OPN4 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 8 | 98,650,558 - 98,659,765 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 10 | 98,655,877 - 98,665,084 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 10 | 83,082,351 - 83,095,161 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 Ensembl | 10 | 86,641,746 - 86,653,143 (+) | Ensembl | panpan1.1 | | panPan2 | |
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OPN4 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 10 | 86,654,547 - 86,666,460 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 10 | 86,654,518 - 86,666,460 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 10 | 88,414,304 - 88,426,217 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 10 | 88,404,294 - 88,416,197 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 10 | 88,404,377 - 88,416,192 | NCBI | | | | | Celera | 10 | 82,417,087 - 82,428,990 (+) | NCBI | | Celera | | | Cytogenetic Map | 10 | q23.2 | NCBI | | | | | HuRef | 10 | 82,268,556 - 82,280,460 (+) | NCBI | | HuRef | | | CHM1_1 | 10 | 88,695,970 - 88,707,871 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 10 | 87,538,707 - 87,550,619 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Opn4 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 14 | 34,312,575 - 34,322,099 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 14 | 34,312,575 - 34,322,099 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 14 | 34,590,618 - 34,600,142 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 14 | 34,590,618 - 34,600,142 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 14 | 35,403,804 - 35,413,328 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 14 | 33,421,454 - 33,429,234 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 14 | 30,856,294 - 30,865,818 (-) | NCBI | | Celera | | | Cytogenetic Map | 14 | B | NCBI | | | | | cM Map | 14 | 20.83 | NCBI | | | | |
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Opn4 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 16 | 9,926,638 - 9,935,810 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 16 | 9,920,408 - 9,929,580 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 16 | 9,920,491 - 10,005,711 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 16 | 9,940,099 - 9,949,239 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 16 | 11,084,803 - 11,093,943 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 16 | 9,935,147 - 9,944,287 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 16 | 10,943,353 - 10,966,602 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 16 | 10,943,341 - 10,952,549 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 16 | 9,268,356 - 9,277,528 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 16 | 10,249,756 - 10,258,923 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 16 | 10,249,757 - 10,258,921 (-) | NCBI | | | | | Celera | 16 | 5,287,559 - 5,296,704 (+) | NCBI | | Celera | | | Cytogenetic Map | 16 | p15 | NCBI | | | | |
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Opn4 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955510 | 5,724,120 - 5,736,135 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955510 | 5,723,804 - 5,736,070 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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OPN4 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 4 | 34,350,058 - 34,365,410 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 4 | 34,355,128 - 34,365,215 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 4 | 34,341,511 - 34,356,871 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 4 | 34,709,962 - 34,725,323 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 4 | 34,715,036 - 34,725,123 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 4 | 34,555,991 - 34,571,338 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 4 | 34,725,234 - 34,740,584 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 4 | 35,230,251 - 35,245,607 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Opn4 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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OPN4 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 14 | 87,647,238 - 87,658,815 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 14 | 87,645,563 - 87,660,820 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 14 | 94,902,249 - 94,913,351 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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OPN4 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 9 | 45,199,897 - 45,212,193 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 9 | 45,200,707 - 45,211,636 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666048 | 5,312,090 - 5,321,780 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Opn4 (Heterocephalus glaber - naked mole-rat) |
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