Chsy1<sup>Tn(sb-T2/Bart3)2.165Mcwi</sup> (carbohydrate (chondroitin) synthase 1 ; transposon insertion 2.165, Medical College of Wisconsin)

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Gene: Chsy1^{Tn(sb-T2/Bart3)2.165Mcwi} (carbohydrate (chondroitin) synthase 1 ; transposon insertion 2.165, Medical College of Wisconsin) Rattus norvegicus

Analyze

Symbol:

Chsy1^{Tn(sb-T2/Bart3)2.165Mcwi}

Name:

carbohydrate (chondroitin) synthase 1 ; transposon insertion 2.165, Medical College of Wisconsin

RGD ID:

2290123

Description:

This mutation consists of an insertion of a Sleeping Beauty transposable element gene trap construct into the 2^nd intron of the Chsy1.

Type:

allele of Chsy1

Previously known as:

Chsy1^[Tn(sb-T2/Bart3)2.165Mcwi]; Chsy1Tn(sb-T2/Bart3)2.165Mcwi

Is Marker For:

Strains: F344-Chsy1^{Tn(sb-T2/Bart3)2.165Mcwi}

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Cytogenetic Map	1		RGD

Annotation Click to see Annotation Detail View

References

References - curated

#	Reference Title	Reference Citation
1.	Generation of rat mutants using a coat color-tagged Sleeping Beauty transposon system.	Lu B, etal., Mamm Genome. 2007 May;18(5):338-46. Epub 2007 Jun 8.
2.	PhysGen Strains	PhysGen strains

Genomics

Related Rat Strains

The following Strains have been annotated to Chsy1^{Tn(sb-T2/Bart3)2.165Mcwi}

F344-Chsy1^{Tn(sb-T2/Bart3)2.165Mcwi}

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001106268	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Additional Information

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Chsy1^{Tn(sb-T2/Bart3)2.165Mcwi}	carbohydrate (chondroitin) synthase 1 ; transposon insertion 2.165, Medical College of Wisconsin	Chsy1_predicted^{Tn(sb-T2/Bart3)2.165Mcwi}	carbohydrate (chondroitin) synthase 1 (predicted); transposon insertion 2.165, Medical College of Wisconsin	'predicted' is removed	2292626	APPROVED

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Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

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MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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