LOC120095597 (uncharacterized LOC120095597) - Rat Genome Database

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Gene: LOC120095597 (uncharacterized LOC120095597) Rattus norvegicus
Analyze
Symbol: LOC120095597
Name: uncharacterized LOC120095597
RGD ID: 40952789
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: MODEL
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81130,911,385 - 30,997,796 (-)NCBIGRCr8
mRatBN7.21117,424,497 - 17,510,872 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1117,424,492 - 17,510,865 (-)EnsemblmRatBN7.2 Ensembl
Cytogenetic Map11q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in LOC120095597
574 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
634341Bw121Body weight QTL 1213.56abdominal fat pad mass (VT:1000711)abdominal fat pad weight (CMO:0000088)11121836709Rat
1598842Glom10Glomerulus QTL 103.4kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)11135331169Rat
1300147Bp187Blood pressure QTL 1873.67arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)11169446234Rat
1558659Tescar1Testicular tumor resistance QTL 13.9testis integrity trait (VT:0010572)percentage of study population developing testis tumors during a period of time (CMO:0001261)11104193166113562Rat
1641927Alcrsp10Alcohol response QTL 10alcohol metabolism trait (VT:0015089)blood ethanol level (CMO:0000535)11843667453436674Rat
2290451Scl58Serum cholesterol level QTL 583.48blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)111283104625121472Rat
724517Uae18Urinary albumin excretion QTL 183.7urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)111647204744285911Rat


Expression


Sequence


RefSeq Acc Id: ENSRNOT00000108680
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1117,424,492 - 17,510,865 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000115110
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1117,424,492 - 17,507,074 (-)Ensembl
RefSeq Acc Id: XR_005491157
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81130,911,385 - 30,994,595 (-)NCBI
mRatBN7.21117,424,497 - 17,507,722 (-)NCBI
RefSeq Acc Id: XR_005491158
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81130,911,385 - 30,997,796 (-)NCBI
mRatBN7.21117,424,497 - 17,510,872 (-)NCBI
Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-22126 BioCyc
Ensembl Genes ENSRNOG00000066127 Ensembl, ENTREZGENE
NCBI Gene LOC120095597 ENTREZGENE
PhenoGen LOC120095597 PhenoGen
RatGTEx ENSRNOG00000066127 RatGTEx


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-01-26 LOC120095597  uncharacterized LOC120095597      Symbol and Name status set to provisional 70820 PROVISIONAL