Spetex2el9 (Spetex-2E protein like 9) - Rat Genome Database

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Gene: Spetex2el9 (Spetex-2E protein like 9) Rattus norvegicus
Analyze
Symbol: Spetex2el9
Name: Spetex-2E protein like 9
RGD ID: 41298228
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC120094618; uncharacterized LOC120094618; uncharacterized protein LOC120094618; uncharacterized protein Spetex2el9
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr893,352,438 - 3,366,609 (+)NCBIGRCr8
mRatBN7.293,115,753 - 3,129,689 (+)NCBImRatBN7.2mRatBN7.2
Cytogenetic Map9q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

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Variants in Spetex2el9
149 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10054141Gmadr4Adrenal mass QTL 42.450.0074adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)9114209783Rat
70226Eae4Experimental allergic encephalomyelitis QTL 4nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)9125661317Rat
9589055Scfw5Subcutaneous fat weight QTL 55.550.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)9137999212Rat
7411592Foco8Food consumption QTL 87.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)9137999212Rat
9589158Gluco65Glucose level QTL 656.820.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)9137999212Rat
1300124Cm4Cardiac mass QTL 43.55heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)9140594091Rat
1298088Edpm11Estrogen-dependent pituitary mass QTL 112.5pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)9143718459Rat
1641911Alcrsp13Alcohol response QTL 13response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)9143718459Rat
10054125Srcrt7Stress Responsive Cort QTL 73.330.0011blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)9187073594Rat
1331757Cdexp1CD45RC expression in CD8 T cells QTL 14.3CD8-positive T cell quantity (VT:0008077)blood CD45RC(high) CD8 T cell count to CD45RC(low) CD8 T cell count ratio (CMO:0001990)9102453767509080Rat
1354650Despr5Despair related QTL 54.010.0017locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)9125408446254084Rat
2303559Gluco54Glucose level QTL 542blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)9125408446254084Rat
631533Iresp3Immunoglobin response QTL316.2blood immunoglobulin E amount (VT:0002492)serum immunoglobulin E level (CMO:0002101)927457995857951Rat


Expression


Sequence


RefSeq Acc Id: XM_039084392   ⟹   XP_038940320
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr893,352,438 - 3,366,609 (+)NCBI
mRatBN7.293,115,753 - 3,129,689 (+)NCBI
RefSeq Acc Id: XM_039084393   ⟹   XP_038940321
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr893,352,455 - 3,366,609 (+)NCBI
mRatBN7.293,115,756 - 3,129,683 (+)NCBI
Protein Sequences
Protein RefSeqs XP_038940320 (Get FASTA)   NCBI Sequence Viewer  
  XP_038940321 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_038940320   ⟸   XM_039084392
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038940321   ⟸   XM_039084393
- Peptide Label: isoform X2


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-28442 BioCyc
NCBI Gene LOC120094618 ENTREZGENE
PhenoGen Spetex2el9 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-10-16 Spetex2el9  Spetex-2E protein like 9  Spetex2el1  Spetex-2E protein like 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2023-09-19 Spetex2el1  Spetex-2E protein like 1  LOC120094618  uncharacterized LOC120094618  Symbol and Name Changed 1299863 APPROVED
2021-01-27 LOC120094618  uncharacterized LOC120094618      Symbol and Name status set to provisional 70820 PROVISIONAL