Ube2v1l2 (ubiquitin conjugating enzyme E2 V1 like 2) - Rat Genome Database

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Gene: Ube2v1l2 (ubiquitin conjugating enzyme E2 V1 like 2) Rattus norvegicus
Analyze
Symbol: Ube2v1l2
Name: ubiquitin conjugating enzyme E2 V1 like 2
RGD ID: 2323508
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC100359732; mCG20085-like; Ube2v1l1; ubiquitin conjugating enzyme E2 V1 like 1; ubiquitin-conjugating enzyme E2 variant 1-like
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81547,309,441 - 47,310,019 (+)NCBIGRCr8GRCr8GRCr8
mRatBN7.21543,134,058 - 43,134,595 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.01549,764,053 - 49,764,744 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01553,493,801 - 53,494,267 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41548,476,793 - 48,486,404 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1542,759,821 - 42,760,514 (+)NCBICelera
Cytogenetic Map15p11NCBI
JBrowse:




References

Genomics

Variants

.
Variants in Ube2v1l2
1 total Variants

QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1641913Colcr2Colorectal carcinoma resistance QTL 26.570.0197intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor number (CMO:0002076)15231575947315759Rat
1300144Rf23Renal function QTL 233.61renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)1544806773104695021Rat
738017Hcas7Hepatocarcinoma susceptibility QTL 72.91liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)15231575953331089Rat
152025253Hrtrt24Heart rate QTL 243.82heart pumping trait (VT:2000009)153185580392671517Rat
10054130Srcrt8Stress Responsive Cort QTL 82.180.0085blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)152852773273527732Rat
1582227Gluco30Glucose level QTL 303.60.0003blood glucose amount (VT:0000188)absolute change in blood glucose level area under curve (CMO:0002034)154367724488677244Rat
1582228Epfw3Epididymal fat weight QTL 34.10.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)154367724488677244Rat
1578646Bmd18Bone mineral density QTL 185.2femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)1525285835104695021Rat
2324620Coatc3Coat color QTL 3coat/hair pigmentation trait (VT:0010463)pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)152233635152597086Rat
1578647Bmd17Bone mineral density QTL 174femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)1525285835104695021Rat
61424Scl1Serum cholesterol level QTL 17.70.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)151915576287086765Rat
10401805Kidm51Kidney mass QTL 51kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)15278592347785923Rat
1598828Glom14Glomerulus QTL 142.5kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)154046315285463152Rat
2317750Glom26Glomerulus QTL 264.3urine protein amount (VT:0005160)urine protein level (CMO:0000591)151492659471614418Rat
631550Bw7Body weight QTL 73.6body mass (VT:0001259)body weight (CMO:0000012)152233635167336351Rat
1582242Gluco28Glucose level QTL 283.30.0008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)154367724488677244Rat
2306968Anxrr23Anxiety related response QTL 234.83reflex trait (VT:0001961)amplitude of the acoustic startle response (CMO:0001520)154480677352597086Rat
1578660Bss19Bone structure and strength QTL 194.3femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)1525285835104695021Rat
1582244Bw79Body weight QTL 7940.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)154367724488677244Rat
7411725Strs7Sensitivity to stroke QTL 73.8cerebrum integrity trait (VT:0010549)percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)154446544756583797Rat
1582214Stl21Serum triglyceride level QTL 213.10.022blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)154367724488677244Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
1 1 4 1 1 2 6

Sequence


RefSeq Acc Id: XM_039094077   ⟹   XP_038950005
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81547,309,441 - 47,310,019 (+)NCBI
mRatBN7.21543,134,058 - 43,134,595 (+)NCBI
Protein Sequences
Protein RefSeqs XP_038950005 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_038950005   ⟸   XM_039094077


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-13280 BioCyc
NCBI Gene 100359732 ENTREZGENE
PhenoGen Ube2v1l2 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-10-17 Ube2v1l2  ubiquitin conjugating enzyme E2 V1 like 2  Ube2v1l1  ubiquitin conjugating enzyme E2 V1 like 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2023-09-19 Ube2v1l1  ubiquitin conjugating enzyme E2 V1 like 1  LOC100359732  mCG20085-like  Symbol and Name Changed 1299863 APPROVED
2010-05-06 LOC100359732  mCG20085-like      Symbol and Name status set to provisional 70820 PROVISIONAL