Uck2 (uridine-cytidine kinase 2) - Rat Genome Database

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Gene: Uck2 (uridine-cytidine kinase 2) Heterocephalus glaber
Analyze
Symbol: Uck2
Name: uridine-cytidine kinase 2
RGD ID: 18920244
Description: ENCODES a protein that exhibits cytidine kinase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to oxygen levels (ortholog); feeding behavior (ortholog); response to axon injury (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); Experimental Diabetes Mellitus (ortholog); gastrointestinal stromal tumor (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248264,163,798 - 4,229,640 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248264,163,830 - 4,243,048 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Uck2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248264,163,798 - 4,229,640 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248264,163,830 - 4,243,048 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
UCK2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381165,827,614 - 165,911,618 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1165,827,614 - 165,911,618 (+)EnsemblGRCh38hg38GRCh38
GRCh371165,796,851 - 165,880,855 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361164,063,514 - 164,143,967 (+)NCBINCBI36Build 36hg18NCBI36
Celera1138,902,284 - 138,982,715 (+)NCBICelera
Cytogenetic Map1q24.1NCBI
HuRef1137,044,441 - 137,128,457 (+)NCBIHuRef
CHM1_11167,219,021 - 167,303,066 (+)NCBICHM1_1
T2T-CHM13v2.01165,173,785 - 165,257,744 (+)NCBIT2T-CHM13v2.0
Uck2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391167,050,464 - 167,112,657 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1167,050,452 - 167,112,889 (-)EnsemblGRCm39 Ensembl
GRCm381167,222,895 - 167,285,933 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1167,222,883 - 167,285,320 (-)EnsemblGRCm38mm10GRCm38
MGSCv371169,156,214 - 169,215,258 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361169,062,758 - 169,121,802 (-)NCBIMGSCv36mm8
Celera1169,643,034 - 169,702,477 (-)NCBICelera
Cytogenetic Map1H2.3NCBI
cM Map174.61NCBI
Uck2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81381,913,732 - 81,971,036 (-)NCBIGRCr8
mRatBN7.21379,380,807 - 79,438,121 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1379,383,846 - 79,438,352 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1382,013,671 - 82,068,184 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01383,321,316 - 83,375,604 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01380,558,961 - 80,613,449 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01385,376,716 - 85,443,976 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1385,376,716 - 85,443,976 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.013101,428,775 - 101,429,259 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01390,035,485 - 90,087,109 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41382,892,893 - 82,949,575 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11382,907,443 - 82,914,725 (-)NCBI
Celera1379,089,479 - 79,143,648 (-)NCBICelera
Cytogenetic Map13q24NCBI
Uck2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546210,815,389 - 10,886,227 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495546210,815,496 - 10,925,364 (-)NCBIChiLan1.0ChiLan1.0
UCK2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2183,854,536 - 83,940,003 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1183,522,848 - 83,608,323 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01141,259,057 - 141,343,122 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11145,110,561 - 145,131,894 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1145,110,434 - 145,131,894 (+)Ensemblpanpan1.1panPan2
UCK2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13817,475,789 - 17,555,926 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3817,479,558 - 17,579,675 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3817,535,557 - 17,602,054 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03817,534,582 - 17,601,221 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3817,531,134 - 17,634,890 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13817,532,294 - 17,598,816 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03817,883,407 - 17,949,905 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03818,177,313 - 18,243,863 (-)NCBIUU_Cfam_GSD_1.0
Uck2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344101,658,728 - 101,713,313 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648119,505,459 - 19,560,083 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648119,505,477 - 19,560,035 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
UCK2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl484,838,802 - 84,919,236 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1484,838,793 - 84,919,231 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
UCK2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12562,974,515 - 63,059,436 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2562,974,257 - 63,059,414 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605564,729,768 - 64,814,746 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSHGLT00000008394   ⟹   ENSHGLP00000008305
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046248264,163,798 - 4,229,640 (+)Ensembl
RefSeq Acc Id: XM_004865189   ⟹   XP_004865246
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248264,163,835 - 4,229,504 (+)NCBI
RefSeq Acc Id: XM_013065766   ⟹   XP_012921220
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248264,163,832 - 4,229,504 (+)NCBI
RefSeq Acc Id: XM_021244674   ⟹   XP_021100333
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248264,175,778 - 4,229,504 (+)NCBI
RefSeq Acc Id: XM_021244675   ⟹   XP_021100334
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248264,163,830 - 4,243,048 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004865246 (Get FASTA)   NCBI Sequence Viewer  
  XP_012921220 (Get FASTA)   NCBI Sequence Viewer  
  XP_021100333 (Get FASTA)   NCBI Sequence Viewer  
  XP_021100334 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000008305
RefSeq Acc Id: XP_021100334   ⟸   XM_021244675
- Peptide Label: isoform X4
- UniProtKB: A0AAX6RW08 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_012921220   ⟸   XM_013065766
- Peptide Label: isoform X2
- UniProtKB: A0AAX6QIT5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004865246   ⟸   XM_004865189
- Peptide Label: isoform X1
- UniProtKB: G5AQ34 (UniProtKB/TrEMBL),   A0AAX6Q4E9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021100333   ⟸   XM_021244674
- Peptide Label: isoform X3
- UniProtKB: G5AQ34 (UniProtKB/TrEMBL),   A0AAX6RWZ5 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSHGLP00000008305   ⟸   ENSHGLT00000008394


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000006010 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000008394 ENTREZGENE
Gene3D-CATH P-loop containing nucleotide triphosphate hydrolases UniProtKB/TrEMBL
InterPro P-loop_NTPase UniProtKB/TrEMBL
  PRK/URK UniProtKB/TrEMBL
  Uridine_kinase-like UniProtKB/TrEMBL
NCBI Gene Uck2 ENTREZGENE
PANTHER URIDINE KINASE UniProtKB/TrEMBL
Pfam PRK UniProtKB/TrEMBL
PRINTS URIDINKINASE UniProtKB/TrEMBL
Superfamily-SCOP P-loop containing nucleoside triphosphate hydrolases UniProtKB/TrEMBL
UniProt A0AAX6Q4E9 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6QIT5 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6RW08 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6RWZ5 ENTREZGENE, UniProtKB/TrEMBL
  G5AQ34 ENTREZGENE, UniProtKB/TrEMBL