LOC681893<sup>Tn(sb-T2/Bart3)2.159Mcwi</sup> (similar to SET protein (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I) (Liver regeneration-related protein LRRGR00002); transposon insertion 2.159, Medical College of Wisconsin)

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Gene: LOC681893^{Tn(sb-T2/Bart3)2.159Mcwi} (similar to SET protein (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I) (Liver regeneration-related protein LRRGR00002); transposon insertion 2.159, Medical College of Wisconsin) Rattus norvegicus

Analyze

Symbol:

LOC681893^{Tn(sb-T2/Bart3)2.159Mcwi}

Name:

similar to SET protein (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I) (Liver regeneration-related protein LRRGR00002); transposon insertion 2.159, Medical College of Wisconsin

RGD ID:

2290119

Description:

this mutation consists of an insertion of a Sleeping Beauty transposable element gene trap construct into the LOC681893 gene

Type:

allele of LOC681893

Previously known as:

LOC681893^[Tn(sb-T2/Bart3)2.159Mcwi]; LOC681893Tn(sb-T2/Bart3)2.159Mcwi

Is Marker For:

Strains: F344-LOC681893^{Tn(sb-T2/Bart3)2.159Mcwi}

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Cytogenetic Map	3		RGD

Annotation Click to see Annotation Detail View

References

References - curated

#	Reference Title	Reference Citation
1.	Generation of rat mutants using a coat color-tagged Sleeping Beauty transposon system.	Lu B, etal., Mamm Genome. 2007 May;18(5):338-46. Epub 2007 Jun 8.
2.	PhysGen Strains	PhysGen strains

Genomics

Related Rat Strains

The following Strains have been annotated to LOC681893^{Tn(sb-T2/Bart3)2.159Mcwi}

F344-LOC681893^{Tn(sb-T2/Bart3)2.159Mcwi}

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


GenBank Nucleotide	AY539901	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Additional Information

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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