCACAGAACCAGCAGCAAGTTA
CAAGGTTGTGAGAAAAGTCTCTCTACTCCCTGGTGGTGGTGTCGGTGCAGCCAAGGTGGCGGGC
AGCAATGCTATCCCTGACAGTGGCCAGTCAGAATCTGAGCTATCTGAAGTGGAAGGCGGAGCAC
AGGCTACGGGGAACTGTTTCTATGTCAGCATGCCAGCAGGACCTCTGGACTCCAGCACTGAGCC
TACTGGGACACCCCCAAGCCCCTCACAGTGTCACAGCCTCCCTGCATGGCCAACAGAGCCTCAG
CCCTACAGGGGAGTCCGTGGGGGTCAGTGTTCCAGCCTGGTCCGGAGGGATGTGGATGTGATCT
TCCATACCATCGAGCAGCTCACCATCAAGCTTCACAGACTGAAGGACATGGAGCTGGCCCACAG
AGAGCTGCTCAAGTCCCTTGGAGGAGAGTCATCGGGTGGAACCACACCTGTGGGGAGTTTTCAC
ACAGAGGCAGCCAGATGGACAGACTACTCCCTCTCTCCTCCAGCCAAGGAAGCCCTGGCCTCTG
ATTCCCAAAATGGTCAGGAGCAGGGGTCCTGCCCTGAAGAAGGCTCCGACATCGCCCTGGAAGA
CAGTGCCACTGACACAGCTGTGTCACCAGGACCATAGCATCCAGACAACCAGAGTCTGGCCTGC
CTCAGAGCACAACCCTGGGAGACCCAAGCCTCCCCTTGAAAGATGCCACGGGGCCAGGGAATCC
CTCGTGTTGCCTGGTCTGTTTCCACCAGACAGTCCAGTTCAGTGTCTCTTCCTCTGTTAGCCCA
AGTCTCCATGGCTTTTGTCTCCTGAGCATGTTGACCACAACAGAAAGGCCTCCACCCTGCATAG
CCACATAGCCAGTGTGGGGTGTGCTGTGTGCACAGTGCCCTCAGGTGTGCATGTCAGAGGAGGA
GGCTTATGTGTGATTGCACTTTTTTCCTCCCCTTCTTCCTAGGCCCTGAGACAGCTAGGTGCCT
GGCTCTCCTCTTTGCCCCTTTAGTTTCCTATAAATGTCTATTGTATGTGTATCTTTGCAATTGT
AAATAACAGCCTTTTTTTTCTGTCCCTAGCATGTTCAACCAGTTAGAGAGAGCCAGGCAGCAGC
CCAGCTCAGGGCCATGATTGTTTATGTCCCACTGGCAGGGAGGTCTCCCAGACTCCAGCTCTGT
CAAGCTCCAGGGCCCGCCTCTGAAGCCTTGGCCACTTCTCCCTTCTTGTTGTCAGGAGACACCC
CTGCAGGGTTCCCCAGCCCTTCCCCACCTGCCCCATAGAAACAAATACAGCAGGTACGGATCTC
AAAACAGACCCCGAGAGAGATGTGGAGTGGATTGCTGGAGTCCCTGAGTTAAGTCAGGGCTCTT
CCTTCCCCAGGGGCCACAGCACCATTGCCTCATCACCCTGTCCTCACGCCACTCCCCACGATGA
ACATACACACTGTGCTAGGTGTATATATACATATATATAAATATATATAATATATAAAATACAG
ATATGGAAATGACTGTTTTGCTGTTAAAATAATGTATACTCTTATTTTCTTCCTTTCATGGTTA
AGATTTTTTTAAAGAAAAGTTAAATATTC

hide sequence

RefSeq Acc Id:

XM_039103176 ⟹ XP_038959104

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	175,372,269 - 175,493,852 (+)	NCBI
mRatBN7.2	2	173,074,385 - 173,195,962 (+)	NCBI

RefSeq Acc Id:

XM_039103177 ⟹ XP_038959105

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	175,372,269 - 175,493,852 (+)	NCBI
mRatBN7.2	2	173,074,383 - 173,195,962 (+)	NCBI

RefSeq Acc Id:

XM_039103178 ⟹ XP_038959106

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	175,372,269 - 175,493,852 (+)	NCBI
mRatBN7.2	2	173,074,383 - 173,195,962 (+)	NCBI

RefSeq Acc Id:

XM_039103179 ⟹ XP_038959107

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	175,372,269 - 175,493,852 (+)	NCBI
mRatBN7.2	2	173,074,383 - 173,195,962 (+)	NCBI

RefSeq Acc Id:

XM_039103180 ⟹ XP_038959108

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	175,372,269 - 175,493,852 (+)	NCBI
mRatBN7.2	2	173,074,385 - 173,195,962 (+)	NCBI

RefSeq Acc Id:

XM_039103181 ⟹ XP_038959109

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	175,372,269 - 175,493,852 (+)	NCBI
mRatBN7.2	2	173,074,385 - 173,195,962 (+)	NCBI

RefSeq Acc Id:

XM_039103182 ⟹ XP_038959110

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	175,372,269 - 175,493,852 (+)	NCBI
mRatBN7.2	2	173,074,383 - 173,195,962 (+)	NCBI

RefSeq Acc Id:

XM_039103183 ⟹ XP_038959111

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	175,372,269 - 175,493,852 (+)	NCBI
mRatBN7.2	2	173,074,383 - 173,195,962 (+)	NCBI

RefSeq Acc Id:

XM_039103184 ⟹ XP_038959112

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	175,372,269 - 175,493,852 (+)	NCBI
mRatBN7.2	2	173,074,385 - 173,195,962 (+)	NCBI

RefSeq Acc Id:

XM_039103185 ⟹ XP_038959113

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	175,372,269 - 175,493,852 (+)	NCBI
mRatBN7.2	2	173,074,384 - 173,195,962 (+)	NCBI

RefSeq Acc Id:

XM_039103186 ⟹ XP_038959114

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	175,372,269 - 175,493,852 (+)	NCBI
mRatBN7.2	2	173,074,383 - 173,195,962 (+)	NCBI

RefSeq Acc Id:

XM_039103187 ⟹ XP_038959115

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	175,372,269 - 175,493,852 (+)	NCBI
mRatBN7.2	2	173,074,383 - 173,195,962 (+)	NCBI

RefSeq Acc Id:

XM_039103188 ⟹ XP_038959116

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	175,372,269 - 175,493,852 (+)	NCBI
mRatBN7.2	2	173,074,385 - 173,195,962 (+)	NCBI

RefSeq Acc Id:

XM_039103189 ⟹ XP_038959117

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	175,372,269 - 175,493,852 (+)	NCBI
mRatBN7.2	2	173,074,385 - 173,195,962 (+)	NCBI

RefSeq Acc Id:

XM_063282598 ⟹ XP_063138668

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	175,372,269 - 175,493,852 (+)	NCBI

RefSeq Acc Id:

XM_063282599 ⟹ XP_063138669

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	175,372,269 - 175,493,852 (+)	NCBI

RefSeq Acc Id:

XM_063282600 ⟹ XP_063138670

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	175,372,269 - 175,493,852 (+)	NCBI

RefSeq Acc Id:

XM_063282601 ⟹ XP_063138671

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	175,372,269 - 175,493,852 (+)	NCBI

RefSeq Acc Id:

XM_063282602 ⟹ XP_063138672

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	175,372,269 - 175,493,852 (+)	NCBI

RefSeq Acc Id:

XM_063282603 ⟹ XP_063138673

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	175,372,269 - 175,493,852 (+)	NCBI

RefSeq Acc Id:

XM_063282604 ⟹ XP_063138674

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	175,372,269 - 175,493,852 (+)	NCBI

RefSeq Acc Id:

XM_063282605 ⟹ XP_063138675

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	175,372,269 - 175,493,852 (+)	NCBI

RefSeq Acc Id:

XM_063282606 ⟹ XP_063138676

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	175,372,269 - 175,488,295 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_076472	(Get FASTA)	NCBI Sequence Viewer
	XP_006232821	(Get FASTA)	NCBI Sequence Viewer
	XP_006232828	(Get FASTA)	NCBI Sequence Viewer
	XP_017446615	(Get FASTA)	NCBI Sequence Viewer
	XP_038959104	(Get FASTA)	NCBI Sequence Viewer
	XP_038959105	(Get FASTA)	NCBI Sequence Viewer
	XP_038959106	(Get FASTA)	NCBI Sequence Viewer
	XP_038959107	(Get FASTA)	NCBI Sequence Viewer
	XP_038959108	(Get FASTA)	NCBI Sequence Viewer
	XP_038959109	(Get FASTA)	NCBI Sequence Viewer
	XP_038959110	(Get FASTA)	NCBI Sequence Viewer
	XP_038959111	(Get FASTA)	NCBI Sequence Viewer
	XP_038959112	(Get FASTA)	NCBI Sequence Viewer
	XP_038959113	(Get FASTA)	NCBI Sequence Viewer
	XP_038959114	(Get FASTA)	NCBI Sequence Viewer
	XP_038959115	(Get FASTA)	NCBI Sequence Viewer
	XP_038959116	(Get FASTA)	NCBI Sequence Viewer
	XP_038959117	(Get FASTA)	NCBI Sequence Viewer
	XP_063138668	(Get FASTA)	NCBI Sequence Viewer
	XP_063138669	(Get FASTA)	NCBI Sequence Viewer
	XP_063138670	(Get FASTA)	NCBI Sequence Viewer
	XP_063138671	(Get FASTA)	NCBI Sequence Viewer
	XP_063138672	(Get FASTA)	NCBI Sequence Viewer
	XP_063138673	(Get FASTA)	NCBI Sequence Viewer
	XP_063138674	(Get FASTA)	NCBI Sequence Viewer
	XP_063138675	(Get FASTA)	NCBI Sequence Viewer
	XP_063138676	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAG28597	(Get FASTA)	NCBI Sequence Viewer
	EDM00775	(Get FASTA)	NCBI Sequence Viewer
	EDM00776	(Get FASTA)	NCBI Sequence Viewer
	EDM00777	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000020717
	ENSRNOP00000070996
	ENSRNOP00000083614
	ENSRNOP00000086176
	ENSRNOP00000086384
	ENSRNOP00000088812
	ENSRNOP00000108218
GenBank Protein	Q9ES67	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_076472 ⟸ NM_023982

- UniProtKB:

Q9ES67 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MSIRLPHSIDRSASKKQSHLSSPIASWLSSLSSLGDSTPERTSPSHHRQPSDTSETTAGLVQRC
VIIQKDQHGFGFTVSGDRIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHLEVVKLIKS
GAYAALTLLGSSPPSVGVSGLQQNPSVAGVLRVNPIIPPPPPPPPLPPPQHITGPKPLQDPEVQ
KHATQILWNMLRQEEEELQDILPPCGETSQRTCEGRLSVDSQEADSGLDSGTERFPSISESLMN
RNSVLSDPGLDSPQTSPVILARVAQHHRRQGSDAALLPLNHQGIDQSPKPLIIGPEEDYDPGYF
NNESDIIFQDLEKLKSHPAYLVVFLRYILSQADPGPLLFYLCSEVYQQTNPKDSRSLGKDIWNI
FLEKNAPLRVKIPEMLQAEIDLRLRNNEDPRNVLCEAQEAVMLEIQEQINDYRSKRTLGLGSLY
GENDLLGLDGDPLRERQMAEKQLAALGDILSKYEEDRSAPMDFAVNTFMSHAGIRLRESRSSCT
AEKTQSAPDKDKWLPFFPKTKKQSSNSKKEKDALEDKKRNPILRYIGKPKSSSQSIKPGNVRNI
IQHFENSHQYDVPEPGTQRLSTGSFPEDLLESDSSRSEIRLGRSGSLKGREEMKRSRKAENVPR
PRSDVDMDAAAEAARLHQSASSSASSLSTRSLENPTPPFTPKMGRRSIESPNLGFCTDVILPHL
LEDDLGQLSDLEPEPEVQNWQHTVGKDVVANLTQREIDRQEVINELFVTEASHLRTLRVLDLIF
YQRMRKENLMPREELARLFPNLPELIEIHNSWCEAMKKLREEGPIIRDISDPMLARFDGPAREE
LQQVAAQFCSYQSVALELIRTKQRKESRFQLFMQEAESHPQCRRLQLRDLIVSEMQRLTKYPLL
LENIIKHTEGGTSEHEKLCRARDQCREILKFVNEAVKQTENRHRLEGYQKRLDATALERASNPL
AAEFKSLDLTTRKMIHEGPLTWRISKDKTLDLQVLLLEDLVVLLQRQEERLLLKCHSKTAVGSS
DSKQTFSPVLKLNAVLIRSVATDKRAFFIICTSELGPPQIYELVALTSSDKNIWMELLEEAVQN
ATKHPGAAPIPIHPSPPGSQEPAYQGSTSSRVEINDSEVYHTEKEPKKLPEGPGPEQRVQDKQL
IAQGEPVQEEDEEELRTLPRAPPSLDGENRGIRTRDPVLLALTGPLLMEGLADAALEDVENLRH
LILWSLLPGHTVKTQAAGEPEDDLTPTPSVVSITSHPWDPGSPGQAPTISDSTRLARPEGSQPE
GEDVAVSSLAHLPPRTRSSGVWDSPELDRNPAAEAASTEPAASYKVVRKVSLLPGGGVGAAKVA
GSNAIPDSGQSESELSEVEGGAQATGNCFYVSMPAGPLDSSTEPTGTPPSPSQCHSLPAWPTEP
QPYRGVRGGQCSSLVRRDVDVIFHTIEQLTIKLHRLKDMELAHRELLKSLGGESSGGTTPVGSF
HTEAARWTDYSLSPPAKEALASDSQNGQEQGSCPEEGSDIALEDSATDTAVSPGP

hide sequence

RefSeq Acc Id:	XP_006232821 ⟸ XM_006232759
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6AAM2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSIRLPHSIDRSASKKQSHLSSPIASWLSSLSSLGDSTPERTSPSHHRQPSDTSETTAGLVQRC VIIQKDQHGFGFTVSGDRIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHLEVVKLIKS GAYAALTLLGSSPPSVGVSGLQQNPSVAGVPRVNPIIPPPPPPPPLPPPQHITGPKPLQDPEVQ KHATQILRNMLRQEEKELQRIYEVYSRNPASLLEEQMEGARRRVTQLQLKIQQETGGLVDILPP CGETSQRTCEGRLSVDSQEADSGLDSGTERFPSISESLMNRNSVLSDPGLDSPQTSPVILARVA QHHRRQGSDAALLPLNHQGIDQSPKPLIIGPEEDYDPGYFNNESDIIFQDLEKLKSHPAYLVVF LRYIFSQADPGPLLFYLCSEVYQQTNPKDSRSLGKDIWNIFLEKNAPLRVKIPEMLQAEIDLRL RNNEDPRNVLCEAQEAVMLEIQEQINDYRSKRTLGLGSLYGENDLLGLDGDPLRERQMAEKQLA ALGDILSKYEEDRSAPMDFAVNTFMSHAGIRLRESRSSCTAEKTQSAPDKDKWLPFFPKTKKQS SNSKKEKDALEDKKRNPILRYIGKPKSSSQSTFHIPLSPVEVKPGNVRNIIQHFENSHQYDVPE PGTQRLSTGSFPEDLLESDSSRSEIRLGRSESLKGREEMKRSRKAENVPRSRSDVDMDAAAEAA RLHQSASSSASSLSTRSLENPTPPFTPKMGRRSIESPNLGFCTDVILPHLLEDDLGQLSDLEPE PEVQNWQHTVGKDVVANLTQREIDRQEVINELFVTEASHLRTLRVLDLIFYQRMRKENLMPREE LARLFPNLPELIEIHNSWCEAMKKLREEGPIIRDISDLMLARFDGPAREELQQVAAQFCSYQSV ALELIRTKQRKESRFQLFMQEAESHPQCRRLQLRDLIVSEMQRLTKYPLLLENIIKHTEGGTSE HEKLCRARDQCREILKFVNEAVKQTENRHRLEGYQKRLDATALERASNPLAAEFKSLDLTTRKM IHEGPLTWRISKDKTLDLQVLLLEDLVVLLQRQEERLLLKCHSKTAVGSSDSKQTFSPVLKLNA VLIRSVATDKRAFFIICTSELGPPQIYELVALTSSDKNIWMELLEEAVQNATKHPGAAPIPIHP SPPGSQEPAYQGSTSSRVEINDSEVYHTEKEPKKLPEGPGPEQRVQDKQLIAQGEPVQEEDEEE LRTLPRAPPSLDGENRGIRTRDPVLLALTGPLLMEGLADAALEDVENLRHLILWSLLPGHTVKT QAAGEPEDDLTPTPSVVSITSHPWDPGSPGQAPTISDSTRLARPEGSQPEGEDVAVSSLAHLPP RTRSSGVWDSPELDRNPAAEAASTEPAASYKVVRKVSLLPGGGVGAAKVAGSNAIPDSGQSESE LSEVEGGAQATGNCFYVSMPAGPLDSSTEPTGTPPSPSQCHSLPAWPTEPQPYRGVRGGQCSSL VRRDVDVIFHTIEQLTIKLHRLKDMELAHRELLKSLGGESSGGTTPVGSFHTEAARWTDYSLSP PAKEALASDSQNGQEQGSCPEEGSDIALEDSATDTAVSPGP hide sequence

RefSeq Acc Id:	XP_006232828 ⟸ XM_006232766
- Peptide Label:	isoform X11
- UniProtKB:	A0A8I6A5B5 (UniProtKB/TrEMBL), A0A8I6AAM2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSIRLPHSIDRLSSLSSLGDSTPERTSPSHHRQPSDTSETTAGLVQRCVIIQKDQHGFGFTVSG DRIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHLEVVKLIKSGAYAALTLLGSSPPSV GVSGLQQNPSVAGVPRVNPIIPPPPPPPPLPPPQHITGPKPLQDPEVQKHATQILRNMLRQEEK ELQRIYEVYSRNPASLLEEQMEGARRRVTQLQLKIQQETGGLVDILPPCGETSQRTCEGRLSVD SQEADSGLDSGTERFPSISESLMNRNSVLSDPGLDSPQTSPVILARVAQHHRRQGSDAALLPLN HQGIDQSPKPLIIGPEEDYDPGYFNNESDIIFQDLEKLKSHPAYLVVFLRYIFSQADPGPLLFY LCSEVYQQTNPKDSRSLGKDIWNIFLEKNAPLRVKIPEMLQAEIDLRLRNNEDPRNVLCEAQEA VMLEIQEQINDYRSKRTLGLGSLYGENDLLGLDGDPLRERQMAEKQLAALGDILSKYEEDRSAP MDFAVNTFMSHAGIRLRESRSSCTAEKTQSAPDKDKWLPFFPKTKKQSSNSKKEKDALEDKKRN PILRYIGKPKSSSQSTFHIPLSPVEVKPGNVRNIIQHFENSHQYDVPEPGTQRLSTGSFPEDLL ESDSSRSEIRLGRSESLKGREEMKRSRKAENVPRSRSDVDMDAAAEAARLHQSASSSASSLSTR SLENPTPPFTPKMGRRSIESPNLGFCTDVILPHLLEDDLGQLSDLEPEPEVQNWQHTVGKDVVA NLTQREIDRQEVINELFVTEASHLRTLRVLDLIFYQRMRKENLMPREELARLFPNLPELIEIHN SWCEAMKKLREEGPIIRDISDLMLARFDGPAREELQQVAAQFCSYQSVALELIRTKQRKESRFQ LFMQEAESHPQCRRLQLRDLIVSEMQRLTKYPLLLENIIKHTEGGTSEHEKLCRARDQCREILK FVNEAVKQTENRHRLEGYQKRLDATALERASNPLAAEFKSLDLTTRKMIHEGPLTWRISKDKTL DLQVLLLEDLVVLLQRQEERLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSVATDKRAFFII CTSELGPPQIYELVALTSSDKNIWMELLEEAVQNATKHPGAAPIPIHPSPPGSQEPAYQGSTSS RVEINDSEVYHTEKEPKKLPEGPGPEQRVQDKQLIAQGEPVQEEDEEELRTLPRAPPSLDGENR GIRTRDPVLLALTGPLLMEGLADAALEDVENLRHLILWSLLPGHTVKTQAAGEPEDDLTPTPSV VSITSHPWDPGSPGQAPTISDSTRLARPEGSQPEGEDVAVSSLAHLPPRTRSSGVWDSPELDRN PAAEAASTEPAASYKVVRKVSLLPGGGVGAAKVAGSNAIPDSGQSESELSEVEGGAQATGNCFY VSMPAGPLDSSTEPTGTPPSPSQCHSLPAWPTEPQPYRGVRGGQCSSLVRRDVDVIFHTIEQLT IKLHRLKDMELAHRELLKSLGGESSGGTTPVGSFHTEAARWTDYSLSPPAKEALASDSQNGQEQ GSCPEEGSDIALEDSATDTAVSPGP hide sequence

RefSeq Acc Id:	XP_017446615 ⟸ XM_017591126
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I6AAM2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSIRLPHSIDRSASKKQSHLSRLSSLSSLGDSTPERTSPSHHRQPSDTSETTAGLVQRCVIIQK DQHGFGFTVSGDRIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHLEVVKLIKSGAYAA LTLLGSSPPSVGVSGLQQNPSVAGVPRVNPIIPPPPPPPPLPPPQHITGPKPLQDPEVQKHATQ ILRNMLRQEEKELQRIYEVYSRNPASLLEEQMEGARRRVTQLQLKIQQETGGLVDILPPCGETS QRTCEGRLSVDSQEADSGLDSGTERFPSISESLMNRNSVLSDPGLDSPQTSPVILARVAQHHRR QGSDAALLPLNHQGIDQSPKPLIIGPEEDYDPGYFNNESDIIFQDLEKLKSHPAYLVVFLRYIF SQADPGPLLFYLCSEVYQQTNPKDSRSLGKDIWNIFLEKNAPLRVKIPEMLQAEIDLRLRNNED PRNVLCEAQEAVMLEIQEQINDYRSKRTLGLGSLYGENDLLGLDGDPLRERQMAEKQLAALGDI LSKYEEDRSAPMDFAVNTFMSHAGIRLRESRSSCTAEKTQSAPDKDKWLPFFPKTKKQSSNSKK EKDALEDKKRNPILRYIGKPKSSSQSTFHIPLSPVEVKPGNVRNIIQHFENSHQYDVPEPGTQR LSTGSFPEDLLESDSSRSEIRLGRSESLKGREEMKRSRKAENVPRSRSDVDMDAAAEAARLHQS ASSSASSLSTRSLENPTPPFTPKMGRRSIESPNLGFCTDVILPHLLEDDLGQLSDLEPEPEVQN WQHTVGKDVVANLTQREIDRQEVINELFVTEASHLRTLRVLDLIFYQRMRKENLMPREELARLF PNLPELIEIHNSWCEAMKKLREEGPIIRDISDLMLARFDGPAREELQQVAAQFCSYQSVALELI RTKQRKESRFQLFMQEAESHPQCRRLQLRDLIVSEMQRLTKYPLLLENIIKHTEGGTSEHEKLC RARDQCREILKFVNEAVKQTENRHRLEGYQKRLDATALERASNPLAAEFKSLDLTTRKMIHEGP LTWRISKDKTLDLQVLLLEDLVVLLQRQEERLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRS VATDKRAFFIICTSELGPPQIYELVALTSSDKNIWMELLEEAVQNATKHPGAAPIPIHPSPPGS QEPAYQGSTSSRVEINDSEVYHTEKEPKKLPEGPGPEQRVQDKQLIAQGEPVQEEDEEELRTLP RAPPSLDGENRGIRTRDPVLLALTGPLLMEGLADAALEDVENLRHLILWSLLPGHTVKTQAAGE PEDDLTPTPSVVSITSHPWDPGSPGQAPTISDSTRLARPEGSQPEGEDVAVSSLAHLPPRTRSS GVWDSPELDRNPAAEAASTEPAASYKVVRKVSLLPGGGVGAAKVAGSNAIPDSGQSESELSEVE GGAQATGNCFYVSMPAGPLDSSTEPTGTPPSPSQCHSLPAWPTEPQPYRGVRGGQCSSLVRRDV DVIFHTIEQLTIKLHRLKDMELAHRELLKSLGGESSGGTTPVGSFHTEAARWTDYSLSPPAKEA LASDSQNGQEQGSCPEEGSDIALEDSATDTAVSPGP hide sequence

Ensembl Acc Id:

ENSRNOP00000020717 ⟸ ENSRNOT00000020717

Ensembl Acc Id:

ENSRNOP00000070996 ⟸ ENSRNOT00000091336

RefSeq Acc Id:	XP_038959105 ⟸ XM_039103177
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6AAM2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038959106 ⟸ XM_039103178
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I6AAM2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038959110 ⟸ XM_039103182
- Peptide Label:	isoform X9
- UniProtKB:	Q9ES67 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_038959114 ⟸ XM_039103186
- Peptide Label:	isoform X18
- UniProtKB:	Q9ES67 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_038959115 ⟸ XM_039103187
- Peptide Label:	isoform X19
- UniProtKB:	Q9ES67 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_038959107 ⟸ XM_039103179
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I6AAM2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038959111 ⟸ XM_039103183
- Peptide Label:	isoform X13
- UniProtKB:	A0A8I6AAM2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038959113 ⟸ XM_039103185
- Peptide Label:	isoform X16
- UniProtKB:	A0A8I6AAM2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038959108 ⟸ XM_039103180
- Peptide Label:	isoform X7
- UniProtKB:	Q9ES67 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_038959104 ⟸ XM_039103176
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6AAM2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038959109 ⟸ XM_039103181
- Peptide Label:	isoform X8
- UniProtKB:	Q9ES67 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_038959116 ⟸ XM_039103188
- Peptide Label:	isoform X20
- UniProtKB:	A0A8I6AAM2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038959112 ⟸ XM_039103184
- Peptide Label:	isoform X17
- UniProtKB:	Q9ES67 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_038959117 ⟸ XM_039103189
- Peptide Label:	isoform X25
- UniProtKB:	Q9ES67 (UniProtKB/Swiss-Prot)

Ensembl Acc Id:

ENSRNOP00000083614 ⟸ ENSRNOT00000119098

Ensembl Acc Id:

ENSRNOP00000086384 ⟸ ENSRNOT00000106820

Ensembl Acc Id:

ENSRNOP00000088812 ⟸ ENSRNOT00000116714

Ensembl Acc Id:

ENSRNOP00000086176 ⟸ ENSRNOT00000114540

RefSeq Acc Id:	XP_063138668 ⟸ XM_063282598
- Peptide Label:	isoform X10
- UniProtKB:	Q9ES67 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_063138670 ⟸ XM_063282600
- Peptide Label:	isoform X14
- UniProtKB:	A0A8I6A8L7 (UniProtKB/TrEMBL), A0A8I6AAM2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063138669 ⟸ XM_063282599
- Peptide Label:	isoform X12
- UniProtKB:	A0A8I6AAM2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063138671 ⟸ XM_063282601
- Peptide Label:	isoform X15
- UniProtKB:	A0A8I6AAM2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063138672 ⟸ XM_063282602
- Peptide Label:	isoform X21
- UniProtKB:	Q9ES67 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_063138674 ⟸ XM_063282604
- Peptide Label:	isoform X23
- UniProtKB:	Q9ES67 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_063138673 ⟸ XM_063282603
- Peptide Label:	isoform X22
- UniProtKB:	Q9ES67 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_063138675 ⟸ XM_063282605
- Peptide Label:	isoform X24
- UniProtKB:	Q9ES67 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_063138676 ⟸ XM_063282606
- Peptide Label:	isoform X26

Ensembl Acc Id:

ENSRNOP00000108218 ⟸ ENSRNOT00000157908

Protein Domains

DH PDZ PH RGS RGSL

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9ES67-F1-model_v2	AlphaFold	Q9ES67	1-1527	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:619705	AgrOrtholog
BioCyc Gene	G2FUF-52538	BioCyc
Ensembl Genes	ENSRNOG00000015026	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000020717	ENTREZGENE
	ENSRNOT00000091336	ENTREZGENE
	ENSRNOT00000106820	ENTREZGENE
	ENSRNOT00000114540	ENTREZGENE
	ENSRNOT00000116714	ENTREZGENE
	ENSRNOT00000119098	ENTREZGENE
	ENSRNOT00000157908	ENTREZGENE
Gene3D-CATH	1.10.167.10	UniProtKB/Swiss-Prot
	1.20.900.10	UniProtKB/Swiss-Prot
	2.30.29.30	UniProtKB/Swiss-Prot
	2.30.42.10	UniProtKB/Swiss-Prot
InterPro	DBL_dom_sf	UniProtKB/Swiss-Prot
	DH-domain	UniProtKB/Swiss-Prot
	GDS_CDC24_CS	UniProtKB/Swiss-Prot
	PDZ	UniProtKB/Swiss-Prot
	PDZ_sf	UniProtKB/Swiss-Prot
	PDZRhoGEF_RGS	UniProtKB/Swiss-Prot
	PH-like_dom_sf	UniProtKB/Swiss-Prot
	PH_16	UniProtKB/Swiss-Prot
	PH_domain	UniProtKB/Swiss-Prot
	PRG_PH	UniProtKB/Swiss-Prot
	RGS	UniProtKB/Swiss-Prot
	RGS-like_dom	UniProtKB/Swiss-Prot
	RGS_sf	UniProtKB/Swiss-Prot
	RGS_subdomain_2	UniProtKB/Swiss-Prot
KEGG Report	rno:78966	UniProtKB/Swiss-Prot
NCBI Gene	78966	ENTREZGENE
PANTHER	PTHR45872:SF1	UniProtKB/Swiss-Prot
	RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 2, ISOFORM D	UniProtKB/Swiss-Prot
Pfam	PDZ	UniProtKB/Swiss-Prot
	PH_16	UniProtKB/Swiss-Prot
	RGS-like	UniProtKB/Swiss-Prot
	RhoGEF	UniProtKB/Swiss-Prot
PhenoGen	Arhgef11	PhenoGen
PROSITE	DH_1	UniProtKB/Swiss-Prot
	DH_2	UniProtKB/Swiss-Prot
	PDZ	UniProtKB/Swiss-Prot
	PH_DOMAIN	UniProtKB/Swiss-Prot
	RGS	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000015026	RatGTEx
SMART	PDZ	UniProtKB/Swiss-Prot
	RGS	UniProtKB/Swiss-Prot
	RhoGEF	UniProtKB/Swiss-Prot
	SM00233	UniProtKB/Swiss-Prot
Superfamily-SCOP	PH domain-like	UniProtKB/Swiss-Prot
	SSF48065	UniProtKB/Swiss-Prot
	SSF48097	UniProtKB/Swiss-Prot
	SSF50156	UniProtKB/Swiss-Prot
UniProt	A0A0G2JZC6_RAT	UniProtKB/TrEMBL
	A0A8I5ZXJ6_RAT	UniProtKB/TrEMBL
	A0A8I6A5B5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A8L7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AAM2	ENTREZGENE, UniProtKB/TrEMBL
	A6J612_RAT	UniProtKB/TrEMBL
	A6J613_RAT	UniProtKB/TrEMBL
	A6J614_RAT	UniProtKB/TrEMBL
	ARHGB_RAT	UniProtKB/Swiss-Prot
	F1LQS9_RAT	UniProtKB/TrEMBL
	Q9ES67	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-11-19	Arhgef11	Rho guanine nucleotide exchange factor 11	Arhgef11	Rho guanine nucleotide exchange factor (GEF) 11	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2004-09-10	Arhgef11	Rho guanine nucleotide exchange factor (GEF) 11	Gtrap48	RhoGEF glutamate transport modulator GTRAP48	Symbol and Name updated	1299863	APPROVED
2002-08-07	Gtrap48	RhoGEF glutamate transport modulator GTRAP48			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar