LOC119868751 (zinc finger X-chromosomal protein-like) - Rat Genome Database

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Gene: LOC119868751 (zinc finger X-chromosomal protein-like) Canis lupus familiaris
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Symbol: LOC119868751
Name: zinc finger X-chromosomal protein-like
RGD ID: 40920794
Description: ENCODES a protein that exhibits DNA binding (inferred); metal ion binding (inferred); zinc ion binding (inferred); INVOLVED IN regulation of DNA-templated transcription (inferred); ASSOCIATED WITH autistic disorder (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Y-linked zinc finger protein; ZFX; ZFY; zinc finger protein ZFX; zinc finger protein ZFY
RGD Orthologs
Human
Bonobo
Pig
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position: No map positions available.


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
chromosome  (IBA)
nucleolus  (ISO)
nucleoplasm  (ISO)
nucleus  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:23788650  


Genomics

Comparative Map Data
LOC119868751
(Canis lupus familiaris - dog)		 No map positions available.
ZFY
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38Y2,935,381 - 2,982,506 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblY2,935,281 - 2,982,506 (+)EnsemblGRCh38hg38GRCh38
GRCh37Y2,803,422 - 2,850,547 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36Y2,863,546 - 2,909,891 (+)NCBINCBI36Build 36hg18NCBI36
Build 34Y2,846,906 - 2,893,252NCBI
CeleraX88,992,656 - 89,040,090 (+)NCBICelera
Cytogenetic MapYp11.2NCBI
HuRefY155,113 - 202,422 (+)NCBIHuRef
T2T-CHM13v2.0Y2,611,525 - 2,659,668 (+)NCBIT2T-CHM13v2.0
ZFY
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2Y44,194,482 - 44,244,809 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1Y2,681,616 - 2,732,517 (+)NCBINHGRI_mPanPan1
LOC100624329
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblY9,874,794 - 9,935,353 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1Y9,874,048 - 9,935,356 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2Y1,324,739 - 1,385,953 (+)NCBISscrofa10.2Sscrofa10.2susScr3


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_038451380 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038451381 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038451382 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038451383 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038451384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038451385 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038451386 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038451387 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038451388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038451389 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038451390 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038451391 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038451392 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038451393 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038451394 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB027765 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF027766 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF393756 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY012088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JX475923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JX964866 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KX065054 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Protein Domains
C2H2-type


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00030010751 UniProtKB/TrEMBL
  ENSCAFG00030025045 UniProtKB/TrEMBL
  ENSCAFG00040009100 UniProtKB/TrEMBL
  ENSCAFG00845020564 ENTREZGENE, UniProtKB/TrEMBL
  ENSCAFG00845030477 UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00030019863.1 UniProtKB/TrEMBL
  ENSCAFT00030046428.1 UniProtKB/TrEMBL
  ENSCAFT00040017591.1 UniProtKB/TrEMBL
  ENSCAFT00845036219 ENTREZGENE
  ENSCAFT00845036219.1 UniProtKB/TrEMBL
  ENSCAFT00845054132.1 UniProtKB/TrEMBL
Gene3D-CATH Classic Zinc Finger UniProtKB/TrEMBL
InterPro Transcrp_activ_Zfx/Zfy-dom UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/TrEMBL
NCBI Gene LOC119868751 ENTREZGENE
PANTHER CHROMATIN-LINKED ADAPTOR FOR MSL PROTEINS, ISOFORM B UniProtKB/TrEMBL
  PR_SET DOMAIN 13 UniProtKB/TrEMBL
  ZINC FINGER PROTEIN UniProtKB/TrEMBL
  ZINC FINGER PROTEIN UniProtKB/TrEMBL
Pfam zf-C2H2 UniProtKB/TrEMBL
  zf-H2C2_5 UniProtKB/TrEMBL
  Zfx_Zfy_act UniProtKB/TrEMBL
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
SMART ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF57667 UniProtKB/TrEMBL
UniProt A0A0G2Y799 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0N0L6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0S3B7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3Q4C5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3S1T2 ENTREZGENE, UniProtKB/TrEMBL