Nr4a2 (nuclear receptor subfamily 4, group A, member 2)

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Gene: Nr4a2 (nuclear receptor subfamily 4, group A, member 2) Rattus norvegicus

Analyze

Symbol:

Nr4a2

Name:

nuclear receptor subfamily 4, group A, member 2

RGD ID:

3202

Description:

Enables DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in several processes, including negative regulation of neuron apoptotic process; positive regulation of transcription by RNA polymerase II; and retina development in camera-type eye. Acts upstream of or within response to inorganic substance and response to insecticide. Part of chromatin. Biomarker of Parkinsonism and epilepsy. Human ortholog(s) of this gene implicated in Parkinson's disease. Orthologous to human NR4A2 (nuclear receptor subfamily 4 group A member 2); PARTICIPATES IN Parkinson's disease pathway; INTERACTS WITH 1,2,4-trimethylbenzene; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

nuclear orphan receptor HZF-3; nuclear receptor subfamily 4 group A member 2; nuclear receptor subfamily 4 group A member 2 variant NURR1a; nuclear receptor subfamily 4 group A member 2 variant NURR1b; nuclear receptor subfamily 4 group A member 2 variant NURR1c; nuclear receptor subfamily 4 group A member 2 variant NURR2c; nuclear receptor subfamily 4 group A member 2 variant TINUR; nur related protein 1; NUR-related factor 1; Nurr1; orphan nuclear receptor NURR1; orphan receptor; regenerating liver nuclear receptor 1; RNR-1; RNR1; SL-322

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	3	41,689,847 - 41,707,036 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	41,689,851 - 41,697,877 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	45,028,318 - 45,033,797 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	53,613,078 - 53,618,558 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	51,404,666 - 51,410,139 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	43,111,258 - 43,128,391 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	43,111,240 - 43,119,159 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	48,183,106 - 48,192,467 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	38,866,205 - 38,871,678 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	38,763,218 - 38,769,911 (-)	NCBI
Celera	3	39,783,304 - 39,788,777 (-)	NCBI		Celera
Cytogenetic Map	3	q21	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Animal Toxoplasmosis (ISO)

Arsenic Poisoning (ISO)

autism spectrum disorder (ISO)

autistic disorder (ISO)

Colorectal Neoplasms (ISO)

Developmental Disabilities (ISO)

Developmental Disease (ISO)

epilepsy (IEP,ISO)

Episodic Ataxia Type 9 (ISO)

genetic disease (ISO)

INTELLECTUAL DEVELOPMENTAL DISORDER WITH LANGUAGE IMPAIRMENT AND EARLY-ONSET DOPA-RESPONSIVE DYSTONIA-PARKINSONISM (ISO)

juvenile rheumatoid arthritis (ISO)

late onset Parkinson's disease (ISO)

Neurodevelopmental Disorders (ISO)

Parkinson's disease (ISO,ISS)

Parkinsonism (IEP)

psoriatic arthritis (ISO)

schizophrenia (ISS)

skin disease (ISO)

Vitamin D Deficiency (IEP)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-demecolcine (ISO)

(-)-epigallocatechin 3-gallate (ISO)

1,2,4-trimethylbenzene (EXP)

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine (ISO)

17beta-estradiol (EXP,ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-hydroxypropanoic acid (ISO)

3,4-methylenedioxymethamphetamine (ISO)

3,7-dihydropurine-6-thione (EXP)

4,4'-diaminodiphenylmethane (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

8-Br-cAMP (ISO)

acetaldehyde (ISO)

acrylamide (EXP,ISO)

afimoxifene (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

amiodarone (ISO)

ammonium chloride (EXP)

amodiaquine (ISO)

antimycin A (ISO)

arachidonic acid (ISO)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenous acid (ISO)

atrazine (EXP)

benzalkonium chloride (ISO)

benzene (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

bifenthrin (EXP)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

buta-1,3-diene (ISO)

butanal (ISO)

C.I. Natural Red 20 (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

Calcimycin (ISO)

capecitabine (ISO)

carbon nanotube (ISO)

carmustine (EXP)

Carnosol (ISO)

CGP 52608 (ISO)

chloroquine (ISO)

chlorpyrifos (ISO)

choline (ISO)

clozapine (ISO)

cobalt dichloride (ISO)

cocaine (ISO)

colforsin daropate hydrochloride (ISO)

copper(II) sulfate (ISO)

corn oil (EXP)

coumestrol (ISO)

crocidolite asbestos (ISO)

Cuprizon (EXP)

curcumin (ISO)

cyclosporin A (ISO)

dabigatran (EXP)

DDE (ISO)

decabromodiphenyl ether (EXP)

deguelin (ISO)

dexamethasone (ISO)

diarsenic trioxide (ISO)

dibutyl phthalate (ISO)

dieldrin (ISO)

diheptyl phthalate (EXP)

dipentyl phthalate (EXP)

disodium selenite (ISO)

dorsomorphin (ISO)

doxorubicin (EXP,ISO)

Enterolactone (ISO)

epoxiconazole (ISO)

fenvalerate (EXP)

flavonoids (EXP)

fluoranthene (ISO)

fluoxetine (ISO)

flutamide (EXP)

folic acid (ISO)

formaldehyde (ISO)

gamma-hexachlorocyclohexane (EXP)

geraniol (ISO)

glafenine (ISO)

glutathione (EXP)

glycidol (EXP)

GW 1929 (EXP)

heroin (EXP)

hydroquinone (ISO)

indometacin (ISO)

kainic acid (EXP,ISO)

ketamine (EXP)

L-gamma-glutamyl-L-cysteine (ISO)

L-methionine (ISO)

leptomycin B (ISO)

lipopolysaccharide (ISO)

lithium atom (ISO)

lithium chloride (EXP)

lithium hydride (ISO)

lucanthone (ISO)

maneb (EXP)

medroxyprogesterone acetate (ISO)

mercaptopurine (EXP)

metformin (EXP)

methamphetamine (EXP,ISO)

methimazole (EXP)

methotrexate (ISO)

methylisothiazolinone (ISO)

methylmercury chloride (ISO)

mitoxantrone (ISO)

mono(2-ethylhexyl) phthalate (ISO)

monosodium L-glutamate (ISO)

morphine (EXP,ISO)

N(6)-butyryl-cAMP (EXP)

N-[2-(4-bromocinnamylamino)ethyl]isoquinoline-5-sulfonamide (ISO)

N-methyl-4-phenylpyridinium (ISO)

naphthalenes (EXP)

nickel atom (ISO)

nickel sulfate (ISO)

nitrofen (EXP)

paracetamol (EXP)

paraquat (EXP,ISO)

paricalcitol (ISO)

PCB138 (ISO)

pentetrazol (ISO)

perfluorooctane-1-sulfonic acid (ISO)

perfluorooctanoic acid (ISO)

permethrin (EXP,ISO)

phencyclidine (ISO)

phenformin (EXP)

phorbol 13-acetate 12-myristate (ISO)

phosphorus atom (ISO)

phosphorus(.) (ISO)

picoxystrobin (ISO)

pirimiphos-methyl (ISO)

pirinixic acid (ISO)

potassium chloride (EXP)

potassium chromate (ISO)

pregnenolone 16alpha-carbonitrile (EXP)

proanthocyanidin (ISO)

probenecid (ISO)

propanal (ISO)

prostaglandin E2 (ISO)

purine-6-thiol (EXP)

rac-lactic acid (ISO)

reactive oxygen species (ISO)

rotenone (EXP,ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

SB 431542 (ISO)

SCH 23390 (EXP)

serpentine asbestos (ISO)

Shikonin (ISO)

silicon dioxide (ISO)

silver atom (ISO)

silver(0) (ISO)

simazine (EXP,ISO)

sodium arsenite (ISO)

sodium dichromate (ISO)

sodium dodecyl sulfate (ISO)

sodium fluoride (ISO)

Soman (EXP)

styrene (ISO)

sulfadimethoxine (EXP)

tamoxifen (ISO)

temozolomide (ISO)

tetradecane (EXP)

thalidomide (ISO)

thapsigargin (ISO)

thifluzamide (ISO)

thimerosal (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

topiramate (EXP)

torcetrapib (ISO)

triacsin C (ISO)

trichostatin A (ISO)

triphenylstannane (EXP)

triptonide (ISO)

troglitazone (ISO)

trovafloxacin (ISO)

undecane (EXP)

urethane (ISO)

valproic acid (EXP,ISO)

vinclozolin (EXP)

vitamin D (EXP)

zinc atom (ISO)

zinc(0) (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

adult locomotory behavior (IEA,ISO)

cellular response to corticotropin-releasing hormone stimulus (IBA,IEA,ISO,ISS)

cellular response to extracellular stimulus (IEA,ISO)

cellular response to oxidative stress (IEA,ISO)

central nervous system neuron differentiation (IBA,ISO)

central nervous system projection neuron axonogenesis (IEA,ISO)

cerebral cortex development (IEP)

DNA-templated transcription (IEA,ISO,ISS)

dopamine biosynthetic process (IEA,ISO)

dopamine metabolic process (ISO)

dopaminergic neuron differentiation (IBA,IEA,ISO,ISS)

fat cell differentiation (IEA,ISO,ISS)

gene expression (ISO)

general adaptation syndrome (IEA,ISO)

habenula development (IEA,ISO)

intracellular receptor signaling pathway (IEA)

learning or memory (IMP)

negative regulation of apoptotic signaling pathway (IEA,ISO)

negative regulation of neuron apoptotic process (IEA,IMP,ISO)

negative regulation of transcription by RNA polymerase II (IEA,ISO)

nervous system development (ISO)

neuron apoptotic process (IEA,ISO)

neuron differentiation (ISO)

neuron maturation (IEA,ISO)

neuron migration (IEA,ISO)

positive regulation of DNA-templated transcription (ISO)

positive regulation of transcription by RNA polymerase II (IDA,IEA,ISO)

post-embryonic development (IEA,ISO)

regulation of DNA-templated transcription (ISO)

regulation of dopamine metabolic process (IEA,ISO)

regulation of gene expression (ISO)

regulation of respiratory gaseous exchange (IEA,ISO)

regulation of transcription by RNA polymerase II (IBA)

response to amphetamine (IEA,ISO)

response to hypoxia (IEA,ISO)

response to inorganic substance (IDA)

response to insecticide (IDA)

retina development in camera-type eye (IEP)

transcription by RNA polymerase II (IEA,ISO)

Cellular Component

chromatin (IDA)

cytoplasm (IEA)

nuclear speck (IEA,ISO)

nucleus (IBA,IEA,ISO)

transcription regulator complex (IBA)

Molecular Function

DNA binding (ISO)

DNA-binding transcription activator activity, RNA polymerase II-specific (IDA,IEA,ISO)

DNA-binding transcription factor activity, RNA polymerase II-specific (IBA)

nuclear glucocorticoid receptor binding (IBA,IEA,ISO)

nuclear receptor activity (IEA)

protein binding (ISO)

protein heterodimerization activity (IEA,ISO,ISS)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IBA,IDA,IEA,ISO)

RNA polymerase II transcription regulatory region sequence-specific DNA binding (ISO)

sequence-specific DNA binding (IDA,IEA,ISO)

sequence-specific double-stranded DNA binding (ISO)

zinc ion binding (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

Parkinson's disease pathway (ISS)

References

References - curated

#	Reference Title	Reference Citation
1.	Nurr1 protein is required for N-methyl-D-aspartic acid (NMDA) receptor-mediated neuronal survival.	Barneda-Zahonero B, etal., J Biol Chem. 2012 Mar 30;287(14):11351-62. doi: 10.1074/jbc.M111.272427. Epub 2012 Jan 31.
2.	Knockdown of Nurr1 in the rat hippocampus: implications to spatial discrimination learning and memory.	Colón-Cesario WI, etal., Learn Mem. 2006 Nov-Dec;13(6):734-44. doi: 10.1101/lm.407706.
3.	Chronic Toxoplasma gondii in Nurr1-null heterozygous mice exacerbates elevated open field activity.	Eells JB, etal., PLoS One. 2015 Apr 9;10(4):e0119280. doi: 10.1371/journal.pone.0119280. eCollection 2015.
4.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
5.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
6.	Valproate increases dopamine transporter expression through histone acetylation and enhanced promoter binding of Nurr1.	Green AL, etal., Neuropharmacology. 2017 Oct;125:189-196. doi: 10.1016/j.neuropharm.2017.07.020. Epub 2017 Jul 22.
7.	Hypoxia-inducible factor 1 alpha and nuclear-related receptor 1 as targets for neuroprotection by albendazole in a rat rotenone model of Parkinson's disease.	Kandil EA, etal., Clin Exp Pharmacol Physiol. 2019 Dec;46(12):1141-1150. doi: 10.1111/1440-1681.13162. Epub 2019 Sep 9.
8.	Identification of a new brain-specific transcription factor, NURR1.	Law SW, etal., Mol Endocrinol. 1992 Dec;6(12):2129-35.
9.	Expression patterns of Nurr1 in rat retina development.	Li Y, etal., J Mol Histol. 2012 Dec;43(6):633-9. doi: 10.1007/s10735-012-9433-z. Epub 2012 Jun 20.
10.	Expression of Nurr1 during rat brain and spinal cord development.	Li Y, etal., Neurosci Lett. 2011 Jan 13;488(1):49-54. doi: 10.1016/j.neulet.2010.10.078. Epub 2010 Nov 5.
11.	Developmental Vitamin D (DVD) Deficiency Reduces Nurr1 and TH Expression in Post-mitotic Dopamine Neurons in Rat Mesencephalon.	Luan W, etal., Mol Neurobiol. 2018 Mar;55(3):2443-2453. doi: 10.1007/s12035-017-0497-3. Epub 2017 Apr 1.
12.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
13.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
14.	Rapid increase of Nurr1 expression in the substantia nigra after 6-hydroxydopamine lesion in the striatum of the rat.	Ojeda V, etal., J Neurosci Res 2003 Sep 1;73(5):686-97.
15.	HZF-3, an immediate-early orphan receptor homologous to NURR1/NOT: induction upon membrane depolarization and seizures.	Pena de Ortiz S and Jamieson GA Jr, Brain Res Mol Brain Res. 1996 May;38(1):1-13.
16.	Expression of nuclear hormone receptors within the rat hippocampus: identification of novel orphan receptors.	Pena de Ortiz S, etal., Brain Res Mol Brain Res 1994 May;23(3):278-83.
17.	PGE1 and PGA1 bind to Nurr1 and activate its transcriptional function.	Rajan S, etal., Nat Chem Biol. 2020 Aug;16(8):876-886. doi: 10.1038/s41589-020-0553-6. Epub 2020 May 25.
18.	GOA pipeline	RGD automated data pipeline
19.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
20.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
21.	Requirements for heterodimerization between the orphan nuclear receptor Nurr1 and retinoid X receptors.	Sacchetti P, etal., J Biol Chem 2002 Sep 20;277(38):35088-96.
22.	RNR-1, a nuclear receptor in the NGFI-B/Nur77 family that is rapidly induced in regenerating liver.	Scearce LM, etal., J Biol Chem 1993 Apr 25;268(12):8855-61.
23.	Tentative Sequence Identification Numbers	Tentative Sequence Data IDs. TIGR Gene Index, Rat Data
24.	Rat nurr1 is prominently expressed in perirhinal cortex, and differentially induced in the hippocampal dentate gyrus by electroconvulsive vs. kindled seizures.	Xing G, etal., Brain Res Mol Brain Res 1997 Jul;47(1-2):251-61.
25.	Association of homozygous 7048G7049 variant in the intron six of Nurr1 gene with Parkinson's disease.	Xu PY, etal., Neurology 2002 Mar 26;58(6):881-4.

Additional References at PubMed

PMID:7877627	PMID:8889548	PMID:8961274	PMID:9092472	PMID:9520484	PMID:9608532	PMID:10465447	PMID:10523643	PMID:10585298	PMID:11113533	PMID:11517332	PMID:11749040
PMID:12385813	PMID:12787064	PMID:12849735	PMID:12915123	PMID:14528447	PMID:14622207	PMID:14671317	PMID:14742729	PMID:15009684	PMID:15155786	PMID:15485875	PMID:15591535
PMID:15716272	PMID:16313515	PMID:16723737	PMID:16782508	PMID:17034791	PMID:17077287	PMID:17184956	PMID:17394463	PMID:17506860	PMID:18388149	PMID:18463503	PMID:18772553
PMID:18815614	PMID:18945812	PMID:18951485	PMID:19133164	PMID:19144721	PMID:19150624	PMID:19321449	PMID:19362551	PMID:19429166	PMID:19515692	PMID:19906978	PMID:20533997
PMID:20566846	PMID:21663595	PMID:22525717	PMID:22627286	PMID:23566817	PMID:23624190	PMID:24399192	PMID:24584059	PMID:24940803	PMID:25815475	PMID:26497037	PMID:26873851
PMID:27219004	PMID:27435855	PMID:27553040	PMID:27687740	PMID:27826104	PMID:29145474	PMID:29152652	PMID:29450981	PMID:29565514	PMID:30634592	PMID:30949504	PMID:31000586
PMID:31087449	PMID:31175960	PMID:31287373	PMID:31317490	PMID:32238479	PMID:33864663	PMID:34774582	PMID:35365988	PMID:37621064

Genomics

Comparative Map Data

Nr4a2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	3	41,689,847 - 41,707,036 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	41,689,851 - 41,697,877 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	45,028,318 - 45,033,797 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	53,613,078 - 53,618,558 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	51,404,666 - 51,410,139 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	43,111,258 - 43,128,391 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	43,111,240 - 43,119,159 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	48,183,106 - 48,192,467 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	38,866,205 - 38,871,678 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	38,763,218 - 38,769,911 (-)	NCBI
Celera	3	39,783,304 - 39,788,777 (-)	NCBI		Celera
Cytogenetic Map	3	q21	NCBI

NR4A2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	156,324,437 - 156,332,721 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	156,324,437 - 156,342,348 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	157,180,949 - 157,189,233 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	156,889,195 - 156,897,446 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	2	157,006,458 - 157,014,708	NCBI
Celera	2	150,794,299 - 150,802,639 (-)	NCBI		Celera
Cytogenetic Map	2	q24.1	NCBI
HuRef	2	149,066,205 - 149,074,545 (-)	NCBI		HuRef
CHM1_1	2	157,187,025 - 157,195,368 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	2	156,777,128 - 156,785,409 (-)	NCBI		T2T-CHM13v2.0

Nr4a2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	56,996,845 - 57,014,018 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	56,996,842 - 57,014,015 (-)	Ensembl		GRCm39 Ensembl
GRCm38	2	57,106,830 - 57,124,003 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	57,106,830 - 57,124,003 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	56,959,637 - 56,976,414 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	56,923,542 - 56,930,641 (-)	NCBI		MGSCv36	mm8
Celera	2	58,866,926 - 58,883,671 (-)	NCBI		Celera
Cytogenetic Map	2	C1.1	NCBI
cM Map	2	31.66	NCBI

Nr4a2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955449	16,937,794 - 16,945,731 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955449	16,928,780 - 16,944,536 (+)	NCBI	ChiLan1.0	ChiLan1.0

NR4A2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1	2B	59,004,662 - 59,016,460 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	43,584,835 - 43,593,118 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	160,828,823 - 160,837,162 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	160,826,091 - 160,837,162 (-)	Ensembl	panpan1.1		panPan2

NR4A2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	36	2,546,237 - 2,554,559 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	36	2,547,421 - 2,552,780 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	36	2,678,764 - 2,696,690 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	36	2,664,920 - 2,682,769 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	36	2,665,580 - 2,671,459 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	36	2,663,962 - 2,681,849 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	36	2,724,009 - 2,741,835 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	36	2,763,654 - 2,781,495 (-)	NCBI		UU_Cfam_GSD_1.0

Nr4a2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	119,697,239 - 119,705,622 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936469	21,912,047 - 21,920,486 (+)	Ensembl	SpeTri2.0
SpeTri2.0	NW_004936469	21,912,118 - 21,920,486 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NR4A2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	63,487,731 - 63,495,299 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	15	63,487,051 - 63,506,249 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	70,671,034 - 70,689,181 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

NR4A2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	41,715,092 - 41,724,411 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	41,715,086 - 41,723,685 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	157,834,500 - 157,843,891 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Nr4a2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624732	9,581,779 - 9,589,942 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624732	9,572,160 - 9,589,624 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Nr4a2
48 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	91
Count of miRNA genes:	60
Interacting mature miRNAs:	76
Transcripts:	ENSRNOT00000041394
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2290452	Scl56	Serum cholesterol level QTL 56	2.26		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	3	1	91609953	Rat
10401810	Kidm53	Kidney mass QTL 53			kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	3	8227194	47233430	Rat
70191	BpQTLcluster4	Blood pressure QTL cluster 4	3		arterial blood pressure trait (VT:2000000)	absolute change in mean arterial blood pressure (CMO:0000533)	3	10778704	50302886	Rat
70191	BpQTLcluster4	Blood pressure QTL cluster 4	3		arterial blood pressure trait (VT:2000000)	absolute change in systolic blood pressure (CMO:0000607)	3	10778704	50302886	Rat
1358905	Hrtrt17	Heart rate QTL 17	5.9	0.000014	heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	3	10861912	89878372	Rat
1358885	Bp251	Blood pressure QTL 251	3.8		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	14489145	121056321	Rat
1358888	Bp264	Blood pressure QTL 264	4.43		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	14489145	121056321	Rat
2298542	Neuinf11	Neuroinflammation QTL 11	3.9		nervous system integrity trait (VT:0010566)	spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126)	3	15005422	76927699	Rat
631676	Cm8	Cardiac mass QTL 8	7.03	0.0001	aorta mass (VT:0002845)	aorta weight (CMO:0000076)	3	16954708	61954708	Rat
731172	Bp151	Blood pressure QTL 151		0.04	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	18311454	47233430	Rat
12879849	Bw180	Body weight QTL 180		0.037	body mass (VT:0001259)	body weight (CMO:0000012)	3	18311454	47233430	Rat
12879850	Cm91	Cardiac mass QTL 91		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	3	18311454	47233430	Rat
12879851	Cm92	Cardiac mass QTL 92		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	3	18311454	47233430	Rat
12879852	Cm93	Cardiac mass QTL 93		0.001	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	3	18311454	47233430	Rat
12879853	Am5	Aortic mass QTL 5		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	3	18311454	47233430	Rat
12879854	Kidm63	Kidney mass QTL 63		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	3	18311454	47233430	Rat
10450804	Scl70	Serum cholesterol level QTL 70	4.7	0.001	blood LDL cholesterol amount (VT:0000181)	blood low density lipoprotein cholesterol level (CMO:0000053)	3	20714090	65714090	Rat
10450794	Scl69	Serum cholesterol level QTL 69	6.3	0.001	blood LDL cholesterol amount (VT:0000181)	blood low density lipoprotein cholesterol level (CMO:0000053)	3	20714090	65714090	Rat
631832	Sach1	Saccharin preference QTL 1	2.7	0.02	consumption behavior trait (VT:0002069)	calculated saccharin drink intake volume (CMO:0001600)	3	27494621	44188411	Rat
2313049	Bss72	Bone structure and strength QTL 72	2.6	0.0001	tibia area (VT:1000281)	tibia midshaft cross-sectional area (CMO:0001717)	3	27494621	50302886	Rat
2313076	Bss74	Bone structure and strength QTL 74	2	0.0001	tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	3	27494621	50302886	Rat
2313079	Bss73	Bone structure and strength QTL 73	1.5		tibia size trait (VT:0100001)	tibia midshaft cross-sectional area (CMO:0001717)	3	27494621	50302886	Rat
2313093	Bmd77	Bone mineral density QTL 77	2.2	0.0001	tibia mineral mass (VT:1000283)	compact volumetric bone mineral density (CMO:0001730)	3	27494621	50302886	Rat
2313101	Bmd76	Bone mineral density QTL 76	3.6	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	3	27494621	50302886	Rat
2302055	Pia30	Pristane induced arthritis QTL 30	3.5	0.001	blood autoantibody amount (VT:0003725)	serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)	3	27936919	72936919	Rat
9590286	Uminl1	Urine mineral level QTL 1	3.5	0.001	urine mineral amount (VT:0015086)	urine electrolyte level (CMO:0000593)	3	28249687	73249687	Rat
8694196	Abfw2	Abdominal fat weight QTL 2	16.58	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	3	28249687	73249687	Rat
8694386	Bw159	Body weight QTL 159	4.52	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	3	28249687	73249687	Rat
8552950	Pigfal12	Plasma insulin-like growth factor 1 level QTL 12	7.3		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	3	28249687	73249687	Rat
9590136	Scort3	Serum corticosterone level QTL 3	23.37	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	3	28249687	73249687	Rat
2303593	Gluco46	Glucose level QTL 46	3		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	3	28468571	73468571	Rat
1354590	Despr11	Despair related QTL 11		0.000031	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	3	28468571	73468571	Rat
737818	Hcar12	Hepatocarcinoma resistance QTL 12	2.6		liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	3	29463235	118376539	Rat
61419	Cia11	Collagen induced arthritis QTL 11	5.6		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	3	30356773	98535386	Rat
61356	Bp37	Blood pressure QTL 37	3		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	3	30684642	75684642	Rat
631647	Bp122	Blood pressure QTL 122	6.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	30684642	75684642	Rat
70216	Cm14	Cardiac mass QTL 14	2.1		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	31172320	163586636	Rat
11565451	Bw177	Body weight QTL 177		0.002	body mass (VT:0001259)	body weight (CMO:0000012)	3	31426403	70668733	Rat
11565452	Kidm57	Kidney mass QTL 57		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	3	31426403	70668733	Rat
12879866	Cm94	Cardiac mass QTL 94		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	3	31426403	70668733	Rat
12879867	Cm95	Cardiac mass QTL 95		0.047	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	3	31426403	70668733	Rat
12879868	Am6	Aortic mass QTL 6		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	3	31426403	70668733	Rat
2301400	Cm68	Cardiac mass QTL 68		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	3	31426403	70668733	Rat
1300169	Bp177	Blood pressure QTL 177	2.96		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	3	33703347	61017857	Rat
1354589	Bw31	Body weight QTL 31	3.3		body mass (VT:0001259)	body weight (CMO:0000012)	3	33703347	78196190	Rat
1354604	Bw36	Body weight QTL 36	2.9		body mass (VT:0001259)	body weight (CMO:0000012)	3	33703347	104104347	Rat
10450852	Stl33	Serum triglyceride level QTL 33	3.4	0.05	blood LDL triglyceride amount (VT:0010699)	blood lipoprotein triglyceride level (CMO:0002685)	3	38192233	50749747	Rat
10450816	Scl75	Serum cholesterol level QTL 75	4.4	0.001	blood LDL cholesterol amount (VT:0000181)	blood low density lipoprotein cholesterol level (CMO:0000053)	3	38192233	50749747	Rat
10450813	Scl74	Serum cholesterol level QTL 74	5.8	0.001	blood LDL cholesterol amount (VT:0000181)	blood low density lipoprotein cholesterol level (CMO:0000053)	3	38192233	50749747	Rat
1358362	Srcrt2	Stress Responsive Cort QTL 2	2.78		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	3	38192233	133483320	Rat
738019	Anxrr10	Anxiety related response QTL 10	3.9		exploratory behavior trait (VT:0010471)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	3	38517803	83517803	Rat
4889975	Bmd81	Bone mineral density QTL 81	4.3		tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	3	38710365	50302886	Rat
634317	Bw117	Body weight QTL 117	3.58		abdominal fat pad mass (VT:1000711)	abdominal fat pad weight to body weight ratio (CMO:0000095)	3	39454637	53296578	Rat
2302276	Bw82	Body weight QTL 82	4.32		body mass (VT:0001259)	body weight (CMO:0000012)	3	39454637	62951183	Rat
1331777	Bw24	Body weight QTL 24	3.503		body mass (VT:0001259)	body weight (CMO:0000012)	3	39454637	89115240	Rat
1331795	Rf30	Renal function QTL 30	3.708		urine potassium amount (VT:0010539)	urine potassium level (CMO:0000128)	3	39454637	89115240	Rat

Markers in Region

D3Wox30

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	41,690,710 - 41,690,851 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	43,112,122 - 43,112,262	NCBI	Rnor6.0
Rnor_5.0	3	48,183,970 - 48,184,110	UniSTS	Rnor5.0
RGSC_v3.4	3	38,866,394 - 38,866,534	UniSTS	RGSC3.4
Celera	3	39,783,493 - 39,783,633	UniSTS
Cytogenetic Map	3	q12	UniSTS

RH138091

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	41,690,619 - 41,690,749 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	43,112,031 - 43,112,160	NCBI	Rnor6.0
Rnor_5.0	3	48,183,879 - 48,184,008	UniSTS	Rnor5.0
RGSC_v3.4	3	38,866,303 - 38,866,432	UniSTS	RGSC3.4
Celera	3	39,783,402 - 39,783,531	UniSTS
RH 3.4 Map	3	538.0	UniSTS
Cytogenetic Map	3	q12	UniSTS

PMC109903P2

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	41,691,611 - 41,692,285 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	43,113,023 - 43,113,696	NCBI	Rnor6.0
Rnor_5.0	3	48,184,871 - 48,185,544	UniSTS	Rnor5.0
RGSC_v3.4	3	38,867,295 - 38,867,968	UniSTS	RGSC3.4
Celera	3	39,784,394 - 39,785,067	UniSTS
Cytogenetic Map	3	q12	UniSTS

Nr4a2

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	41,691,415 - 41,691,642 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	43,112,827 - 43,113,053	NCBI	Rnor6.0
Rnor_5.0	3	48,184,675 - 48,184,901	UniSTS	Rnor5.0
RGSC_v3.4	3	38,867,099 - 38,867,325	UniSTS	RGSC3.4
Celera	3	39,784,198 - 39,784,424	UniSTS
Cytogenetic Map	3	q12	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium									58
Low	3	41	47	31	19	31	7	7	16	35	41	11	7
Below cutoff		2	10	10		10	1	4					1

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_019328	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006234201	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591997	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105737	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105738	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005501972	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_352325	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AW534944	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CB606493	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473983	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DQ092629	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DQ092630	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DQ092631	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DQ092632	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DQ092633	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DQ092634	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ222109	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000115	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	L08595	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	L19343	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	U01146	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	U72345	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000041394 ⟹ ENSRNOP00000043812

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	41,689,851 - 41,697,877 (-)	Ensembl
Rnor_6.0 Ensembl	3	43,111,240 - 43,119,159 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000078001 ⟹ ENSRNOP00000072142

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	41,691,186 - 41,695,926 (-)	Ensembl
Rnor_6.0 Ensembl	3	43,112,597 - 43,117,337 (-)	Ensembl

RefSeq Acc Id:

NM_019328 ⟹ NP_062201

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	41,690,522 - 41,695,995 (-)	NCBI
Rnor_6.0	3	43,111,933 - 43,117,406 (-)	NCBI
Rnor_5.0	3	48,183,106 - 48,192,467 (-)	NCBI
RGSC_v3.4	3	38,866,205 - 38,871,678 (-)	RGD
Celera	3	39,783,304 - 39,788,777 (-)	RGD

Sequence:

show sequence

TGGATCCCCAAATTGCTTTTTAAAAAATATCTTGGAAACTTTGTCCTTTGCTGAATTACGACAC
TGTCCACCTTTAATTTCCTCGAAAACTCCAATCACTCGGCTGAAGCCATGCCTTGTGTTCAGGC
GCAGTATGGGTCCTCGCCTCAAGGAGCCAGCCCCGCTTCTCAGAGCTACAGTTACCACTCTTCG
GGAGAATACAGCTCCGATTTCTTAACTCCAGAGTTTGTCAAGTTTAGCATGGACCTCACCAACA
CTGAAATTACTGCCACCACTTCTCTCCCCAGCTTCAGTACCTTTATGGACAACTACAGCACAGG
CTACGACGTCAAGCCACCTTGCTTGTACCAAATGCCCCTGTCCGGACAGCAGTCCTCCATTAAG
GTAGAAGACATTCAGATGCACAACTACCAGCAACACAGCCACCTGCCCCCTCAGTCCGAGGAGA
TGATGCCACACAGCGGGTCGGTTTACTACAAGCCCTCTTCGCCCCCGACACCCAGCACCCCGGG
CTTCCAGGTGCAGCATAGCCCGATGTGGGACGATCCGGGCTCCCTTCACAACTTCCACCAGAAC
TACGTGGCCACTACGCATATGATCGAGCAGAGGAAGACACCTGTCTCCCGCCTTTCACTCTTCT
CCTTTAAGCAGTCGCCCCCGGGCACTCCTGTGTCTAGCTGCCAGATGCGCTTTGACGGGCCTCT
GCACGTCCCCATGAACCCGGAGCCCGCGGGCAGCCACCACGTAGTGGATGGGCAGACCTTCGCC
GTGCCCAATCCCATTCGCAAGCCGGCATCCATGGGCTTCCCGGGCCTGCAGATCGGCCACGCGT
CGCAGTTGCTTGACACGCAGGTGCCCTCGCCGCCGTCCCGGGGCTCTCCCTCCAATGAGGGTCT
GTGCGCTGTTTGCGGTGACAACGCGGCCTGTCAGCATTACGGTGTTCGCACTTGTGAGGGCTGC
AAAGGTTTCTTTAAGCGCACGGTGCAAAAAAACGCGAAATATGTGTGTTTAGCAAATAAAAATT
GCCCAGTGGATAAGCGCCGCCGAAATCGTTGTCAGTACTGTCGGTTTCAGAAGTGCCTGGCTGT
TGGGATGGTTAAAGAAGTGGTTCGCACGGACAGTTTAAAAGGCCGGAGAGGTCGTCTACCCTCA
AAACCGAAGAGCCCACAGGATCCCTCTCCCCCCTCACCTCCGGTGAGTCTGATCAGTGCCCTCG
TCAGAGCCCACGTCGACTCCAATCCGGCAATGACCAGCCTGGACTATTCCAGGTTCCAGGCAAA
CCCTGACTATCAGATGAGTGGAGATGATACTCAACATATCCAGCAGTTCTACGATCTCCTGACT
GGCTCTATGGAGATCATCAGAGGGTGGGCAGAGAAGATTCCTGGCTTTGCTGACCTGCCCAAAG
CCGATCAGGACCTGCTTTTTGAATCAGCTTTCTTAGAATTATTTGTTCTACGCTTAGCATACAG
GTCCAACCCAGTGGAGGGTAAACTCATCTTTTGCAATGGGGTGGTCTTGCACAGGTTGCAATGC
GTGCGTGGCTTTGGGGAATGGATTGATTCCATTGTTGAATTCTCCTCCAACTTGCAGAATATGA
ACATCGACATTTCTGCCTTCTCCTGCATTGCTGCCCTGGCTATGGTCACAGAGAGACACGGGCT
CAAGGAACCCAAGAGAGTGGAAGAGCTACAAAACAAAATTGTAAATTGTCTTAAAGACCATGTG
ACTTTCAATAATGGGGGATTGAACCGACCCAACTACCTGTCCAAACTGTTGGGGAAGCTCCCAG
AACTTCGCACCCTTTGCACACAGGGGCTCCAGCGCATTTTCTACCTGAAATTGGAAGACTTGGT
ACCACCACCAGCAATAATTGACAAACTTTTCCTGGACACCTTACCTTTCTAAGACTTTCTCCCA
TGCACGTCAAAGAACTGGAAAGAAAAAAAAAATCCAGAGGGGGCTGGTCAAGATGGGTAGAGAG
CTGGCTGAAGTGTCCGGTTCATGTCTCCCTTCTGTAGACCCCTAGCCCTCACCCCTAAAGTAAA
CAAACAAACAAGCAAACAAACAAACACAAATTAAAAACTGTTGCTATTTCCTAACCTGCAGGCA
GAACGTGAAAGGGCATTTTGGCTCCGGGGCATCCTGGATTTAGAAAACGGACAACATACACAGT
ACAGTGGTATAAACTTTTTTATTATCAGTTCAAAATCAGTTTATTGTTCAGAAGGAAGATTGCA
AATGTATGATGGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAAGGCAAAT
GTAACACACACACACACACACACACACACACACACACACACACACCTCTTAATGGGACCCTCAT
ATTTTGCCCTTTAACAAGACTTCAAAGTTTTCTGCTGTAAAGAAAGCTGTAATATATAGTAAAA
CTAAATGTTGCGTGGGTGGCATGAATTGAAGGCAGAGGCTTGTAAATTTTATCCAATGCAGTTT
GGCTTTTTAAATTATTTTGTGCCTATTTATGAATAAATATTACAAATTCTAAAAAGTAAGTGTG
TTTGCAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006234201 ⟹ XP_006234263

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	41,689,847 - 41,697,856 (-)	NCBI
Rnor_6.0	3	43,111,933 - 43,122,218 (-)	NCBI
Rnor_5.0	3	48,183,106 - 48,192,467 (-)	NCBI

Sequence:

show sequence

GTGTGTTGAGCGCGCATGCATGTGTATTTGTGTAGGAGATTGTCTCTTGAACATTGTGGAGTCA
GGCCCCCTACTGACAAGATCAGTCAATTGCAGACCTTGTCTTTGCTCCTGCAGCTTCGTCCTTC
CCAATCAAGTGGGGAAAAACAGCGTGGTTCTTTTAAACTTTCCAATGTGTGCACTCTATCCTTC
CCACCTGAAGTATATGCGAGCCCTGACCCAAACTCCAACCGTAGAATAGACTCAGCCCAAGAAT
TACTTTAAATGAGTTTATGAGTCTTTCCTCAATAGTAGTAACATCCAGAGAACACAAATTTGAA
AAGAGGGAAAACTCACACATGGATGAAAAAAAAAAGTCTCCACTTCCTCTCATTTACATGTTGT
AATTACCCCATTCTCACTTATTATTGTAGTAAATTGCTATGACCGCTGCCTTTTGATCTCGGGT
ATAACAAGGCTTGAGCAAAGGCTTTTCTTATCAGGAAACCAAGCACTGGAGGTTGCTAAAGAAT
AACCCTCGTTACTGTGCTTGTTCCGTGCTGTTCAGTATAAGAACTCCAGGCCCTCTTTCCCCTC
TCTAGGAGAGCATTTTCAAAATGTTCCCATACTCAACTCAACCCAAACTGAATGTGTTTTTAAT
GACTCGGAGAGGAGCTTGCAGAGGGCAACAGATCTACTTAGCCGCTTTTGTGTTGGGAGGTCTG
TGGCTACGACCTTAAACTCCTGATACCCGCTCTCCTGGAACTGTATTAAAAAATAATAACTTCC
ACCCCAGTGTCACTGAGCTTGGGTTTCCGACTGTCTGAAAATAGCTGCCGGGAACCTGGCCCAC
CGCGAGGATCAAGGAAAGCTCCTGGTGACCGCACCCTGCTCCCTCACGGAAGGGGAAGGGAACC
CGGGAGGGCGCCTGTGAGCTGGAGTTGCTTCTATTTTGGGCCCAGCCTGGCCGGTGCGTCAATG
CCTGCGCCCCTGCGTCACCGCCACCCCCACCCCCTTCCTTCTCCATTGCTCTCCAAACTCTCAC
TTTTTCCCTTTCGTTCGCGTGGAATCGCTTCTGCCCACGGGGCGCTGACGCTGCCGAGCTCACA
CTAATAAGTTGTTCTTTACCCTGCCCCCCCTTGCACCCCACCCCCACTTCCTGGTTGTTGTTGT
TTTTCCCTCGCGCCCATTAGGGCACTGCTGAGCCATAGCGGCAGCCGCTGGAGAGGCAGCCGCA
ACATCTGGGGGAAACTTAAGGTGGTCACGTAGGTTTCCCGGAGGCTGATGCACAGTGGAGCCCG
CGGCGAGTCTGGGCAGCCGCAGGGCACCCGATGGCAACGCCTCTGCAGCCGCAGGCTCGCTCGG
CGTGGAGCCGGCTTAGGCGGAGGTGCAGGCTAGGAATGAGCAACCCCACAACCCCGAGAGTTCC
GCCGAGCTCTCCGCTGGTGCTAGGATCACCGAGAGGGGGCCGAACTGTACATTGCACACACACA
CACACACACACACACACACACACACACCCAACCGCTCGCCCGGGCAGCTAGGATCACCGAGAGG
GGGCCGAACTGTACATTGCACACACACACACACACACACACACACACACACACACACACACACA
CCCAACCGCTCGCCCGGGCAGCTTGGGAGAGAGCCGACGCTCGGGAGGAGGGGAGGAGGAGCGC
TGTCCTGGGCGAAGAAGGGGACCCTACAAAGTCTCCCTTCCTTGGCCTCAGCCCCTTCTTGGCC
TCGAGAGAAACCCGAAGAGGCCTGTCTAGCCAGCTTCACCCGCGTACTGGGAATAGGTATAGCC
CTCCGGAGAAGCTGCAATTCCTTTGCTAGAAAGATCCACGCGCTTGGGGGCGCGGATTGTCTGG
CAGAGCAGAGCTGGAGGCAACTGAGAGGACCGCGGGGGTAGGGCACGCTCACACAGCTCACGGG
GACCCCAGGCTGAGGCAATGGGCACATACACACTCGGTTCGGAGAGACGCGGAGCGGCCCACTA
CCGCCTCGAGCTCCACTCTCCTTGCCGCTTCCACCTCCGTGCTTTCTCCTTGGTTGCGGGTACC
ACATCCCCTGCGTTTCAGAAACCCTGAAGGGACTGAAGGGTCTTGGTGGGCACAGCGAAATGTC
AACGCTATTAAGAGTTGACCGAGGGGGTGGGGGGCTGTGGATCAGATCACCTTTCGAGCGGAGG
CGCACCTGTTGCCCAATTCTTTAATGCATTGTCTGCGAGAGAAAAGCAGGCAACAGTTCATTCC
TACTTGTGGGGTCTTCTAAGGCCTGGCTCAGTGTCTACCCTCATTTCCTCCCACACTGCTTTAG
GTAACATATCTCTTTAGTTTCAGGAAAAAGGGGGGAAGAAAATTAGACCCTGACCCCTCATCCC
TCGAAGCGGGGAGTAAGAGTGGGTTTTAAAGAGGGAGAGGGGGATGCGCGGACTAGGGGAATCC
CATCTAACGCCCAAGCCTTTGGAGAGTTACAGTCACGGGACAACTGTCTCCGCTTCTGCTAAGG
AGTGTGTGGAGGGTGTGTTGGGAGGCTGCAGGGCACACCTCTGCCGGCTCGGCCCAGGTGCCAG
CTACCTGGCCCACGCCAACGTTCTTTTCCGTTCAAGCTTTTGTTGCACCCTCCCCACGTGTGAG
GACTCAGGGTCGGGGGTGGGGTGGTGGGGCAGGTAGAGTGTAGCATCGCTGCGGGCTCCACGGA
CCCGGGTTGCAGAAGTCACACTTCTTTCGGAAAAAAAAAAATCCACCCAAGTGGGCTACCAAGG
TGAACTGTTCCCACCTTAAAATCAGCCCCAGTCGTGACGTCAGGTCGGAAATATACCAAAGCGA
GCGCGGGCCAGGAGTCCGGGGAGCGCGGCGGCTCGGCGATTGGACCGTGGGCCGCTGACGCGGG
CTGACGCGCGCAGACTTTAGGTGCATGTTGGCAGCAGCAGCGCGAGCCACATAAACAAAGGCAC
ATTGGCGGCCAGGGCCAGTCCGCCCCGCGGCTCCGCACGGCTCTGCGTCCCTCTCTCCTGCCCA
GCCGGCTGCCTCCCTCTCCTGCGGCCGGGCTGGCTGCGTGTGGCTCTCCGCGCCCCGCTCCCGC
AGCGCTCCAGCGGACCCCGGCTCCTCTGCTCCCGGAGGGAACTGCACTTCGGCGGAGTTGAATG
AATGAAGAGAGCGGAGAAGGAGATCTGACGGGCTGGATCCCCAAATTGCTTTTTAAAAAATATC
TTGGAAACTTTGTCCTTTGCTGAATTACGACACTGTCCACCTTTAATTTCCTCGAAAACTCCAA
TCACTCGGCTGAAGCCATGCCTTGTGTTCAGGCGCAGTATGGGTCCTCGCCTCAAGGAGCCAGC
CCCGCTTCTCAGAGCTACAGTTACCACTCTTCGGGAGAATACAGCTCCGATTTCTTAACTCCAG
AGTTTGTCAAGTTTAGCATGGACCTCACCAACACTGAAATTACTGCCACCACTTCTCTCCCCAG
CTTCAGTACCTTTATGGACAACTACAGCACAGGCTACGACGTCAAGCCACCTTGCTTGTACCAA
ATGCCCCTGTCCGGACAGCAGTCCTCCATTAAGGTAGAAGACATTCAGATGCACAACTACCAGC
AACACAGCCACCTGCCCCCTCAGTCCGAGGAGATGATGCCACACAGCGGGTCGGTTTACTACAA
GCCCTCTTCGCCCCCGACACCCAGCACCCCGGGCTTCCAGGTGCAGCATAGCCCGATGTGGGAC
GATCCGGGCTCCCTTCACAACTTCCACCAGAACTACGTGGCCACTACGCATATGATCGAGCAGA
GGAAGACACCTGTCTCCCGCCTTTCACTCTTCTCCTTTAAGCAGTCGCCCCCGGGCACTCCTGT
GTCTAGCTGCCAGATGCGCTTTGACGGGCCTCTGCACGTCCCCATGAACCCGGAGCCCGCGGGC
AGCCACCACGTAGTGGATGGGCAGACCTTCGCCGTGCCCAATCCCATTCGCAAGCCGGCATCCA
TGGGCTTCCCGGGCCTGCAGATCGGCCACGCGTCGCAGTTGCTTGACACGCAGGTGCCCTCGCC
GCCGTCCCGGGGCTCTCCCTCCAATGAGGGTCTGTGCGCTGTTTGCGGTGACAACGCGGCCTGT
CAGCATTACGGTGTTCGCACTTGTGAGGGCTGCAAAGGTTTCTTTAAGCGCACGGTGCAAAAAA
ACGCGAAATATGTGTGTTTAGCAAATAAAAATTGCCCAGTGGATAAGCGCCGCCGAAATCGTTG
TCAGTACTGTCGGTTTCAGAAGTGCCTGGCTGTTGGGATGGTTAAAGAAGTGGTTCGCACGGAC
AGTTTAAAAGGCCGGAGAGGTCGTCTACCCTCAAAACCGAAGAGCCCACAGGATCCCTCTCCCC
CCTCACCTCCGGTGAGTCTGATCAGTGCCCTCGTCAGAGCCCACGTCGACTCCAATCCGGCAAT
GACCAGCCTGGACTATTCCAGGTTCCAGGCAAACCCTGACTATCAGATGAGTGGAGATGATACT
CAACATATCCAGCAGTTCTACGATCTCCTGACTGGCTCTATGGAGATCATCAGAGGGTGGGCAG
AGAAGATTCCTGGCTTTGCTGACCTGCCCAAAGCCGATCAGGACCTGCTTTTTGAATCAGCTTT
CTTAGAATTATTTGTTCTACGCTTAGCATACAGGTCCAACCCAGTGGAGGGTAAACTCATCTTT
TGCAATGGGGTGGTCTTGCACAGGTTGCAATGCGTGCGTGGCTTTGGGGAATGGATTGATTCCA
TTGTTGAATTCTCCTCCAACTTGCAGAATATGAACATCGACATTTCTGCCTTCTCCTGCATTGC
TGCCCTGGCTATGGTCACAGAGAGACACGGGCTCAAGGAACCCAAGAGAGTGGAAGAGCTACAA
AACAAAATTGTAAATTGTCTTAAAGACCATGTGACTTTCAATAATGGGGGATTGAACCGACCCA
ACTACCTGTCCAAACTGTTGGGGAAGCTCCCAGAACTTCGCACCCTTTGCACACAGGGGCTCCA
GCGCATTTTCTACCTGAAATTGGAAGACTTGGTACCACCACCAGCAATAATTGACAAACTTTTC
CTGGACACCTTACCTTTCTAAGACTTTCTCCCATGCACGTCAAAGAACTGGAAAGAAAAAAAAA
ATCCAGAGGGGGCTGGTCAAGATGGGTAGAGAGCTGGCTGAAGTGTCCGGTTCATGTCTCCCTT
CTGTAGACCCCTAGCCCTCACCCCTAAAGTAAACAAACAAACAAGCAAACAAACAAACACAAAT
TAAAAACTGTTGCTATTTCCTAACCTGCAGGCAGAACGTGAAAGGGCATTTTGGCTCCGGGGCA
TCCTGGATTTAGAAAACGGACAACATACACAGTACAGTGGTATAAACTTTTTTATTATCAGTTC
AAAATCAGTTTATTGTTCAGAAGGAAGATTGCAAATGTATGATGGGAAATGTTTGGCCATGCTT
GCTTGTTGCAGTTAAGACAAATGTAAGGCAAATGTAACACACACACACACACACACACACACAC
ACACACACACACACCTCTTAATGGGACCCTCATATTTTGCCCTTTAACAAGACTTCAAAGTTTT
CTGCTGTAAAGAAAGCTGTAATATATAGTAAAACTAAATGTTGCGTGGGTGGCATGAATTGAAG
GCAGAGGCTTGTAAATTTTATCCAATGCAGTTTGGCTTTTTAAATTATTTTGTGCCTATTTATG
AATAAATATTACAAATTCTAAAAAGTAAGTGTGTTTGCAAAAAAA

hide sequence

RefSeq Acc Id:

XM_017591997 ⟹ XP_017447486

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	41,689,847 - 41,707,036 (-)	NCBI
Rnor_6.0	3	43,111,933 - 43,128,391 (-)	NCBI

Sequence:

show sequence

CCGGACTGCAGGAAGAGCTGGAGCCGGGCTGCTCGACCACTCCGCGCCCGGGGACGCGGCGACC
TGGGGCCCGGAGCGCTGGGCAGGGAGATCTGACGGGCTGGATCCCCAAATTGCTTTTTAAAAAA
TATCTTGGAAACTTTGTCCTTTGCTGAATTACGACACTGTCCACCTTTAATTTCCTCGAAAACT
CCAATCACTCGGCTGAAGCCATGCCTTGTGTTCAGGCGCAGTATGGGTCCTCGCCTCAAGGAGC
CAGCCCCGCTTCTCAGAGCTACAGTTACCACTCTTCGGGAGAATACAGCTCCGATTTCTTAACT
CCAGAGTTTGTCAAGTTTAGCATGGACCTCACCAACACTGAAATTACTGCCACCACTTCTCTCC
CCAGCTTCAGTACCTTTATGGACAACTACAGCACAGGCTACGACGTCAAGCCACCTTGCTTGTA
CCAAATGCCCCTGTCCGGACAGCAGTCCTCCATTAAGGTAGAAGACATTCAGATGCACAACTAC
CAGCAACACAGCCACCTGCCCCCTCAGTCCGAGGAGATGATGCCACACAGCGGGTCGGTTTACT
ACAAGCCCTCTTCGCCCCCGACACCCAGCACCCCGGGCTTCCAGGTGCAGCATAGCCCGATGTG
GGACGATCCGGGCTCCCTTCACAACTTCCACCAGAACTACGTGGCCACTACGCATATGATCGAG
CAGAGGAAGACACCTGTCTCCCGCCTTTCACTCTTCTCCTTTAAGCAGTCGCCCCCGGGCACTC
CTGTGTCTAGCTGCCAGATGCGCTTTGACGGGCCTCTGCACGTCCCCATGAACCCGGAGCCCGC
GGGCAGCCACCACGTAGTGGATGGGCAGACCTTCGCCGTGCCCAATCCCATTCGCAAGCCGGCA
TCCATGGGCTTCCCGGGCCTGCAGATCGGCCACGCGTCGCAGTTGCTTGACACGCAGGTGCCCT
CGCCGCCGTCCCGGGGCTCTCCCTCCAATGAGGGTCTGTGCGCTGTTTGCGGTGACAACGCGGC
CTGTCAGCATTACGGTGTTCGCACTTGTGAGGGCTGCAAAGGTTTCTTTAAGCGCACGGTGCAA
AAAAACGCGAAATATGTGTGTTTAGCAAATAAAAATTGCCCAGTGGATAAGCGCCGCCGAAATC
GTTGTCAGTACTGTCGGTTTCAGAAGTGCCTGGCTGTTGGGATGGTTAAAGAAGTGGTTCGCAC
GGACAGTTTAAAAGGCCGGAGAGGTCGTCTACCCTCAAAACCGAAGAGCCCACAGGATCCCTCT
CCCCCCTCACCTCCGGTGAGTCTGATCAGTGCCCTCGTCAGAGCCCACGTCGACTCCAATCCGG
CAATGACCAGCCTGGACTATTCCAGGTTCCAGGCAAACCCTGACTATCAGATGAGTGGAGATGA
TACTCAACATATCCAGCAGTTCTACGATCTCCTGACTGGCTCTATGGAGATCATCAGAGGGTGG
GCAGAGAAGATTCCTGGCTTTGCTGACCTGCCCAAAGCCGATCAGGACCTGCTTTTTGAATCAG
CTTTCTTAGAATTATTTGTTCTACGCTTAGCATACAGGTCCAACCCAGTGGAGGGTAAACTCAT
CTTTTGCAATGGGGTGGTCTTGCACAGGTTGCAATGCGTGCGTGGCTTTGGGGAATGGATTGAT
TCCATTGTTGAATTCTCCTCCAACTTGCAGAATATGAACATCGACATTTCTGCCTTCTCCTGCA
TTGCTGCCCTGGCTATGGTCACAGAGAGACACGGGCTCAAGGAACCCAAGAGAGTGGAAGAGCT
ACAAAACAAAATTGTAAATTGTCTTAAAGACCATGTGACTTTCAATAATGGGGGATTGAACCGA
CCCAACTACCTGTCCAAACTGTTGGGGAAGCTCCCAGAACTTCGCACCCTTTGCACACAGGGGC
TCCAGCGCATTTTCTACCTGAAATTGGAAGACTTGGTACCACCACCAGCAATAATTGACAAACT
TTTCCTGGACACCTTACCTTTCTAAGACTTTCTCCCATGCACGTCAAAGAACTGGAAAGAAAAA
AAAAATCCAGAGGGGGCTGGTCAAGATGGGTAGAGAGCTGGCTGAAGTGTCCGGTTCATGTCTC
CCTTCTGTAGACCCCTAGCCCTCACCCCTAAAGTAAACAAACAAACAAGCAAACAAACAAACAC
AAATTAAAAACTGTTGCTATTTCCTAACCTGCAGGCAGAACGTGAAAGGGCATTTTGGCTCCGG
GGCATCCTGGATTTAGAAAACGGACAACATACACAGTACAGTGGTATAAACTTTTTTATTATCA
GTTCAAAATCAGTTTATTGTTCAGAAGGAAGATTGCAAATGTATGATGGGAAATGTTTGGCCAT
GCTTGCTTGTTGCAGTTAAGACAAATGTAAGGCAAATGTAACACACACACACACACACACACAC
ACACACACACACACACACCTCTTAATGGGACCCTCATATTTTGCCCTTTAACAAGACTTCAAAG
TTTTCTGCTGTAAAGAAAGCTGTAATATATAGTAAAACTAAATGTTGCGTGGGTGGCATGAATT
GAAGGCAGAGGCTTGTAAATTTTATCCAATGCAGTTTGGCTTTTTAAATTATTTTGTGCCTATT
TATGAATAAATATTACAAATTCTAAAAAGTAAGTGTGTTTGCAAAAAAA

hide sequence

RefSeq Acc Id:

XM_039105737 ⟹ XP_038961665

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	41,689,847 - 41,697,444 (-)	NCBI

RefSeq Acc Id:

XM_039105738 ⟹ XP_038961666

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	41,689,847 - 41,697,790 (-)	NCBI

RefSeq Acc Id:

XR_005501972

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	41,691,361 - 41,697,790 (-)	NCBI

RefSeq Acc Id:

XR_352325

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	41,689,847 - 41,697,873 (-)	NCBI
Rnor_6.0	3	43,111,258 - 43,122,218 (-)	NCBI
Rnor_5.0	3	48,183,106 - 48,192,467 (-)	NCBI

Sequence:

show sequence

GTGTGTTGAGCGCGCATGCATGTGTATTTGTGTAGGAGATTGTCTCTTGAACATTGTGGAGTCA
GGCCCCCTACTGACAAGATCAGTCAATTGCAGACCTTGTCTTTGCTCCTGCAGCTTCGTCCTTC
CCAATCAAGTGGGGAAAAACAGCGTGGTTCTTTTAAACTTTCCAATGTGTGCACTCTATCCTTC
CCACCTGAAGTATATGCGAGCCCTGACCCAAACTCCAACCGTAGAATAGACTCAGCCCAAGAAT
TACTTTAAATGAGTTTATGAGTCTTTCCTCAATAGTAGTAACATCCAGAGAACACAAATTTGAA
AAGAGGGAAAACTCACACATGGATGAAAAAAAAAAGTCTCCACTTCCTCTCATTTACATGTTGT
AATTACCCCATTCTCACTTATTATTGTAGTAAATTGCTATGACCGCTGCCTTTTGATCTCGGGT
ATAACAAGGCTTGAGCAAAGGCTTTTCTTATCAGGAAACCAAGCACTGGAGGTTGCTAAAGAAT
AACCCTCGTTACTGTGCTTGTTCCGTGCTGTTCAGTATAAGAACTCCAGGCCCTCTTTCCCCTC
TCTAGGAGAGCATTTTCAAAATGTTCCCATACTCAACTCAACCCAAACTGAATGTGTTTTTAAT
GACTCGGAGAGGAGCTTGCAGAGGGCAACAGATCTACTTAGCCGCTTTTGTGTTGGGAGGTCTG
TGGCTACGACCTTAAACTCCTGATACCCGCTCTCCTGGAACTGTATTAAAAAATAATAACTTCC
ACCCCAGTGTCACTGAGCTTGGGTTTCCGACTGTCTGAAAATAGCTGCCGGGAACCTGGCCCAC
CGCGAGGATCAAGGAAAGCTCCTGGTGACCGCACCCTGCTCCCTCACGGAAGGGGAAGGGAACC
CGGGAGGGCGCCTGTGAGCTGGAGTTGCTTCTATTTTGGGCCCAGCCTGGCCGGTGCGTCAATG
CCTGCGCCCCTGCGTCACCGCCACCCCCACCCCCTTCCTTCTCCATTGCTCTCCAAACTCTCAC
TTTTTCCCTTTCGTTCGCGTGGAATCGCTTCTGCCCACGGGGCGCTGACGCTGCCGAGCTCACA
CTAATAAGTTGTTCTTTACCCTGCCCCCCCTTGCACCCCACCCCCACTTCCTGGTTGTTGTTGT
TTTTCCCTCGCGCCCATTAGGGCACTGCTGAGCCATAGCGGCAGCCGCTGGAGAGGCAGCCGCA
ACATCTGGGGGAAACTTAAGGTGGTCACGTAGGTTTCCCGGAGGCTGATGCACAGTGGAGCCCG
CGGCGAGTCTGGGCAGCCGCAGGGCACCCGATGGCAACGCCTCTGCAGCCGCAGGCTCGCTCGG
CGTGGAGCCGGCTTAGGCGGAGGTGCAGGCTAGGAATGAGCAACCCCACAACCCCGAGAGTTCC
GCCGAGCTCTCCGCTGGTGCTAGGATCACCGAGAGGGGGCCGAACTGTACATTGCACACACACA
CACACACACACACACACACACACACACCCAACCGCTCGCCCGGGCAGCTAGGATCACCGAGAGG
GGGCCGAACTGTACATTGCACACACACACACACACACACACACACACACACACACACACACACA
CCCAACCGCTCGCCCGGGCAGCTTGGGAGAGAGCCGACGCTCGGGAGGAGGGGAGGAGGAGCGC
TGTCCTGGGCGAAGAAGGGGACCCTACAAAGTCTCCCTTCCTTGGCCTCAGCCCCTTCTTGGCC
TCGAGAGAAACCCGAAGAGGCCTGTCTAGCCAGCTTCACCCGCGTACTGGGAATAGGTATAGCC
CTCCGGAGAAGCTGCAATTCCTTTGCTAGAAAGATCCACGCGCTTGGGGGCGCGGATTGTCTGG
CAGAGCAGAGCTGGAGGCAACTGAGAGGACCGCGGGGGTAGGGCACGCTCACACAGCTCACGGG
GACCCCAGGCTGAGGCAATGGGCACATACACACTCGGTTCGGAGAGACGCGGAGCGGCCCACTA
CCGCCTCGAGCTCCACTCTCCTTGCCGCTTCCACCTCCGTGCTTTCTCCTTGGTTGCGGGTACC
ACATCCCCTGCGTTTCAGAAACCCTGAAGGGACTGAAGGGTCTTGGTGGGCACAGCGAAATGTC
AACGCTATTAAGAGTTGACCGAGGGGGTGGGGGGCTGTGGATCAGATCACCTTTCGAGCGGAGG
CGCACCTGTTGCCCAATTCTTTAATGCATTGTCTGCGAGAGAAAAGCAGGCAACAGTTCATTCC
TACTTGTGGGGTCTTCTAAGGCCTGGCTCAGTGTCTACCCTCATTTCCTCCCACACTGCTTTAG
GTAACATATCTCTTTAGTTTCAGGAAAAAGGGGGGAAGAAAATTAGACCCTGACCCCTCATCCC
TCGAAGCGGGGAGTAAGAGTGGGTTTTAAAGAGGGAGAGGGGGATGCGCGGACTAGGGGAATCC
CATCTAACGCCCAAGCCTTTGGAGAGTTACAGTCACGGGACAACTGTCTCCGCTTCTGCTAAGG
AGTGTGTGGAGGGTGTGTTGGGAGGCTGCAGGGCACACCTCTGCCGGCTCGGCCCAGGTGCCAG
CTACCTGGCCCACGCCAACGTTCTTTTCCGTTCAAGCTTTTGTTGCACCCTCCCCACGTGTGAG
GACTCAGGGTCGGGGGTGGGGTGGTGGGGCAGGTAGAGTGTAGCATCGCTGCGGGCTCCACGGA
CCCGGGTTGCAGAAGTCACACTTCTTTCGGAAAAAAAAAAATCCACCCAAGTGGGCTACCAAGG
TGAACTGTTCCCACCTTAAAATCAGCCCCAGTCGTGACGTCAGGTCGGAAATATACCAAAGCGA
GCGCGGGCCAGGAGTCCGGGGAGCGCGGCGGCTCGGCGATTGGACCGTGGGCCGCTGACGCGGG
CTGACGCGCGCAGACTTTAGGTGCATGTTGGCAGCAGCAGCGCGAGCCACATAAACAAAGGCAC
ATTGGCGGCCAGGGCCAGTCCGCCCCGCGGCTCCGCACGGCTCTGCGTCCCTCTCTCCTGCCCA
GCCGGCTGCCTCCCTCTCCTGCGGCCGGGCTGGCTGCGTGTGGCTCTCCGCGCCCCGCTCCCGC
AGCGCTCCAGCGGACCCCGGCTCCTCTGCTCCCGGAGGGAACTGCACTTCGGCGGAGTTGAATG
AATGAAGAGAGCGGAGAAGGAGATCTGACGGGCTGGATCCCCAAATTGCTTTTTAAAAAATATC
TTGGAAACTTTGTCCTTTGCTGAATTACGACACTGTCCACCTTTAATTTCCTCGAAAACTCCAA
TCACTCGGCTGAAGCCATGCCTTGTGTTCAGGCGCAGTATGGGTCCTCGCCTCAAGGAGCCAGC
CCCGCTTCTCAGAGCTACAGTTACCACTCTTCGGGAGAATACAGCTCCGATTTCTTAACTCCAG
AGTTTGTCAAGTTTAGCATGGACCTCACCAACACTGAAATTACTGCCACCACTTCTCTCCCCAG
CTTCAGTACCTTTATGGACAACTACAGCACAGGCTACGACGTCAAGCCACCTTGCTTGTACCAA
ATGCCCCTGTCCGGACAGCAGTCCTCCATTAAGGTAGAAGACATTCAGATGCACAACTACCAGC
AACACAGCCACCTGCCCCCTCAGTCCGAGGAGATGATGCCACACAGCGGGTCGGTTTACTACAA
GCCCTCTTCGCCCCCGACACCCAGCACCCCGGGCTTCCAGGTGCAGCATAGCCCGATGTGGGAC
GATCCGGGCTCCCTTCACAACTTCCACCAGAACTACGTGGCCACTACGCATATGATCGAGCAGA
GGAAGACACCTGTCTCCCGCCTTTCACTCTTCTCCTTTAAGCAGTCGCCCCCGGGCACTCCTGT
GTCTAGCTGCCAGATGCGCTTTGACGGGCCTCTGCACGTCCCCATGAACCCGGAGCCCGCGGGC
AGCCACCACGTAGTGGATGGGCAGACCTTCGCCGTGCCCAATCCCATTCGCAAGCCGGCATCCA
TGGGCTTCCCGGGCCTGCAGATCGGCCACGCGTCGCAGTTGCTTGACACGCAGGTGCCCTCGCC
GCCGTCCCGGGGCTCTCCCTCCAATGAGGGTCTGTGCGCTGTTTGCGGTGACAACGCGGCCTGT
CAGCATTACGGTGTTCGCACTTGTGAGGGCTGCAAAGGTTTCTTTAAGCGCACGGTGCAAAAAA
ACGCGAAATATGTGTGTTTAGCAAATAAAAATTGCCCAGTGGATAAGCGCCGCCGAAATCGTTG
TCAGTACTGTCGGTTTCAGAAGTGCCTGGCTGTTGGGATGGTTAAAGAAGTGGTTCGCACGGAC
AGTTTAAAAGGCCGGAGAGGTCGTCTACCCTCAAAACCGAAGAGCCCACAGGATCCCTCTCCCC
CCTCACCTCCGGTGAGTCTGATCAGTGCCCTCGTCAGAGCCCACGTCGACTCCAATCCGGCAAT
GACCAGCCTGGACTATTCCAGGTTCCAGGCAAACCCTGACTATCAGATGAGTGGAGATGATACT
CAACATATCCAGCAGTTCTACGATCTCCTGACTGGCTCTATGGAGATCATCAGAGGGTGGGCAG
AGAAGATTCCTGGCTTTGCTGACCTGCCCAAAGCCGATCAGGACCTGCTTTTTGAATCAGCTTT
CTTAGAATTATTTGTTCTACGCTTAGCATACAGAATATGAACATCGACATTTCTGCCTTCTCCT
GCATTGCTGCCCTGGCTATGGTCACAGAGAGACACGGGCTCAAGGAACCCAAGAGAGTGGAAGA
GCTACAAAACAAAATTGTAAATTGTCTTAAAGACCATGTGACTTTCAATAATGGGGGATTGAAC
CGACCCAACTACCTGTCCAAACTGTTGGGGAAGCTCCCAGAACTTCGCACCCTTTGCACACAGG
GGCTCCAGCGCATTTTCTACCTGAAATTGGAAGACTTGGTACCACCACCAGCAATAATTGACAA
ACTTTTCCTGGACACCTTACCTTTCTAAGACTTTCTCCCATGCACGTCAAAGAACTGGAAAGAA
AAAAAAAATCCAGAGGGGGCTGGTCAAGATGGGTAGAGAGCTGGCTGAAGTGTCCGGTTCATGT
CTCCCTTCTGTAGACCCCTAGCCCTCACCCCTAAAGTAAACAAACAAACAAGCAAACAAACAAA
CACAAATTAAAAACTGTTGCTATTTCCTAACCTGCAGGCAGAACGTGAAAGGGCATTTTGGCTC
CGGGGCATCCTGGATTTAGAAAACGGACAACATACACAGTACAGTGGTATAAACTTTTTTATTA
TCAGTTCAAAATCAGTTTATTGTTCAGAAGGAAGATTGCAAATGTATGATGGGAAATGTTTGGC
CATGCTTGCTTGTTGCAGTTAAGACAAATGTAAGGCAAATGTAACACACACACACACACACACA
CACACACACACACACACACACCTCTTAATGGGACCCTCATATTTTGCCCTTTAACAAGACTTCA
AAGTTTTCTGCTGTAAAGAAAGCTGTAATATATAGTAAAACTAAATGTTGCGTGGGTGGCATGA
ATTGAAGGCAGAGGCTTGTAAATTTTATCCAATGCAGTTTGGCTTTTTAAATTATTTTGTGCCT
ATTTATGAATAAATATTACAAATTCTAAAAAGTAAGTGTGTTTGCAAAAAAATAAAAAAAGAAA
ATAACTCCATAAAAAGGGAACAAGCATGTGACTCTAGGTTGAAGATGTTATAGGCACTTGCTAC
TTCAGTAATGTCTATATTATATAAATAGTATTTCAGACACTATGTAGTCTGCTAGATTTTATAA
AGATTGGTAGTTATCTGAGCTTCAACATTTTCTCAATTGTATAATAGGTGGGCACAAGTATCAA
TACATTGGAAAATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGTCCAACATTCCTTGTT
TGTAAGTGTTGTATGTACCGTTGATGTTGATAAAAGAAAGTTTATATCTTGATTATTTTGTTGT
CTAAAGCTAATCAAAACTTGCATGCAACAGCTTTTGACTGTTTCCAGAGTGCTTATAATATACA
TAACTCCCTGGAAATTACTGAGCACTTTGAATTTTTTTTGTTTTTTTTTATGTCTAAAATTGTC
AGTTAATATATTATTTTATGTTTGAGTAAGAATTTTAATATTGCCATATTCTGTAGTATTTTCT
TTGTATATTTCTAGTATGGCACATGAGATGAGTCACTGCCTTTTTTTCTATGGTGTACGACAGT
TAGAGATGCTGATTTTTTTTTCTGATAAATTCTTTCTTTAAGAAAGACAATTTTAATGTTTACA
ACAATAAACCACGTAAATGAACA

hide sequence

Protein Sequences


Protein RefSeqs	NP_062201	(Get FASTA)	NCBI Sequence Viewer
	XP_006234263	(Get FASTA)	NCBI Sequence Viewer
	XP_017447486	(Get FASTA)	NCBI Sequence Viewer
	XP_038961665	(Get FASTA)	NCBI Sequence Viewer
	XP_038961666	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAA42058	(Get FASTA)	NCBI Sequence Viewer
	AAB46395	(Get FASTA)	NCBI Sequence Viewer
	AAC52143	(Get FASTA)	NCBI Sequence Viewer
	AAC53315	(Get FASTA)	NCBI Sequence Viewer
	AAZ76383	(Get FASTA)	NCBI Sequence Viewer
	AAZ76384	(Get FASTA)	NCBI Sequence Viewer
	AAZ76385	(Get FASTA)	NCBI Sequence Viewer
	AAZ76386	(Get FASTA)	NCBI Sequence Viewer
	AAZ76387	(Get FASTA)	NCBI Sequence Viewer
	AAZ76388	(Get FASTA)	NCBI Sequence Viewer
	EDM00414	(Get FASTA)	NCBI Sequence Viewer
	Q07917	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_062201 ⟸ NM_019328

- UniProtKB:

O35865 (UniProtKB/Swiss-Prot), Q07917 (UniProtKB/Swiss-Prot), A0A0G2JSV4 (UniProtKB/TrEMBL), Q3LZI5 (UniProtKB/TrEMBL), A6JF46 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MPCVQAQYGSSPQGASPASQSYSYHSSGEYSSDFLTPEFVKFSMDLTNTEITATTSLPSFSTFM
DNYSTGYDVKPPCLYQMPLSGQQSSIKVEDIQMHNYQQHSHLPPQSEEMMPHSGSVYYKPSSPP
TPSTPGFQVQHSPMWDDPGSLHNFHQNYVATTHMIEQRKTPVSRLSLFSFKQSPPGTPVSSCQM
RFDGPLHVPMNPEPAGSHHVVDGQTFAVPNPIRKPASMGFPGLQIGHASQLLDTQVPSPPSRGS
PSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRF
QKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQDPSPPSPPVSLISALVRAHVDSNPAMTSLDY
SRFQANPDYQMSGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFV
LRLAYRSNPVEGKLIFCNGVVLHRLQCVRGFGEWIDSIVEFSSNLQNMNIDISAFSCIAALAMV
TERHGLKEPKRVEELQNKIVNCLKDHVTFNNGGLNRPNYLSKLLGKLPELRTLCTQGLQRIFYL
KLEDLVPPPAIIDKLFLDTLPF

hide sequence

RefSeq Acc Id:	XP_006234263 ⟸ XM_006234201
- Peptide Label:	isoform X1
- UniProtKB:	O35865 (UniProtKB/Swiss-Prot), Q07917 (UniProtKB/Swiss-Prot), A0A0G2JSV4 (UniProtKB/TrEMBL), A6JF46 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPCVQAQYGSSPQGASPASQSYSYHSSGEYSSDFLTPEFVKFSMDLTNTEITATTSLPSFSTFM DNYSTGYDVKPPCLYQMPLSGQQSSIKVEDIQMHNYQQHSHLPPQSEEMMPHSGSVYYKPSSPP TPSTPGFQVQHSPMWDDPGSLHNFHQNYVATTHMIEQRKTPVSRLSLFSFKQSPPGTPVSSCQM RFDGPLHVPMNPEPAGSHHVVDGQTFAVPNPIRKPASMGFPGLQIGHASQLLDTQVPSPPSRGS PSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRF QKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQDPSPPSPPVSLISALVRAHVDSNPAMTSLDY SRFQANPDYQMSGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFV LRLAYRSNPVEGKLIFCNGVVLHRLQCVRGFGEWIDSIVEFSSNLQNMNIDISAFSCIAALAMV TERHGLKEPKRVEELQNKIVNCLKDHVTFNNGGLNRPNYLSKLLGKLPELRTLCTQGLQRIFYL KLEDLVPPPAIIDKLFLDTLPF hide sequence

RefSeq Acc Id:	XP_017447486 ⟸ XM_017591997
- Peptide Label:	isoform X1
- UniProtKB:	O35865 (UniProtKB/Swiss-Prot), Q07917 (UniProtKB/Swiss-Prot), A0A0G2JSV4 (UniProtKB/TrEMBL), A6JF46 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPCVQAQYGSSPQGASPASQSYSYHSSGEYSSDFLTPEFVKFSMDLTNTEITATTSLPSFSTFM DNYSTGYDVKPPCLYQMPLSGQQSSIKVEDIQMHNYQQHSHLPPQSEEMMPHSGSVYYKPSSPP TPSTPGFQVQHSPMWDDPGSLHNFHQNYVATTHMIEQRKTPVSRLSLFSFKQSPPGTPVSSCQM RFDGPLHVPMNPEPAGSHHVVDGQTFAVPNPIRKPASMGFPGLQIGHASQLLDTQVPSPPSRGS PSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRF QKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQDPSPPSPPVSLISALVRAHVDSNPAMTSLDY SRFQANPDYQMSGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFV LRLAYRSNPVEGKLIFCNGVVLHRLQCVRGFGEWIDSIVEFSSNLQNMNIDISAFSCIAALAMV TERHGLKEPKRVEELQNKIVNCLKDHVTFNNGGLNRPNYLSKLLGKLPELRTLCTQGLQRIFYL KLEDLVPPPAIIDKLFLDTLPF hide sequence

RefSeq Acc Id:

ENSRNOP00000043812 ⟸ ENSRNOT00000041394

RefSeq Acc Id:

ENSRNOP00000072142 ⟸ ENSRNOT00000078001

RefSeq Acc Id:	XP_038961666 ⟸ XM_039105738
- Peptide Label:	isoform X2
- UniProtKB:	Q07917 (UniProtKB/Swiss-Prot), O35865 (UniProtKB/Swiss-Prot), Q3LZI5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038961665 ⟸ XM_039105737
- Peptide Label:	isoform X1
- UniProtKB:	Q07917 (UniProtKB/Swiss-Prot), O35865 (UniProtKB/Swiss-Prot), A6JF46 (UniProtKB/TrEMBL)

Protein Domains

NR LBD Nuclear receptor

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q07917-F1-model_v2	AlphaFold	Q07917	1-598	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:3202	AgrOrtholog
BioCyc Gene	G2FUF-49671	BioCyc
Ensembl Genes	ENSRNOG00000005600	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSRNOP00000043812	ENTREZGENE
	ENSRNOP00000043812.3	UniProtKB/TrEMBL
	ENSRNOP00000072142	ENTREZGENE
	ENSRNOP00000072142.1	UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000041394	ENTREZGENE
	ENSRNOT00000041394.4	UniProtKB/TrEMBL
	ENSRNOT00000078001	ENTREZGENE
	ENSRNOT00000078001.2	UniProtKB/TrEMBL
Gene3D-CATH	1.10.565.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	3.30.50.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	NHR-like_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Nuc_orph_rcpt	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Nucl_hrmn_rcpt_lig-bd	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Nuclear_hrmn_rcpt	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	NURR_rcpt	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Znf_hrmn_rcpt	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Znf_NHR/GATA	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:54278	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene	54278	ENTREZGENE
PANTHER	NUCLEAR HORMONE RECEPTOR	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	NUCLEAR RECEPTOR SUBFAMILY 4 GROUP A MEMBER 2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Hormone_recep	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	zf-C4	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Nr4a2	PhenoGen
PRINTS	NUCLEARECPTR	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	NURRNUCRCPTR	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	STRDHORMONER	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	STROIDFINGER	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	NR_LBD	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	NUCLEAR_REC_DBD_1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	NUCLEAR_REC_DBD_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	HOLI	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ZnF_C4	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	Glucocorticoid receptor-like (DNA-binding domain)	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SSF48508	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
TIGR	TC233109
UniProt	A0A0G2JSV4	ENTREZGENE, UniProtKB/TrEMBL
	A6JF46	ENTREZGENE, UniProtKB/TrEMBL
	NR4A2_RAT	UniProtKB/Swiss-Prot
	O35865	ENTREZGENE
	Q07917	ENTREZGENE
	Q3LZI4_RAT	UniProtKB/TrEMBL
	Q3LZI5	ENTREZGENE, UniProtKB/TrEMBL
	Q3LZI7_RAT	UniProtKB/TrEMBL
	Q3LZI8_RAT	UniProtKB/TrEMBL
	Q3LZI9_RAT	UniProtKB/TrEMBL
UniProt Secondary	O35865	UniProtKB/Swiss-Prot
	Q3LZI6	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2002-06-10	Nr4a2	nuclear receptor subfamily 4, group A, member 2			Name updated	70584	APPROVED

RGD Curation Notes

Note Type	Note	Reference
gene_physical_interaction	heterodimerizes with retinoic X receptor (RXR)and binds direct repeat response elements	727393

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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