Ptprj (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 3 | 96,861,785 - 97,017,702 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 76,405,917 - 76,561,842 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 76,405,927 - 76,562,260 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 3 | 79,890,269 - 80,046,200 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 88,488,786 - 88,644,719 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 86,341,245 - 86,497,188 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 79,233,519 - 79,390,956 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 79,233,525 - 79,390,956 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 85,947,682 - 86,099,287 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 74,796,764 - 74,935,540 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 3 | 74,693,135 - 74,831,912 (-) | NCBI | | | | | Celera | 3 | 75,621,921 - 75,777,388 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | q24 | NCBI | | | | |
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PTPRJ (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 11 | 47,980,559 - 48,170,839 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 11 | 47,980,425 - 48,170,839 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 11 | 48,002,111 - 48,192,391 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 11 | 47,958,686 - 48,148,970 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 11 | 47,958,688 - 48,146,246 | NCBI | | | | | Celera | 11 | 48,154,504 - 48,344,533 (+) | NCBI | | Celera | | | Cytogenetic Map | 11 | p11.2 | NCBI | | | | | HuRef | 11 | 47,683,384 - 47,903,543 (+) | NCBI | | HuRef | | | CHM1_1 | 11 | 48,001,881 - 48,191,974 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 11 | 48,150,119 - 48,340,376 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Ptprj (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 2 | 90,260,100 - 90,411,102 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 90,260,098 - 90,410,991 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 90,429,756 - 90,580,694 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 90,429,754 - 90,580,647 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 90,269,913 - 90,420,804 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 90,233,731 - 90,381,407 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 91,810,313 - 91,967,158 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | E1 | NCBI | | | | | cM Map | 2 | 50.19 | NCBI | | | | |
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Ptprj (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955422 | 399,357 - 443,054 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955422 | 396,266 - 438,792 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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PTPRJ (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 9 | 50,196,084 - 50,386,550 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 11 | 50,215,619 - 50,406,485 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 11 | 47,941,134 - 48,130,538 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 11 | 48,518,844 - 48,672,844 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 11 | 48,613,761 - 48,670,494 (+) | Ensembl | panpan1.1 | | panPan2 | |
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PTPRJ (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 18 | 41,586,262 - 41,635,386 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 18 | 41,586,112 - 41,635,308 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 18 | 40,315,308 - 40,366,352 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 18 | 42,238,579 - 42,289,675 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 18 | 42,238,586 - 42,285,426 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 18 | 41,727,516 - 41,778,615 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 18 | 41,280,105 - 41,331,461 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 18 | 42,009,997 - 42,061,288 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Ptprj (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404947 | 19,050,113 - 19,123,158 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936562 | 1,165,304 - 1,211,817 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936562 | 1,161,764 - 1,234,800 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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PTPRJ (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 2 | 14,548,428 - 14,724,474 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 2 | 14,548,489 - 14,724,823 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 2 | 15,632,255 - 16,007,397 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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PTPRJ (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 1 | 17,137,896 - 17,328,836 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 1 | 17,135,907 - 17,328,590 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666038 | 114,433,977 - 114,653,560 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Ptprj (Heterocephalus glaber - naked mole-rat) |
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