Uqcr10-ps1 (ubiquinol-cytochrome c reductase, complex III subunit X, pseudogene 1) - Rat Genome Database

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Gene: Uqcr10-ps1 (ubiquinol-cytochrome c reductase, complex III subunit X, pseudogene 1) Rattus norvegicus
Analyze
No known orthologs.
Symbol: Uqcr10-ps1
Name: ubiquinol-cytochrome c reductase, complex III subunit X, pseudogene 1
RGD ID: 2320734
Description: Predicted to be involved in mitochondrial electron transport, ubiquinol to cytochrome c. Predicted to be located in mitochondrial inner membrane. Predicted to be part of respiratory chain complex III. Orthologous to human UQCR10 (ubiquinol-cytochrome c reductase, complex III subunit X); INTERACTS WITH 4,4'-sulfonyldiphenol; bisphenol A; bisphenol F.
Type: pseudo (Ensembl: protein-coding)
RefSeq Status: INFERRED
Previously known as: cytochrome b-c1 complex subunit 9; cytochrome b-c1 complex subunit 9-like; LOC100361126; RGD2320734; ubiquinol-cytochrome c reductase complex 7.2kDa protein; ubiquinol-cytochrome c reductase, complex III subunit X; Uqcr10
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Related Functional Gene: Uqcr10  
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81584,866,743 - 84,867,175 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1584,866,953 - 84,867,147 (-)EnsemblGRCr8
mRatBN7.21578,452,001 - 78,452,433 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1578,452,211 - 78,452,405 (-)EnsemblmRatBN7.2
Rnor_6.01586,123,181 - 86,123,498 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01589,888,373 - 89,888,781 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41585,592,150 - 85,592,344 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1577,646,127 - 77,646,465 (-)NCBICelera
Cytogenetic Map15q21NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions

Genomics

Variants

.
Variants in Uqcr10-ps1
3 total Variants

QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1549844Bss7Bone structure and strength QTL 76.4femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1575788062101769107Rat
2300326Plaw1Placental weight QTL 1150.005placenta mass (VT:0004257)placenta wet weight (CMO:0002088)1568327165100062518Rat
70155Gcs1Gastric cancer susceptibility QTL13.8stomach morphology trait (VT:0000470)stomach tumor susceptibility score (CMO:0002043)1576306099101769107Rat
1582227Gluco30Glucose level QTL 303.60.0003blood glucose amount (VT:0000188)absolute change in blood glucose level area under curve (CMO:0002034)152803066582262678Rat
1582228Epfw3Epididymal fat weight QTL 34.10.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)152803066582262678Rat
1578646Bmd18Bone mineral density QTL 185.2femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)152280624098288169Rat
1578647Bmd17Bone mineral density QTL 174femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)152280624098288169Rat
631516Gluco31Glucose level QTL 317blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)155559608995018120Rat
1331724Bp223Blood pressure QTL 2233.53715arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)157369051895018228Rat
2317055Aia10Adjuvant induced arthritis QTL 103.41joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)1575788062101769107Rat
1582214Stl21Serum triglyceride level QTL 213.10.022blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)152803066582262678Rat
731177Uae26Urinary albumin excretion QTL 262.40.025urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1567588667101769107Rat
1576315Schws6Schwannoma susceptibility QTL 60.0069nervous system integrity trait (VT:0010566)post-insult time of death (CMO:0002005)155380615298806152Rat
1300144Rf23Renal function QTL 233.61renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)154063126898288169Rat
61477Aia4Adjuvant induced arthritis QTL 43joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)155559608991365858Rat
70182BpQTLcluster12Blood pressure QTL cluster 123.53arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)157369065795018120Rat
152025253Hrtrt24Heart rate QTL 243.82heart pumping trait (VT:2000009)152788577486257085Rat
1581555Eae19Experimental allergic encephalomyelitis QTL 194.7nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)157630609990088744Rat
631655Bp126Blood pressure QTL 1264arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1558156477101769107Rat
61424Scl1Serum cholesterol level QTL 17.70.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)151672552880672115Rat
1598828Glom14Glomerulus QTL 142.5kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)153405413979054139Rat
1641889Colcr6Colorectal carcinoma resistance QTL 62.90.0126intestine integrity trait (VT:0010554)benign colorectal tumor surface area measurement (CMO:0001799)157369051899794247Rat
1582242Gluco28Glucose level QTL 283.30.0008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)152803066582262678Rat
1582244Bw79Body weight QTL 7940.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)152803066582262678Rat
1578660Bss19Bone structure and strength QTL 194.3femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)152280624098288169Rat


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSRNOT00000012614   ⟹   ENSRNOP00000077029
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1584,866,953 - 84,867,147 (-)Ensembl
mRatBN7.2 Ensembl1578,452,211 - 78,452,405 (-)Ensembl
Rnor_6.0 Ensembl1586,123,284 - 86,123,475 (-)Ensembl
RefSeq Acc Id: XM_039093972   ⟹   XP_038949900
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21578,448,397 - 78,452,589 (-)NCBI
Protein Sequences
Ensembl Protein ENSRNOP00000077029.1
RefSeq Acc Id: XP_038949900   ⟸   XM_039093972
Ensembl Acc Id: ENSRNOP00000077029   ⟸   ENSRNOT00000012614

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:2320734 AgrOrtholog
BioCyc Gene G2FUF-12752 BioCyc
BioCyc Pathway PWY-3781 [aerobic respiration I (cytochrome c)] BioCyc
  PWY-7279 [aerobic respiration II (cytochrome c) (yeast)] BioCyc
BioCyc Pathway Image PWY-3781 BioCyc
  PWY-7279 BioCyc
Ensembl Genes ENSRNOG00000009521 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000012614.5 UniProtKB/TrEMBL
Gene3D-CATH 1.20.5.260 UniProtKB/TrEMBL
InterPro QCR9 UniProtKB/TrEMBL
  QCR9_sf UniProtKB/TrEMBL
NCBI Gene 100361126 ENTREZGENE
PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT 9 UniProtKB/TrEMBL
  PTHR12980 UniProtKB/TrEMBL
Pfam UCR_UQCRX_QCR9 UniProtKB/TrEMBL
PhenoGen Uqcr10-ps1 PhenoGen
RatGTEx ENSRNOG00000009521 RatGTEx
Superfamily-SCOP SSF81514 UniProtKB/TrEMBL
UniProt A0A8I5ZK76_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-07-08 Uqcr10-ps1  ubiquinol-cytochrome c reductase, complex III subunit X, pseudogene 1  Uqcr10-ps1  ubiquinol-cytochrome c reductase, complex III subunit X, pseudogene 1  Type changed (type changed from [protein-coding] to [pseudo]) 629549 APPROVED
2022-07-08 Uqcr10-ps1  ubiquinol-cytochrome c reductase, complex III subunit X, pseudogene 1  RGD2320734  cytochrome b-c1 complex subunit 9-like  Name and Symbol changed 629549 APPROVED
2013-10-17 RGD2320734  cytochrome b-c1 complex subunit 9-like  Uqcr10  ubiquinol-cytochrome c reductase, complex III subunit X  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2012-08-10 Uqcr10  ubiquinol-cytochrome c reductase, complex III subunit X  LOC100361126  ubiquinol-cytochrome c reductase complex 7.2kDa protein  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2010-05-05 LOC100361126  ubiquinol-cytochrome c reductase complex 7.2kDa protein      Symbol and Name status set to provisional 70820 PROVISIONAL