LOC134478824 (protein transport protein Sec61 subunit gamma-like) - Rat Genome Database

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Gene: LOC134478824 (protein transport protein Sec61 subunit gamma-like) Rattus norvegicus
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Symbol: LOC134478824
Name: protein transport protein Sec61 subunit gamma-like
RGD ID: 402330899
Description: Predicted to enable protein transmembrane transporter activity. Predicted to be involved in intracellular protein transport; protein targeting; and protein transmembrane transport. Predicted to be located in endoplasmic reticulum membrane.
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8889,588,731 - 89,596,910 (-)NCBIGRCr8
mRatBN7.2 Ensembl880,709,227 - 80,709,505 (-)EnsemblmRatBN7.2 Ensembl


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Genomics


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_063266427 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000092495   ⟹   ENSRNOP00000078988
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl880,709,227 - 80,709,505 (-)Ensembl
RefSeq Acc Id: XM_063266427   ⟹   XP_063122497
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8889,588,731 - 89,596,910 (-)NCBI
Protein Sequences
Protein RefSeqs XP_063122497 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000078988.1
RefSeq Acc Id: XP_063122497   ⟸   XM_063266427
- UniProtKB: A0A8I5ZM65 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000078988   ⟸   ENSRNOT00000092495

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSRNOG00000062056 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000092495.2 UniProtKB/TrEMBL
Gene3D-CATH Preprotein translocase SecE subunit UniProtKB/TrEMBL
InterPro Prot_translocase_SecE_dom_sf UniProtKB/TrEMBL
  Translocase_Sec61-g UniProtKB/TrEMBL
  Translocase_SecE/Sec61-g UniProtKB/TrEMBL
NCBI Gene LOC134478824 ENTREZGENE
PANTHER PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT GAMMA UniProtKB/TrEMBL
  SEC61 GAMMA SUBUNIT UniProtKB/TrEMBL
Pfam SecE UniProtKB/TrEMBL
PhenoGen LOC134478824 PhenoGen
RatGTEx ENSRNOG00000062056 RatGTEx
Superfamily-SCOP Preprotein translocase SecE subunit UniProtKB/TrEMBL
UniProt A0A8I5ZM65 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-03-05 LOC134478824  protein transport protein Sec61 subunit gamma-like      Symbol and Name status set to provisional 70820 PROVISIONAL