Dnajc19 (DnaJ heat shock protein family (Hsp40) member C19) - Rat Genome Database

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Gene: Dnajc19 (DnaJ heat shock protein family (Hsp40) member C19) Heterocephalus glaber
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Symbol: Dnajc19
Name: DnaJ heat shock protein family (Hsp40) member C19
RGD ID: 18903800
Description: ENCODES a protein that exhibits ATPase activator activity (inferred); INVOLVED IN genitalia development (ortholog); regulation of cardiolipin metabolic process (ortholog); visual perception (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH 3-methylglutaconic aciduria (ortholog); 3-methylglutaconic aciduria type 3 (ortholog); 3-methylglutaconic aciduria type 5 (ortholog); FOUND IN inner mitochondrial membrane protein complex (ortholog); matrix side of mitochondrial inner membrane (ortholog); protein-containing complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Mitochondrial import inner membrane translocase subunit TIM14
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473058,730,413 - 58,755,688 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473058,746,824 - 58,755,544 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:21993625   PMID:30032202  


Genomics

Comparative Map Data
Dnajc19
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473058,730,413 - 58,755,688 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473058,746,824 - 58,755,544 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
DNAJC19
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383180,983,709 - 180,989,838 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3180,983,697 - 180,989,774 (-)EnsemblGRCh38hg38GRCh38
GRCh373180,701,497 - 180,707,626 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363182,184,197 - 182,190,224 (-)NCBINCBI36Build 36hg18NCBI36
Celera3179,133,934 - 179,140,000 (-)NCBICelera
Cytogenetic Map3q26.33NCBI
HuRef3178,105,493 - 178,111,557 (-)NCBIHuRef
CHM1_13180,664,781 - 180,670,846 (-)NCBICHM1_1
T2T-CHM13v2.03183,785,491 - 183,791,620 (-)NCBIT2T-CHM13v2.0
Dnajc19
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39334,111,429 - 34,135,503 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl334,110,169 - 34,135,470 (-)EnsemblGRCm39 Ensembl
GRCm38334,057,280 - 34,081,354 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl334,056,020 - 34,081,321 (-)EnsemblGRCm38mm10GRCm38
MGSCv37333,956,680 - 33,980,248 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36334,249,307 - 34,272,875 (-)NCBIMGSCv36mm8
Celera333,953,924 - 33,977,453 (-)NCBICelera
Cytogenetic Map3A3NCBI
cM Map316.43NCBI
Dnajc19
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82118,851,497 - 118,875,813 (-)NCBIGRCr8
mRatBN7.22116,923,272 - 116,945,312 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2116,923,272 - 116,945,264 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2123,512,875 - 123,534,874 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02121,625,542 - 121,647,543 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02116,253,290 - 116,275,296 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02120,503,093 - 120,531,782 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2120,504,130 - 120,531,782 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02140,149,956 - 140,174,575 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera2111,962,564 - 111,984,600 (-)NCBICelera
Cytogenetic Map2q24NCBI
Dnajc19
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554209,953,045 - 9,978,789 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554209,974,466 - 9,978,789 (-)NCBIChiLan1.0ChiLan1.0
DNAJC19
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22178,855,625 - 178,861,633 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13178,860,342 - 178,866,350 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03178,019,161 - 178,025,272 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13186,191,128 - 186,197,156 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3186,191,128 - 186,195,666 (-)Ensemblpanpan1.1panPan2
DNAJC19
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13414,199,507 - 14,204,736 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3414,199,675 - 14,204,687 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3418,281,677 - 18,286,739 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03414,101,051 - 14,106,123 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3414,098,572 - 14,106,041 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13414,146,876 - 14,151,940 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03414,129,181 - 14,134,245 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03414,373,244 - 14,378,316 (-)NCBIUU_Cfam_GSD_1.0
Dnajc19
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602110,872,579 - 110,877,731 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365662,343,013 - 2,368,213 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365662,342,995 - 2,348,345 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DNAJC19
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13118,902,666 - 118,913,270 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113118,907,299 - 118,913,270 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213128,168,301 - 128,255,013 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DNAJC19
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1158,408,615 - 8,426,838 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl158,408,400 - 8,429,990 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606317,240,292 - 17,259,188 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSHGLT00000020292   ⟹   ENSHGLP00000020092
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462473058,730,413 - 58,754,470 (-)Ensembl
Ensembl Acc Id: ENSHGLT00000020293   ⟹   ENSHGLP00000020093
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462473058,746,824 - 58,755,688 (-)Ensembl
Ensembl Acc Id: ENSHGLT00000020294   ⟹   ENSHGLP00000020094
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462473058,751,426 - 58,754,535 (-)Ensembl
RefSeq Acc Id: XM_013071784   ⟹   XP_012927238
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473058,750,781 - 58,755,544 (-)NCBI
RefSeq Acc Id: XM_021254773   ⟹   XP_021110432
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473058,750,762 - 58,755,310 (-)NCBI
RefSeq Acc Id: XM_021254777   ⟹   XP_021110436
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473058,746,824 - 58,755,313 (-)NCBI
Protein Sequences
Protein RefSeqs XP_012927238 (Get FASTA)   NCBI Sequence Viewer  
  XP_021110432 (Get FASTA)   NCBI Sequence Viewer  
  XP_021110436 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB17160 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000020093
GenBank Protein JAO01236 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_021110436   ⟸   XM_021254777
- Peptide Label: isoform X1
- UniProtKB: G5C6J9 (UniProtKB/TrEMBL),   A0AAX6SNC5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021110432   ⟸   XM_021254773
- Peptide Label: isoform X1
- UniProtKB: G5C6J9 (UniProtKB/TrEMBL),   A0AAX6SNC5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_012927238   ⟸   XM_013071784
- Peptide Label: isoform X2
- UniProtKB: A0A0P6K6F2 (UniProtKB/TrEMBL),   G5C6J9 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSHGLP00000020092   ⟸   ENSHGLT00000020292
Ensembl Acc Id: ENSHGLP00000020093   ⟸   ENSHGLT00000020293
Ensembl Acc Id: ENSHGLP00000020094   ⟸   ENSHGLT00000020294


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000014387 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000020293 ENTREZGENE
Gene3D-CATH 1.10.287.110 UniProtKB/TrEMBL
InterPro DnaJ_domain UniProtKB/TrEMBL
  J_dom_sf UniProtKB/TrEMBL
KEGG Report hgl:101722454 UniProtKB/TrEMBL
NCBI Gene Dnajc19 ENTREZGENE
PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM14 UniProtKB/TrEMBL
  UNCHARACTERIZED UniProtKB/TrEMBL
Pfam DnaJ UniProtKB/TrEMBL
PROSITE DNAJ_2 UniProtKB/TrEMBL
SMART DnaJ UniProtKB/TrEMBL
Superfamily-SCOP SSF46565 UniProtKB/TrEMBL
UniProt A0A0P6K6F2 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6SNC5 ENTREZGENE, UniProtKB/TrEMBL
  G5C6J9 ENTREZGENE, UniProtKB/TrEMBL