LOC119876763 (negative elongation factor E-like) - Rat Genome Database

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Gene: LOC119876763 (negative elongation factor E-like) Canis lupus familiaris
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Symbol: LOC119876763
Name: negative elongation factor E-like
RGD ID: 40922093
Description: ENCODES a protein that exhibits RNA binding (inferred); INVOLVED IN regulation of DNA-templated transcription (inferred); FOUND IN chromosome (inferred); NELF complex (inferred); nucleus (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
NCBI Annotation Information: Annotation category: not annotated on reference assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
UU_Cfam_GSD_1.01114,391,489 - 14,392,688 (-)NCBIUU_Cfam_GSD_1.0


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
chromosome  (IEA)
NELF complex  (IEA)
nucleus  (IEA)

Molecular Function
RNA binding  (IEA)

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_038551606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAAHUQ010000113 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_038551606   ⟹   XP_038407534
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01114,391,489 - 14,392,688 (-)NCBI
Protein Sequences
Protein RefSeqs XP_038407534 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00040022549.1
RefSeq Acc Id: XP_038407534   ⟸   XM_038551606
- UniProtKB: A0A8C0SKV7 (UniProtKB/TrEMBL)
Protein Domains
RRM


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00040013929 UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00040025923.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.70.330 UniProtKB/TrEMBL
InterPro NELFE UniProtKB/TrEMBL
  NELFE_RRM UniProtKB/TrEMBL
  Nucleotide-bd_a/b_plait_sf UniProtKB/TrEMBL
  RBD_domain_sf UniProtKB/TrEMBL
  RRM_dom UniProtKB/TrEMBL
NCBI Gene LOC119876763 ENTREZGENE
PANTHER NEGATIVE ELONGATION FACTOR E UniProtKB/TrEMBL
  NEGATIVE ELONGATION FACTOR E UniProtKB/TrEMBL
Pfam RRM_1 UniProtKB/TrEMBL
PROSITE RRM UniProtKB/TrEMBL
SMART RRM UniProtKB/TrEMBL
Superfamily-SCOP RNA-binding domain, RBD UniProtKB/TrEMBL
UniProt A0A8C0SKV7 ENTREZGENE, UniProtKB/TrEMBL