Or4k1l1 (olfactory receptor family 4 subfamily K member 1 like 1) - Rat Genome Database

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Gene: Or4k1l1 (olfactory receptor family 4 subfamily K member 1 like 1) Rattus norvegicus
Analyze
No known orthologs.
Symbol: Or4k1l1
Name: olfactory receptor family 4 subfamily K member 1 like 1
RGD ID: 41029303
Description: Predicted to enable G protein-coupled receptor activity and olfactory receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway and detection of chemical stimulus involved in sensory perception of smell. Predicted to be located in plasma membrane. Orthologous to human OR4K1 (olfactory receptor family 4 subfamily K member 1).
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC120097126; olfactory receptor 4K1
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81525,771,096 - 25,772,031 (-)NCBIGRCr8GRCr8GRCr8
mRatBN7.21523,291,514 - 23,292,449 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1523,288,995 - 23,294,564 (-)EnsemblmRatBN7.2
Cytogenetic Map15p14NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Genomics

Variants

.
Variants in Or4k1l1
4 total Variants

QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1331729Rf42Renal function QTL 423.071kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)151736289773690657Rat
1641887Alcrsp14Alcohol response QTL 14response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)15142356671Rat
10755503Bp391Blood pressure QTL 3912.37arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)152024860037896129Rat
1578646Bmd18Bone mineral density QTL 185.2femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)152280624098288169Rat
9589149Insul29Insulin level QTL 299.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)15134723002Rat
1578647Bmd17Bone mineral density QTL 174femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)152280624098288169Rat
10401805Kidm51Kidney mass QTL 51kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1530632945306329Rat
2317750Glom26Glomerulus QTL 264.3urine protein amount (VT:0005160)urine protein level (CMO:0000591)151249614165205939Rat
2298549Neuinf12Neuroinflammation QTL 123.5nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)15155302115Rat
8552920Pigfal8Plasma insulin-like growth factor 1 level QTL 83blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)15134723002Rat
2293688Bss29Bone structure and strength QTL 295.310.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)151111114256111142Rat
5685002Bss103Bone structure and strength QTL 1032.8tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)151448116528469888Rat
8694361Abfw6Abdominal fat weight QTL 610.20.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)15134723002Rat
631273Lecl2Lens clarity QTL 20.001lens clarity trait (VT:0001304)age of onset/diagnosis of cataract (CMO:0001584)151059608955596089Rat
2300167Bmd63Bone mineral density QTL 635.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)151111114256111142Rat
731170Pur3Proteinuria QTL 32.30.0005urine protein amount (VT:0005160)urine protein excretion rate (CMO:0000759)15141686771Rat
738017Hcas7Hepatocarcinoma susceptibility QTL 72.91liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)15226636846921453Rat
10054130Srcrt8Stress Responsive Cort QTL 82.180.0085blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)152211793367117933Rat
2300173Bmd62Bone mineral density QTL 6212.80.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)151111114256111142Rat
2324620Coatc3Coat color QTL 3coat/hair pigmentation trait (VT:0010463)pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)151985656646187442Rat
61424Scl1Serum cholesterol level QTL 17.70.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)151672552880672115Rat
1582251Gluco24Glucose level QTL 243.20.0008blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)15553075650530756Rat
1354657Despr13Despair related QTL 130.0022locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)15129912054Rat
631550Bw7Body weight QTL 73.6body mass (VT:0001259)body weight (CMO:0000012)151985656634924750Rat
1578660Bss19Bone structure and strength QTL 194.3femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)152280624098288169Rat


Expression

RNA-SEQ Expression

ectoderm
mesenchyme
nervous system
renal system
sensory system
visual system
1 4 1 4 1 1

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_039094054 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000099465   ⟹   ENSRNOP00000080011
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1523,288,995 - 23,294,564 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000107281   ⟹   ENSRNOP00000093512
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1523,288,995 - 23,294,564 (-)Ensembl
RefSeq Acc Id: XM_039094054   ⟹   XP_038949982
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81525,771,096 - 25,772,031 (-)NCBI
mRatBN7.21523,291,514 - 23,292,449 (-)NCBI
Protein Sequences
Protein RefSeqs XP_038949982 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000101676
RefSeq Acc Id: XP_038949982   ⟸   XM_039094054
- UniProtKB: A0A8I5ZNT4 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000080011   ⟸   ENSRNOT00000099465
Ensembl Acc Id: ENSRNOP00000093512   ⟸   ENSRNOT00000107281

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:41029303 AgrOrtholog
BioCyc Gene G2FUF-14092 BioCyc
Ensembl Genes ENSRNOG00000066061 Ensembl
  ENSRNOG00000082236 ENTREZGENE
Ensembl Transcript ENSRNOT00000154562 ENTREZGENE
NCBI Gene LOC120097126 ENTREZGENE
PhenoGen Or4k1l1 PhenoGen
RatGTEx ENSRNOG00000066061 RatGTEx
  ENSRNOG00000082236 RatGTEx
UniProt A0A8I5ZNT4 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-09-19 Or4k1l1  olfactory receptor family 4 subfamily K member 1 like 1  LOC120097126  olfactory receptor 4K1  Symbol and Name Changed 1299863 APPROVED
2021-01-27 LOC120097126  olfactory receptor 4K1      Symbol and Name status set to provisional 70820 PROVISIONAL