CFAP97D1 (CFAP97 domain containing 1) - Rat Genome Database

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Gene: CFAP97D1 (CFAP97 domain containing 1) Homo sapiens
Analyze
Symbol: CFAP97D1
Name: CFAP97 domain containing 1
RGD ID: 3458383
HGNC Page HGNC:37241
Description: Predicted to be involved in sperm axoneme assembly.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: C17orf105; CFAP97 domain-containing protein 1; chromosome 17 open reading frame 105; FLJ43829; hypothetical protein LOC284067; sperm axonemal maintenance protein CFAP97D1; uncharacterized protein C17orf105; uncharacterized protein CFAP97D1
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381743,780,435 - 43,787,620 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1743,780,435 - 43,787,620 (+)EnsemblGRCh38hg38GRCh38
GRCh371741,857,803 - 41,864,988 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361739,213,329 - 39,220,506 (+)NCBINCBI36Build 36hg18NCBI36
Celera1738,565,804 - 38,570,055 (+)NCBICelera
Cytogenetic Map17q21.31NCBI
HuRef1737,621,895 - 37,626,146 (+)NCBIHuRef
CHM1_11742,093,413 - 42,097,664 (+)NCBICHM1_1
T2T-CHM13v2.01744,632,979 - 44,640,164 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
sperm axoneme assembly  (IBA,IEA,ISS)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:21873635   PMID:26186194   PMID:28514442   PMID:30021884   PMID:32296183   PMID:32694731   PMID:32785227  


Genomics

Comparative Map Data
CFAP97D1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381743,780,435 - 43,787,620 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1743,780,435 - 43,787,620 (+)EnsemblGRCh38hg38GRCh38
GRCh371741,857,803 - 41,864,988 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361739,213,329 - 39,220,506 (+)NCBINCBI36Build 36hg18NCBI36
Celera1738,565,804 - 38,570,055 (+)NCBICelera
Cytogenetic Map17q21.31NCBI
HuRef1737,621,895 - 37,626,146 (+)NCBIHuRef
CHM1_11742,093,413 - 42,097,664 (+)NCBICHM1_1
T2T-CHM13v2.01744,632,979 - 44,640,164 (+)NCBIT2T-CHM13v2.0
Cfap97d1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911101,877,882 - 101,883,090 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11101,875,105 - 101,883,090 (+)EnsemblGRCm39 Ensembl
GRCm3811101,987,056 - 101,992,264 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11101,984,279 - 101,992,264 (+)EnsemblGRCm38mm10GRCm38
MGSCv3711101,848,370 - 101,853,578 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3611101,803,144 - 101,808,355 (+)NCBIMGSCv36mm8
Celera11113,692,328 - 113,697,510 (+)NCBICelera
Cytogenetic Map11DNCBI
cM Map1165.48NCBI
Cfap97d1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81087,432,559 - 87,444,711 (+)NCBIGRCr8
mRatBN7.21086,933,585 - 86,944,566 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1086,933,808 - 86,938,244 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1091,963,204 - 91,968,412 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01091,438,807 - 91,443,998 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01086,832,118 - 86,837,309 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01089,918,313 - 89,930,913 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1089,918,373 - 89,923,571 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01089,710,775 - 89,723,402 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41091,045,002 - 91,050,200 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1085,652,983 - 85,658,181 (+)NCBICelera
Cytogenetic Map10q32.1NCBI
Cfap97d1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545117,072,403 - 17,077,128 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495545117,072,403 - 17,077,642 (+)NCBIChiLan1.0ChiLan1.0
CFAP97D1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21921,118,808 - 21,129,398 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11723,083,123 - 23,093,712 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01713,612,308 - 13,618,791 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11713,778,851 - 13,783,284 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1713,779,785 - 13,783,284 (-)Ensemblpanpan1.1panPan2
CFAP97D1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1919,500,889 - 19,517,607 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl919,513,502 - 19,517,129 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha918,890,095 - 18,907,163 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0920,196,092 - 20,213,236 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl920,196,095 - 20,212,413 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1919,048,704 - 19,065,799 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0919,231,898 - 19,248,989 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0919,376,971 - 19,394,066 (-)NCBIUU_Cfam_GSD_1.0
Cfap97d1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560218,849,403 - 18,854,119 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936541340,480 - 344,587 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936541340,509 - 344,587 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CFAP97D1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1219,330,951 - 19,334,824 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11219,330,354 - 19,336,221 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21219,563,989 - 19,568,692 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CFAP97D1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11662,617,060 - 62,621,898 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1662,617,969 - 62,621,424 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607733,390,278 - 33,394,744 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cfap97d1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624795990,511 - 993,904 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in CFAP97D1
3 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 17q21.33-24.2(chr17:36449220-68170214)x3 copy number gain See cases [RCV000050957] Chr17:36449220..68170214 [GRCh38]
Chr17:48563237..65936105 [GRCh37]
Chr17:45918236..63677950 [NCBI36]
Chr17:17q21.33-24.2		 pathogenic
GRCh38/hg38 17q23.2-25.3(chr17:36449220-83086677)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052483]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052483]|See cases [RCV000052483] Chr17:36449220..83086677 [GRCh38]
Chr17:58617905..81044553 [GRCh37]
Chr17:55972687..78637842 [NCBI36]
Chr17:17q23.2-25.3		 pathogenic
GRCh38/hg38 17q12-21.31(chr17:39199873-45629579)x3 copy number gain See cases [RCV000052479] Chr17:39199873..45629579 [GRCh38]
Chr17:37356126..43706945 [GRCh37]
Chr17:34609652..41062728 [NCBI36]
Chr17:17q12-21.31		 pathogenic
GRCh38/hg38 17q21.31(chr17:43570878-44762377)x1 copy number loss See cases [RCV000053429] Chr17:43570878..44762377 [GRCh38]
Chr17:41648246..42839745 [GRCh37]
Chr17:39003772..40195271 [NCBI36]
Chr17:17q21.31		 pathogenic
GRCh38/hg38 17q21.31(chr17:43387123-43865083)x3 copy number gain See cases [RCV000137096] Chr17:43387123..43865083 [GRCh38]
Chr17:41464491..41942451 [GRCh37]
Chr17:38820017..39297977 [NCBI36]
Chr17:17q21.31		 uncertain significance
GRCh38/hg38 17q21.31(chr17:43080123-43897875)x3 copy number gain See cases [RCV000137690] Chr17:43080123..43897875 [GRCh38]
Chr17:41232140..41975243 [GRCh37]
Chr17:38485666..39330769 [NCBI36]
Chr17:17q21.31		 uncertain significance
GRCh38/hg38 17q21.31(chr17:43088882-43865172)x3 copy number gain See cases [RCV000139057] Chr17:43088882..43865172 [GRCh38]
Chr17:41240899..41942540 [GRCh37]
Chr17:38494425..39298066 [NCBI36]
Chr17:17q21.31		 uncertain significance
GRCh38/hg38 17q21.31(chr17:43322528-43849385)x3 copy number gain See cases [RCV000142192] Chr17:43322528..43849385 [GRCh38]
Chr17:41399892..41926753 [GRCh37]
Chr17:38755418..39282279 [NCBI36]
Chr17:17q21.31		 likely benign|uncertain significance
GRCh38/hg38 17q21.31(chr17:43050945-43897883)x3 copy number gain See cases [RCV000143635] Chr17:43050945..43897883 [GRCh38]
Chr17:41202962..41975251 [GRCh37]
Chr17:38456488..39330777 [NCBI36]
Chr17:17q21.31		 uncertain significance
GRCh38/hg38 17q23.1-25.1(chr17:36449220-75053130)x3 copy number gain See cases [RCV000137437] Chr17:36449220..75053130 [GRCh38]
Chr17:57595736..73049225 [GRCh37]
Chr17:54950518..70560820 [NCBI36]
Chr17:17q23.1-25.1		 pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:526-81041938) copy number gain See cases [RCV000511439] Chr17:526..81041938 [GRCh37]
Chr17:17p13.3-q25.3		 pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:526-81041938)x3 copy number gain See cases [RCV000512441] Chr17:526..81041938 [GRCh37]
Chr17:17p13.3-q25.3		 pathogenic
GRCh37/hg19 17q21.31(chr17:41540257-42044249)x1 copy number loss not provided [RCV000683936] Chr17:41540257..42044249 [GRCh37]
Chr17:17q21.31		 uncertain significance
GRCh37/hg19 17p13.3-q25.3(chr17:8547-81060040)x3 copy number gain not provided [RCV000739324] Chr17:8547..81060040 [GRCh37]
Chr17:17p13.3-q25.3		 pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:7214-81058310)x3 copy number gain not provided [RCV000739320] Chr17:7214..81058310 [GRCh37]
Chr17:17p13.3-q25.3		 pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:12344-81057996)x3 copy number gain not provided [RCV000739325] Chr17:12344..81057996 [GRCh37]
Chr17:17p13.3-q25.3		 pathogenic
GRCh37/hg19 17q21.31(chr17:41800157-41903109)x1 copy number loss not provided [RCV000848918] Chr17:41800157..41903109 [GRCh37]
Chr17:17q21.31		 uncertain significance
GRCh37/hg19 17q21.31(chr17:41399892-42125780)x3 copy number gain not provided [RCV001006903] Chr17:41399892..42125780 [GRCh37]
Chr17:17q21.31		 uncertain significance
GRCh37/hg19 17q21.31(chr17:41202796-41974964) copy number gain not specified [RCV002052596] Chr17:41202796..41974964 [GRCh37]
Chr17:17q21.31		 uncertain significance
GRCh38/hg38 17q21.31(chr17:43603558-44033313) copy number gain Anomalous pulmonary venous return [RCV003223581] Chr17:43603558..44033313 [GRCh38]
Chr17:17q21.31		 uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1931
Count of miRNA genes:800
Interacting mature miRNAs:906
Transcripts:ENST00000449302, ENST00000590148
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407041794GWAS690770_Hspine bone mineral density QTL GWAS690770 (human)6e-09spine bone mineral densitybone mineral density (CMO:0001226)174378125543781256Human
407041798GWAS690774_Hhip bone mineral density QTL GWAS690774 (human)5e-10hip bone mineral densitybone mineral density (CMO:0001226)174378125543781256Human
406902468GWAS551444_Hlip morphology measurement QTL GWAS551444 (human)0.000003lip morphology measurement174378228043782281Human
407097620GWAS746596_Hbone density QTL GWAS746596 (human)6e-13bone mineral mass (VT:0005007)bone mineral density (CMO:0001226)174378490943784910Human

Markers in Region
D17S1225  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371741,858,475 - 41,858,585UniSTSGRCh37
Build 361739,214,001 - 39,214,111RGDNCBI36
Celera1738,566,476 - 38,566,586RGD
Cytogenetic Map17q21.31UniSTS
HuRef1737,622,567 - 37,622,677UniSTS
GDB:314949  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map3p24.2UniSTS
Cytogenetic Map7q32UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map1q32.3UniSTS
Cytogenetic Map14q24.2UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map10p15.1UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map5q21UniSTS
Cytogenetic Map7p15-p14UniSTS
Cytogenetic Map20q11.2-q13.2UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic MapXp22UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map7q21-q22UniSTS
Cytogenetic Map19q13.13UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map14q13.2UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map18q12.1UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map5q31.3UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map6p25UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map1q41UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map3q13.13UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map6p12.3UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map1p36.3UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map12q14.2UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map8p21.2UniSTS
Cytogenetic Map17pUniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map8q24.3UniSTS
D8S2279  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map21q22.12UniSTS
Cytogenetic Map15q13UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map15q22.3UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map21q21.3UniSTS
Cytogenetic Map3p22-p21.3UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map2q24.2UniSTS
Cytogenetic Map17q24.2UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map3p14.1UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map7p14.1UniSTS
Cytogenetic Map2q22.3UniSTS
Cytogenetic Map15q13.2UniSTS
Cytogenetic Map12q24.1UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map5q31.2UniSTS
Cytogenetic Map2p25.2UniSTS
Cytogenetic Map3p24.3UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map5q14UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map1p36.32UniSTS
Cytogenetic Map1q42.12UniSTS
Cytogenetic Map7q21.11UniSTS
Cytogenetic Map9q34.2UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map8q22.3UniSTS
Cytogenetic Map6p21.1-p12UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map7p21.3UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map22q11.22UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map1q12UniSTS
Cytogenetic Map8p23UniSTS
Cytogenetic Map11q13.2-q13.3UniSTS
Cytogenetic Map13q14.1-q14.3UniSTS
Cytogenetic Map3q22-q24UniSTS
Cytogenetic Map3q13.1-q13.2UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic Map5q23.3-q31.1UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map14q32.3UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map7q32UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map17q11UniSTS
Cytogenetic Map17p13.1-p12UniSTS
Cytogenetic Map18q21.33UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map5q14.1UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map1q21-q23UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map4q21.1UniSTS
Cytogenetic Map12q13.13UniSTS
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Cytogenetic Map8p12-p11UniSTS
Cytogenetic Map18p11.2UniSTS
Cytogenetic Map7p11.1UniSTS
Cytogenetic Map1q31-q32UniSTS
Cytogenetic Map2q12UniSTS
Cytogenetic Map3p21.32UniSTS
Cytogenetic Map2p24.2UniSTS
Cytogenetic Map2q33-q34UniSTS
Cytogenetic Map6q24.1UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map15q13.3UniSTS
Cytogenetic Map10q26.11UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map10q23.33UniSTS
Cytogenetic Map12p12.1UniSTS
Cytogenetic Map7p13-p12UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map17q11-q21UniSTS
Cytogenetic Map12q23UniSTS
Cytogenetic Map6p24-p22.3UniSTS
Cytogenetic Map14q23.2UniSTS
Cytogenetic Map7q31.1-q31.2UniSTS
Cytogenetic Map8q22.2UniSTS
Cytogenetic Map15q21.2UniSTS
Cytogenetic Map3p26.1-p25.1UniSTS
Cytogenetic Map5q35UniSTS
Cytogenetic Map3q13.2UniSTS
Cytogenetic Map4p15.2UniSTS
Cytogenetic Map6q16.3UniSTS
Cytogenetic Map17q24-q25UniSTS
Cytogenetic MapXq12UniSTS
Cytogenetic MapXq27.1UniSTS
Cytogenetic Map8q12.3UniSTS
Cytogenetic Map5q21.2UniSTS
Cytogenetic Map5q15UniSTS
Cytogenetic Map5q35.1UniSTS
Cytogenetic Map4q13.3UniSTS
Cytogenetic Map4q35.2UniSTS
Cytogenetic Map3p26.1UniSTS
Cytogenetic Map3p11.1UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map2q21.2UniSTS
Cytogenetic Map19p13.13UniSTS
Cytogenetic Map18q12.3UniSTS
Cytogenetic Map18p11.3UniSTS
Cytogenetic Map17q11.1UniSTS
Cytogenetic Map15q25.1UniSTS
Cytogenetic Map13q12.3UniSTS
Cytogenetic Map12q23.2UniSTS
Cytogenetic Map12q12-q13UniSTS
Cytogenetic Map12q14UniSTS
Cytogenetic Map5q33.1UniSTS
Cytogenetic Map2q32-q34UniSTS
Cytogenetic Map16q22.3UniSTS
Cytogenetic Map2p15-p13UniSTS
Cytogenetic MapXp11.4UniSTS
Cytogenetic Map19q13.33-q13.41UniSTS
Cytogenetic Map20p11UniSTS
Cytogenetic Map6q23-q24UniSTS
Cytogenetic Map2p12UniSTS
Cytogenetic Map2p13UniSTS
Cytogenetic Map13q11-q12UniSTS
Cytogenetic Map6p12.3-p11.2UniSTS
Cytogenetic Map6q16.1-q16.3UniSTS
Cytogenetic Map22q11UniSTS
Cytogenetic Map7q31.2UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map3q25.2UniSTS
Cytogenetic Map3p21.1-p14.3UniSTS
Cytogenetic Map6p12.1UniSTS
Cytogenetic Map3q23-q24UniSTS
Cytogenetic Map3q12UniSTS
Cytogenetic Map7q11.1UniSTS
Cytogenetic Map3q22.3UniSTS
Cytogenetic Map7q21.3UniSTS
Cytogenetic Map4q31.1UniSTS
Cytogenetic Map22q12-q13UniSTS
Cytogenetic Map4q23UniSTS
Cytogenetic MapXp22.12UniSTS
Cytogenetic Map6q16.1UniSTS
Cytogenetic Map13q14.13UniSTS
Cytogenetic Map18q21.3UniSTS
Cytogenetic Map9q33.2UniSTS
Cytogenetic Map11q21UniSTS
Cytogenetic Map8q12UniSTS
Cytogenetic Map4q28-q32UniSTS
Cytogenetic Map17q24.3UniSTS
Cytogenetic Map6p23UniSTS
Cytogenetic Map8p11UniSTS
Cytogenetic Map5q34UniSTS
Cytogenetic Map1q24.3UniSTS
Cytogenetic Map9q33.1UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map2p16.2UniSTS
Cytogenetic Map9q22.31UniSTS
Cytogenetic Map9p24.3UniSTS
Cytogenetic Map7q35UniSTS
Cytogenetic Map1p36.2UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map16p12UniSTS
Cytogenetic Map1q22-q23UniSTS
Cytogenetic Map13q22.1UniSTS
Cytogenetic Map2q12.2UniSTS
Cytogenetic Map8p12UniSTS
Cytogenetic Map4q21UniSTS
Cytogenetic Map13q12.2UniSTS
Cytogenetic Map9q31-q33UniSTS
Cytogenetic Map6p24.1UniSTS
Cytogenetic Map1q23UniSTS
Cytogenetic Map11q12-q13UniSTS
Cytogenetic Map11q13.3UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic Map11q12.1UniSTS
Cytogenetic Map3p26UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map8p21UniSTS
Cytogenetic Map19q13.1-q13.2UniSTS
Cytogenetic Map1p33-p32UniSTS
Cytogenetic Map7q36.2UniSTS
Cytogenetic Map4q32.3UniSTS
Cytogenetic Map16p13.2UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map10q26.1UniSTS
Cytogenetic Map9q32-q33.3UniSTS
Cytogenetic Map9q22.1-q22.2UniSTS
Cytogenetic Map3q26.1-q26.2UniSTS
Cytogenetic Map5q31-q34UniSTS
Cytogenetic Map9q33-q34UniSTS
Cytogenetic Map5q11.2-q13.2UniSTS
Cytogenetic Map13q32UniSTS
Cytogenetic Map9q22.32UniSTS
Cytogenetic Map1p36.3UniSTS
Cytogenetic Map1p36.3-p36.2UniSTS
Cytogenetic Map4q28.1UniSTS
Cytogenetic Map5q22UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic MapXq13.3UniSTS
Cytogenetic Map9q31.3UniSTS
Cytogenetic Map3p26.3UniSTS
Cytogenetic Map2q11.1UniSTS
Cytogenetic Map21q11.2UniSTS
Cytogenetic Map18q21.32UniSTS
Cytogenetic Map15q26.2UniSTS
Cytogenetic Map12q24.23UniSTS
Cytogenetic Map10q25.3UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map20p12.1UniSTS
Cytogenetic Map2q31.1-q31.2UniSTS
Cytogenetic MapXp22.31UniSTS
Cytogenetic MapXp21.3UniSTS
Cytogenetic Map5q33.3UniSTS
Cytogenetic Map4q28.2UniSTS
Cytogenetic Map3p14.2UniSTS
Cytogenetic Map3q24UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map20q13.2UniSTS
Cytogenetic Map14q11.2-q12UniSTS
Cytogenetic Map3p24UniSTS
Cytogenetic Map12q23.3UniSTS
Cytogenetic Map11q24.3UniSTS
Cytogenetic Map11q14.3UniSTS
Cytogenetic Map10q25.2UniSTS
Cytogenetic Map3q25.1UniSTS
Cytogenetic Map8q13UniSTS
Cytogenetic Map1p22.2UniSTS
Cytogenetic Map3p22.3UniSTS
Cytogenetic Map18q11.1UniSTS
Cytogenetic Map8q23.3UniSTS
Cytogenetic Map15q24UniSTS
Cytogenetic Map11cen-q12UniSTS
Cytogenetic Map11q25UniSTS
Cytogenetic Map3p22.2UniSTS
Cytogenetic MapXp21.1UniSTS
Cytogenetic Map7q36UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map12q21UniSTS
Cytogenetic Map7p15UniSTS
Cytogenetic Map7q22-q31UniSTS
Cytogenetic Map11q22UniSTS
Cytogenetic Map5p15.3UniSTS
Cytogenetic Map20q13.3-qterUniSTS
Cytogenetic Map1p35-p34UniSTS
Cytogenetic Map4p13-p12UniSTS
Cytogenetic Map10q21-q22UniSTS
Cytogenetic Map4q22UniSTS
Cytogenetic Map7p13-p11.1UniSTS
Cytogenetic Map9q31-q34UniSTS
Cytogenetic Map7q21.1-q22UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map3q13.13-q13.2UniSTS
Cytogenetic MapXp22.13UniSTS
Cytogenetic Map13q12.12UniSTS
Cytogenetic Map13q14.2UniSTS
Cytogenetic Map12qUniSTS
Cytogenetic Map1pUniSTS
Cytogenetic Map16pUniSTS
Cytogenetic Map15qUniSTS
Cytogenetic Map7qUniSTS
Cytogenetic Map2qUniSTS
Cytogenetic Map5q13.1UniSTS
Cytogenetic Map11p14.1UniSTS
Cytogenetic Map4q32UniSTS
Cytogenetic Map2p22UniSTS
Cytogenetic Map5q14.3UniSTS
Cytogenetic Map10p12.1UniSTS
Cytogenetic Map5q23.2UniSTS
Cytogenetic Map2p24.1UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map12p13.32UniSTS
Cytogenetic Map9p21.1UniSTS
Cytogenetic Map9q34.2-q34.3UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 346
Low 17 3 14 3 85 3 61 15 103 13 49 55 1 7 1
Below cutoff 1658 2240 1335 386 1080 268 3653 1631 3324 261 773 1290 131 976 2352 3

Sequence


Ensembl Acc Id: ENST00000449302   ⟹   ENSP00000415662
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1743,780,435 - 43,787,620 (+)Ensembl
Ensembl Acc Id: ENST00000590148   ⟹   ENSP00000468141
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1743,783,186 - 43,784,833 (+)Ensembl
RefSeq Acc Id: NM_001136483   ⟹   NP_001129955
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381743,780,435 - 43,787,620 (+)NCBI
GRCh371741,857,803 - 41,862,054 (+)RGD
Celera1738,565,804 - 38,570,055 (+)RGD
HuRef1737,621,895 - 37,626,146 (+)ENTREZGENE
CHM1_11742,093,413 - 42,097,664 (+)NCBI
T2T-CHM13v2.01744,632,979 - 44,640,164 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001353400   ⟹   NP_001340329
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381743,780,435 - 43,787,620 (+)NCBI
T2T-CHM13v2.01744,632,979 - 44,640,164 (+)NCBI
Sequence:
RefSeq Acc Id: NP_001129955   ⟸   NM_001136483
- Peptide Label: isoform 1
- UniProtKB: B2RV13 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001340329   ⟸   NM_001353400
- Peptide Label: isoform 2
- Sequence:
Ensembl Acc Id: ENSP00000468141   ⟸   ENST00000590148
Ensembl Acc Id: ENSP00000415662   ⟸   ENST00000449302

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-B2RV13-F1-model_v2 AlphaFold B2RV13 1-164 view protein structure

Promoters
RGD ID:7235199
Promoter ID:EPDNEW_H23345
Type:initiation region
Name:C17orf105_1
Description:chromosome 17 open reading frame 105
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381743,780,435 - 43,780,495EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:37241 AgrOrtholog
COSMIC CFAP97D1 COSMIC
Ensembl Genes ENSG00000231256 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000449302 ENTREZGENE
  ENST00000449302.8 UniProtKB/Swiss-Prot
  ENST00000590148.1 UniProtKB/TrEMBL
GTEx ENSG00000231256 GTEx
HGNC ID HGNC:37241 ENTREZGENE
Human Proteome Map CFAP97D1 Human Proteome Map
InterPro CFAP97D1/2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Hmw/CFAP97D1 UniProtKB/Swiss-Prot
KEGG Report hsa:284067 UniProtKB/Swiss-Prot
NCBI Gene 284067 ENTREZGENE
OMIM 619866 OMIM
PANTHER PTHR33768 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SPERM AXONEMAL MAINTENANCE PROTEIN CFAP97D1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam KIAA1430 UniProtKB/Swiss-Prot
PharmGKB PA165431514 PharmGKB
UniProt B2RV13 ENTREZGENE, UniProtKB/Swiss-Prot
  K7ER76_HUMAN UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-12-19 CFAP97D1  CFAP97 domain containing 1  C17orf105  chromosome 17 open reading frame 105  Symbol and/or name change 5135510 APPROVED