LOC134482125 (PHD finger protein 11-like) - Rat Genome Database

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Gene: LOC134482125 (PHD finger protein 11-like) Rattus norvegicus
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Symbol: LOC134482125
Name: PHD finger protein 11-like
RGD ID: 402367625
Description: Predicted to enable zinc ion binding activity. Predicted to be located in nucleus.
Type: protein-coding
RefSeq Status: VALIDATED
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81537,505,639 - 37,529,267 (-)NCBIGRCr8GRCr8GRCr8




Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
nucleus  (IEA)

Molecular Function

References

Genomics


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_063274869   ⟹   XP_063130939
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81537,505,639 - 37,529,250 (-)NCBI
RefSeq Acc Id: XM_063274870   ⟹   XP_063130940
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81537,505,639 - 37,529,257 (-)NCBI
RefSeq Acc Id: XM_063274871   ⟹   XP_063130941
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81537,506,150 - 37,529,248 (-)NCBI
RefSeq Acc Id: XM_063274872   ⟹   XP_063130942
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81537,505,639 - 37,529,267 (-)NCBI
RefSeq Acc Id: XP_063130942   ⟸   XM_063274872
- Peptide Label: isoform X4
- UniProtKB: A0A8I6AHQ0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063130940   ⟸   XM_063274870
- Peptide Label: isoform X2
- UniProtKB: A0A8I6AHQ0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063130939   ⟸   XM_063274869
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063130941   ⟸   XM_063274871
- Peptide Label: isoform X3
Protein Domains
PHD-type

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSRNOG00000021680 UniProtKB/TrEMBL
  ENSRNOG00000079764 ENTREZGENE
Ensembl Transcript ENSRNOT00000095736.1 UniProtKB/TrEMBL
  ENSRNOT00000120126 ENTREZGENE
Gene3D-CATH Zinc/RING finger domain, C3HC4 (zinc finger) UniProtKB/TrEMBL
InterPro EPHD UniProtKB/TrEMBL
  PHD-type_Zinc_Finger UniProtKB/TrEMBL
  Znf_FYVE_PHD UniProtKB/TrEMBL
  Znf_PHD UniProtKB/TrEMBL
  Znf_RING/FYVE/PHD UniProtKB/TrEMBL
NCBI Gene LOC134482125 ENTREZGENE
PANTHER PHD FINGER PROTEIN UniProtKB/TrEMBL
  PHD FINGER PROTEIN 11 UniProtKB/TrEMBL
Pfam zf-HC5HC2H UniProtKB/TrEMBL
PhenoGen LOC134482125 PhenoGen
PROSITE EPHD UniProtKB/TrEMBL
RatGTEx ENSRNOG00000021680 RatGTEx
  ENSRNOG00000079764 RatGTEx
SMART PHD UniProtKB/TrEMBL
Superfamily-SCOP FYVE/PHD zinc finger UniProtKB/TrEMBL
UniProt A0A8I6AHQ0 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-03-05 LOC134482125  PHD finger protein 11-like      Symbol and Name status set to provisional 70820 PROVISIONAL