Rxfp4 (relaxin family peptide/INSL5 receptor 4) - Rat Genome Database

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Gene: Rxfp4 (relaxin family peptide/INSL5 receptor 4) Rattus norvegicus
Analyze
Symbol: Rxfp4
Name: relaxin family peptide/INSL5 receptor 4
RGD ID: 2322332
Description: Predicted to act upstream of or within positive regulation of feeding behavior. Orthologous to human RXFP4 (relaxin family peptide/INSL5 receptor 4); INTERACTS WITH benzo[a]pyrene (ortholog); bis(2-ethylhexyl) phthalate (ortholog); chlorpyrifos (ortholog).
Type: pseudo
RefSeq Status: INFERRED
Previously known as: hypothetical LOC100360321; LOC100360321; LOC102549653; relaxin-3 receptor 2-like; relaxin/insulin like family peptide receptor 4; relaxin/insulin-like family peptide receptor 4, pseudogene 1; Rxfp4-ps1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82176,421,332 - 176,422,486 (-)NCBIGRCr8
mRatBN7.22174,123,510 - 174,124,664 (-)NCBImRatBN7.2mRatBN7.2
UTH_Rnor_WKY_Bbb_1.02173,892,170 - 173,893,324 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02188,026,531 - 188,027,685 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02207,428,265 - 207,431,695 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42180,780,814 - 180,781,968 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera2168,067,829 - 168,068,983 (-)NCBICelera
Cytogenetic Map2q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References
Additional References at PubMed
PMID:25028498  


Genomics

Comparative Map Data
Rxfp4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82176,421,332 - 176,422,486 (-)NCBIGRCr8
mRatBN7.22174,123,510 - 174,124,664 (-)NCBImRatBN7.2mRatBN7.2
UTH_Rnor_WKY_Bbb_1.02173,892,170 - 173,893,324 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02188,026,531 - 188,027,685 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02207,428,265 - 207,431,695 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42180,780,814 - 180,781,968 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera2168,067,829 - 168,068,983 (-)NCBICelera
Cytogenetic Map2q34NCBI
RXFP4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381155,941,638 - 155,943,087 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1155,941,638 - 155,943,087 (+)EnsemblGRCh38hg38GRCh38
GRCh371155,911,429 - 155,912,878 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361154,178,104 - 154,179,249 (+)NCBINCBI36Build 36hg18NCBI36
Build 341152,724,573 - 152,725,698NCBI
Celera1128,984,365 - 128,985,510 (+)NCBICelera
Cytogenetic Map1q22NCBI
HuRef1127,272,361 - 127,273,506 (+)NCBIHuRef
CHM1_11157,307,273 - 157,308,418 (+)NCBICHM1_1
T2T-CHM13v2.01155,079,771 - 155,081,220 (+)NCBIT2T-CHM13v2.0
Rxfp4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39388,559,081 - 88,560,489 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl388,559,205 - 88,560,449 (-)EnsemblGRCm39 Ensembl
GRCm38388,651,898 - 88,653,142 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl388,651,898 - 88,653,142 (-)EnsemblGRCm38mm10GRCm38
MGSCv37388,455,820 - 88,457,064 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36388,737,825 - 88,739,069 (-)NCBIMGSCv36mm8
Celera388,692,014 - 88,693,258 (-)NCBICelera
Cytogenetic Map3F1NCBI
cM Map338.92NCBI
Rxfp4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049555452,143,832 - 2,145,939 (+)NCBIChiLan1.0ChiLan1.0
RXFP4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2193,909,021 - 93,920,143 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1193,640,167 - 93,651,884 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01131,275,631 - 131,279,593 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11135,106,869 - 135,108,093 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1135,106,884 - 135,108,008 (+)Ensemblpanpan1.1panPan2
Rxfp4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505826,176,806 - 26,181,612 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365805,208,222 - 5,209,346 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365805,208,001 - 5,209,711 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RXFP4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl494,082,826 - 94,088,224 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1494,083,974 - 94,085,095 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24102,826,985 - 102,828,106 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RXFP4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1207,930,719 - 7,933,422 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660387,232,682 - 7,234,402 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rxfp4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248851,309,418 - 1,312,004 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Rxfp4
7 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1358356Srcrt1Stress Responsive Cort QTL13.66blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)2161699179222436696Rat
1578648Bss11Bone structure and strength QTL 114.7femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)2114837527211674221Rat
1331734Bp204Blood pressure QTL 2043.61192arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2168358098223265385Rat
1298074Bp164Blood pressure QTL 1640.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242804607202447032Rat
6907363Bp357Blood pressure QTL 3574.10.002arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)2129540907174540907Rat
1354648Bp239Blood pressure QTL 2390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)266118463226797303Rat
1354649Kidm17Kidney mass QTL 172.9kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)281754530227146641Rat
1298076Bp166Blood pressure QTL 1660.0009arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2136445150202447032Rat
10755499Bp389Blood pressure QTL 3892.61arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)218960362228801039Rat
152025245Scl81Serum cholesterol level QTL 813.49blood cholesterol amount (VT:0000180)2122609194206936711Rat
70162Bp63Blood pressure QTL 635.64arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)2169745596214745596Rat
1554319Bmd2Bone mineral density QTL 213.40.0001lumbar vertebra area (VT:0010570)lumbar vertebra cross-sectional area (CMO:0001689)2114837675212549332Rat
12879836Kidm61Kidney mass QTL 610.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)2152413072185122374Rat
1581569Uae32Urinary albumin excretion QTL 320.0001urine protein amount (VT:0005160)urine albumin excretion rate (CMO:0000757)278665619219826953Rat
10043136Iddm54Insulin dependent diabetes mellitus QTL 543.40.0001blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)2143657411190602963Rat
12879837Am2Aortic mass QTL 20.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)2152413072185122374Rat
1302793Bw16Body weight QTL 1650.0001body mass (VT:0001259)body weight (CMO:0000012)2157142209202446871Rat
12879838Cm86Cardiac mass QTL 860.002heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)2152413072185122374Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)243154682202446871Rat
12879839Cm85Cardiac mass QTL 850.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)2152413072185122374Rat
61469Bp16Blood pressure QTL 165.64arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)2169745596214745596Rat
70175BpQTLCluster3Blood pressure QTL cluster 34.128arterial blood pressure trait (VT:2000000)absolute change in systolic blood pressure (CMO:0000607)2135552573202446871Rat
1549833Bp257Blood pressure QTL 2570.003arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2168354880185122374Rat
1358900Bw48Body weight QTL 484.88body mass (VT:0001259)body weight (CMO:0000012)2157142078211086598Rat
61473Bp19Blood pressure QTL 196.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2172710921175950118Rat
12879845Cm89Cardiac mass QTL 890.008heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)2152413072175950118Rat
1359030Bp277Blood pressure QTL 277arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)2114837527185876470Rat
12879846Cm90Cardiac mass QTL 900.011heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)2152413072175950118Rat
12879847Am4Aortic mass QTL 40.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)2152413072175950118Rat
1331760Bp206Blood pressure QTL 2063.62454arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)256043031202447032Rat
12879840Bw179Body weight QTL 1790.005body mass (VT:0001259)body weight (CMO:0000012)2152413072185122374Rat
1581502Esta3Estrogen-induced thymic atrophy QTL 3thymus mass (VT:0004954)thymus wet weight (CMO:0000855)2136916935189599348Rat
1359032Hrtrt18Heart rate QTL 18heart pumping trait (VT:2000009)heart rate (CMO:0000002)2157142078192625452Rat
2301966Bp322Blood pressure QTL 3223.58arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2150540301202447032Rat
1298080Bp163Blood pressure QTL 1630.02arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)266118275202447032Rat
8662832Vetf7Vascular elastic tissue fragility QTL 73.5aorta elastin amount (VT:0003905)aorta wall extracellular elastin dry weight to aorta wall dry weight ratio (CMO:0002002)281689826221035911Rat
1298085Bp165Blood pressure QTL 1650.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242804607202447032Rat
1641891Alcrsp17Alcohol response QTL 17response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)2149559561249053267Rat
1359022Ppulsi1Prepulse inhibition QTL 13.63prepulse inhibition trait (VT:0003088)acoustic startle response measurement (CMO:0001519)2136916935213594495Rat
724534Uae6Urinary albumin excretion QTL 610urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)278665619249053267Rat
61374Edpm2Estrogen-dependent pituitary mass QTL 24.420.86pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)276539322202447032Rat
8662843Vetf9Vascular elastic tissue fragility QTL 92.05thoracic aorta molecular composition trait (VT:0010568)aorta wall extracellular elastin dry weight to aorta wall extracellular collagen weight ratio (CMO:0002003)2157142078226277316Rat
631501Bp101Blood pressure QTL 1012.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2150341684202446871Rat
2301415Cm67Cardiac mass QTL 670.003heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)2152413072175950118Rat
2307174Activ3Activity QTL 34.830.000058locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)2168594495213594495Rat
1331794Bp202Blood pressure QTL 2023.66819arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2141194931223265385Rat
71113Cari2Carrageenan-induced inflammation QTL 22.70.009hypodermis integrity trait (VT:0010550)inflammatory exudate volume (CMO:0001429)2141596551202447032Rat
1331805Cm29Cardiac mass QTL 293.50746heart mass (VT:0007028)heart wet weight (CMO:0000069)2141194931223265385Rat
11565180Kidm56Kidney mass QTL 560.003kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)2152413072175950118Rat
1598805Memor8Memory QTL 83exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)2150341585189039377Rat
634308Sach6Saccharin preference QTL 64.9taste sensitivity trait (VT:0001986)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)2112456140212696837Rat
11565181Bw176Body weight QTL 1760.002body mass (VT:0001259)body weight (CMO:0000012)2152413072175950118Rat
1358917Cm42Cardiac mass QTL 422.82heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423203928301Rat
724568Uae13Urinary albumin excretion QTL 134.4urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)2143157029210020885Rat
1358913Cm41Cardiac mass QTL 412.73heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423203928301Rat
1300165Rf9Renal function QTL 93.28kidney glomerulus integrity trait (VT:0010546)index of glomerular damage (CMO:0001135)2133914684202447032Rat
61401Niddm2Non-insulin dependent diabetes mellitus QTL 24.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)2144599348189599348Rat
631507Bp105Blood pressure QTL 1050.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2112456140212696837Rat
1641925Alcrsp2Alcohol response QTL 2response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)2149559561221167075Rat
1354609Niddm62Non-insulin dependent diabetes mellitus QTL 624.720.000006insulin secretion trait (VT:0003564)plasma insulin level (CMO:0000342)2150540301202447032Rat
1598833Bp295Blood pressure QTL 2953.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2147798556192798556Rat
1354622Kidm16Kidney mass QTL 163kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)281754530222436696Rat
631266Bp132Blood pressure QTL 1320.0005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)246123260202447032Rat
631522Bp74Blood pressure QTL 740.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2172710921184114403Rat
7488927Bp365Blood pressure QTL 3650.008arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2162765032207765032Rat
1598838Bp290Blood pressure QTL 2901.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2166539266211539266Rat
7488925Bp364Blood pressure QTL 3640.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2160564068205564068Rat
2293843Kiddil6Kidney dilation QTL 63.1kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)242804607182042367Rat
2306901Bp337Blood pressure QTL 3370.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2164073756227146641Rat
1354605Rf48Renal function QTL 482.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)274786664206665859Rat
6903312Bw112Body weight QTL 1123.20.0013body mass (VT:0001259)body weight (CMO:0000012)2143657569184114274Rat
7488904Bp363Blood pressure QTL 3630.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2172982062175950118Rat
1354601Slep1Serum leptin concentration QTL 15.39blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)243171017184114403Rat


Expression

RNA-SEQ Expression


Sequence



Additional Information

Database Acc Id Source(s)
AGR Gene RGD:2322332 AgrOrtholog
BioCyc Gene G2FUF-52470 BioCyc
NCBI Gene Rxfp4 ENTREZGENE
PhenoGen Rxfp4 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-03-01 Rxfp4  relaxin family peptide/INSL5 receptor 4  Rxfp4  relaxin/insulin like family peptide receptor 4  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2018-01-26 Rxfp4  relaxin/insulin like family peptide receptor 4  Rxfp4-ps1  relaxin/insulin-like family peptide receptor 4, pseudogene 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2014-04-10 LOC100360321  hypothetical LOC100360321  LOC102549653  relaxin-3 receptor 2-like  Data merged from RGD:7631652 737654 APPROVED
2014-04-10 Rxfp4-ps1  relaxin/insulin-like family peptide receptor 4, pseudogene 1  LOC100360321  relaxin-3 receptor 2-like  Name and Symbol changed 629549 APPROVED
2014-04-10 LOC100360321  relaxin-3 receptor 2-like  LOC100360321  hypothetical LOC100360321  Name and Type changed (type changed from [null] to [allele]) 629549 APPROVED
2013-12-18 LOC102549653  relaxin-3 receptor 2-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2010-05-06 LOC100360321  hypothetical LOC100360321      Symbol and Name status set to provisional 70820 PROVISIONAL