Ppapdc1a<sup>Tn(sb-T2/Bart3)2.207Mcwi</sup> (phosphatidic acid phosphatase type 2 domain containing 1A; transposon insertion 2.207, Medical College of Wisconsin)

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Gene: Ppapdc1a^{Tn(sb-T2/Bart3)2.207Mcwi} (phosphatidic acid phosphatase type 2 domain containing 1A; transposon insertion 2.207, Medical College of Wisconsin) Rattus norvegicus

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Symbol:

Ppapdc1a^{Tn(sb-T2/Bart3)2.207Mcwi}

Name:

phosphatidic acid phosphatase type 2 domain containing 1A; transposon insertion 2.207, Medical College of Wisconsin

RGD ID:

2299105

Description:

this mutation consists of an insertion of a Sleeping Beauty transposable element gene trap construct into the 6th intron of the Ppapdc1a gene

Type:

allele of Plpp4

Previously known as:

Ppapdc1a^[Tn(sb-T2/Bart3)2.207Mcwi]; Ppapdc1aTn(sb-T2/Bart3)2.207Mcwi

Is Marker For:

Strains: F344-Ppapdc1a^{Tn(sb-T2/Bart3)2.207Mcwi}

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Cytogenetic Map	1		RGD

Annotation Click to see Annotation Detail View

References

References - curated

#	Reference Title	Reference Citation
1.	Generation of rat mutants using a coat color-tagged Sleeping Beauty transposon system.	Lu B, etal., Mamm Genome. 2007 May;18(5):338-46. Epub 2007 Jun 8.
2.	PhysGen Strains	PhysGen strains

Genomics

Related Rat Strains

The following Strains have been annotated to Ppapdc1a^{Tn(sb-T2/Bart3)2.207Mcwi}

F344-Ppapdc1a^{Tn(sb-T2/Bart3)2.207Mcwi}

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_219376	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Additional Information

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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