LOC120094463 (small nucleolar RNA SNORA42/SNORA80 family) - Rat Genome Database

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Gene: LOC120094463 (small nucleolar RNA SNORA42/SNORA80 family) Rattus norvegicus
Analyze
Symbol: LOC120094463
Name: small nucleolar RNA SNORA42/SNORA80 family
RGD ID: 41015010
Description:
Type: pseudo (Ensembl: snoRNA)
RefSeq Status: MODEL
Previously known as: AABR07068932.1
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8810,479,459 - 10,479,572 (-)NCBIGRCr8
mRatBN7.282,194,561 - 2,194,674 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl82,194,561 - 2,194,674 (-)NCBImRatBN7.2 Ensembl
mRatBN7.2 Ensembl82,194,561 - 2,194,674 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0 Ensembl82,208,798 - 2,208,911 (-)NCBIRnor6.0rn6Rnor6.0
Cytogenetic Map8q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
71120Niddm21Non-insulin dependent diabetes mellitus QTL 213.73blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)813402289Rat
12880023Bw184Body weight QTL 1840.001body mass (VT:0001259)body weight (CMO:0000012)8209764047097640Rat
9590084Insglur5Insulin/glucose ratio QTL 518.540.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)8124597739Rat
12880028Cm103Cardiac mass QTL 1030.02heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)8209764047097640Rat
12880044Am9Aortic mass QTL 90.007aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)8209764047097640Rat
2317882Alcrsp24Alcohol response QTL 243.20.05response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)8125902202Rat
12880025Cm102Cardiac mass QTL 1020.044heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)8209764047097640Rat


Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide JAXUCZ010000008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000091366
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl82,194,561 - 2,194,674 (-)Ensembl
Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-31828 BioCyc
Ensembl Genes ENSRNOG00000055520 Ensembl
NCBI Gene LOC120094463 ENTREZGENE
PhenoGen LOC120094463 PhenoGen
RatGTEx ENSRNOG00000055520 RatGTEx


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-02 LOC120094463  small nucleolar RNA SNORA42/SNORA80 family  AABR07068932.1    Data merged from RGD:15009525 737654 PROVISIONAL
2021-01-26 LOC120094463  small nucleolar RNA SNORA42/SNORA80 family      Symbol and Name status set to provisional 70820 PROVISIONAL
2019-11-08 AABR07068932.1        Symbol and Name status set to provisional 45752 PROVISIONAL