Sox30 (Heterocephalus glaber - naked mole-rat) |
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SOX30 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 5 | 157,625,679 - 157,671,480 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 5 | 157,625,679 - 157,671,480 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 5 | 157,052,687 - 157,098,488 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 5 | 156,985,265 - 157,012,006 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 5 | 153,079,301 - 153,106,027 (-) | NCBI | | Celera | | | Cytogenetic Map | 5 | q33.3 | NCBI | | | | | HuRef | 5 | 152,141,308 - 152,168,043 (-) | NCBI | | HuRef | | | CHM1_1 | 5 | 156,485,413 - 156,512,148 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 5 | 158,144,714 - 158,190,505 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Sox30 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 11 | 45,869,873 - 45,908,824 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 11 | 45,871,137 - 45,908,821 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 11 | 45,979,069 - 46,017,992 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 11 | 45,980,310 - 46,017,994 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 11 | 45,793,812 - 45,831,494 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 11 | 45,823,733 - 45,861,417 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 11 | 50,569,188 - 50,580,989 (+) | NCBI | | Celera | | | Cytogenetic Map | 11 | B1.1 | NCBI | | | | | cM Map | 11 | 27.49 | NCBI | | | | |
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Sox30 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 10 | 30,918,707 - 30,948,415 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 10 | 30,417,499 - 30,446,441 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 10 | 30,418,473 - 30,446,453 (+) | Ensembl | | mRatBN7.2 Ensembl | | | Rnor_6.0 | 10 | 31,074,251 - 31,102,211 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 10 | 31,074,251 - 31,102,169 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 10 | 30,895,749 - 30,923,086 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 10 | 31,116,928 - 31,144,665 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 10 | 29,871,335 - 29,900,535 (+) | NCBI | | Celera | | | Cytogenetic Map | 10 | q21 | NCBI | | | | |
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Sox30 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955408 | 11,790,079 - 11,828,962 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955408 | 11,790,145 - 11,830,426 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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SOX30 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 4 | 152,814,686 - 152,862,324 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 5 | 150,954,233 - 151,001,871 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 5 | 153,022,109 - 153,067,734 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 5 | 159,642,895 - 159,688,473 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 5 | 159,640,126 - 159,737,776 (-) | Ensembl | panpan1.1 | | panPan2 | |
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SOX30 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 4 | 52,587,163 - 52,615,945 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 4 | 52,587,355 - 52,615,945 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 4 | 52,478,213 - 52,507,510 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 4 | 53,021,730 - 53,051,044 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 4 | 53,022,045 - 53,051,044 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 4 | 52,849,219 - 52,878,517 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 4 | 52,955,552 - 52,984,862 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 4 | 53,473,267 - 53,502,568 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Sox30 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024407213 | 107,051,963 - 107,087,980 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936515 | 5,458,393 - 5,537,946 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936515 | 5,501,315 - 5,537,946 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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SOX30 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 16 | 65,642,223 - 65,678,047 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 16 | 65,642,107 - 65,677,693 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 16 | 71,494,089 - 71,532,303 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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SOX30 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 23 | 60,013,384 - 60,038,682 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 23 | 60,014,046 - 60,037,997 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666034 | 17,546,899 - 17,616,449 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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