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Gene: STRA6 (signaling receptor and transporter of retinol STRA6) Chlorocebus sabaeus

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Symbol:

STRA6

Name:

signaling receptor and transporter of retinol STRA6

RGD ID:

18772922

Description:

ENCODES a protein that exhibits retinal binding (inferred); retinol binding (inferred); retinol transmembrane transporter activity (inferred); INVOLVED IN establishment of localization in cell (ortholog); positive regulation of receptor signaling pathway via JAK-STAT (ortholog); response to retinoic acid (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; ASSOCIATED WITH Anophthalmia (ortholog); Bardet-Biedl syndrome (ortholog); Bloom syndrome (ortholog); FOUND IN plasma membrane (inferred); protein-containing complex (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

receptor for retinol uptake STRA6; stimulated by retinoic acid 6; stimulated by retinoic acid gene 6 protein homolog

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	26	9,275,317 - 9,311,302 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	26	9,278,303 - 9,311,475 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	132,311,962 - 132,346,794 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Anophthalmia (ISO)

Bardet-Biedl syndrome (ISO)

Bloom syndrome (ISO)

Brugada syndrome 8 (ISO)

Cardiovascular Abnormalities (ISO)

colorectal adenocarcinoma (ISO)

colorectal cancer (ISO)

congenital heart disease (ISO)

Craniofacial Abnormalities (ISO)

diabetic retinopathy (ISO)

Diaphragmatic Hernia (ISO)

exfoliation syndrome (ISO)

Experimental Diabetes Mellitus (ISO)

genetic disease (ISO)

intellectual disability (ISO)

Isolated Microphthalmia with Coloboma (ISO)

lung disease (ISO)

microphthalmia (ISO)

PAPA syndrome (ISO)

persistent fetal circulation syndrome (ISO)

schizophrenia (ISO)

syndromic microphthalmia 5 (ISO)

syndromic microphthalmia 9 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

adrenal gland development (IEA)

alveolar primary septum development (IEA)

artery morphogenesis (IEA)

blood vessel development (IEA)

camera-type eye development (IEA)

cognition (IEA)

developmental growth (IEA)

diaphragm development (IEA)

digestive tract morphogenesis (IEA)

ductus arteriosus closure (IEA)

ear development (IEA)

embryonic camera-type eye formation (IEA)

embryonic digestive tract development (IEA)

establishment of localization in cell (ISO)

eyelid development in camera-type eye (IEA)

face morphogenesis (IEA)

feeding behavior (IEA)

female genitalia development (IEA)

head development (IEA)

head morphogenesis (IEA)

heart development (IEA)

kidney development (IEA)

learning (IEA)

lung alveolus development (IEA)

lung development (IEA)

lung vasculature development (IEA)

neuromuscular process (IEA)

nose morphogenesis (IEA)

paramesonephric duct development (IEA)

positive regulation of behavior (IEA)

positive regulation of receptor signaling pathway via JAK-STAT (ISO)

pulmonary artery morphogenesis (IEA)

pulmonary valve morphogenesis (IEA)

response to retinoic acid (ISO)

retinol transport (IEA,ISO)

smooth muscle tissue development (IEA)

uterus morphogenesis (IEA)

ventricular septum development (IEA)

vitamin A import into cell (IEA)

vocal learning (IEA)

Cellular Component

plasma membrane (IEA)

protein-containing complex (IEA)

Molecular Function

protein binding (ISO)

retinal binding (IEA)

retinol binding (IEA)

retinol transmembrane transporter activity (IEA)

signaling receptor activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

retinoic acid metabolic pathway (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

STRA6
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	26	9,275,317 - 9,311,302 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	26	9,278,303 - 9,311,475 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	132,311,962 - 132,346,794 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

STRA6
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	15	74,179,466 - 74,212,259 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	15	74,179,466 - 74,212,267 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	15	74,471,807 - 74,502,046 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	15	72,258,860 - 72,282,245 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	15	72,258,862 - 72,282,245	NCBI
Celera	15	51,418,988 - 51,448,552 (-)	NCBI		Celera
Cytogenetic Map	15	q24.1	NCBI
HuRef	15	51,265,478 - 51,295,736 (-)	NCBI		HuRef
CHM1_1	15	74,590,002 - 74,620,238 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	15	72,045,386 - 72,078,184 (-)	NCBI		T2T-CHM13v2.0

Stra6
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	57,971,076 - 58,061,287 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	57,971,071 - 58,061,279 (+)	Ensembl		GRCm39 Ensembl
GRCm38	9	58,063,793 - 58,154,004 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	58,063,788 - 58,153,996 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	57,976,895 - 58,001,804 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	57,927,486 - 57,952,090 (+)	NCBI		MGSCv36	mm8
Celera	9	55,363,368 - 55,388,212 (+)	NCBI		Celera
Cytogenetic Map	9	B	NCBI
cM Map	9	31.63	NCBI

Stra6
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	67,444,757 - 67,464,719 (+)	NCBI		GRCr8
mRatBN7.2	8	58,548,899 - 58,568,861 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	58,549,736 - 58,568,860 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	64,079,448 - 64,099,415 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	62,357,008 - 62,376,974 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	60,221,574 - 60,241,541 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	62,925,364 - 62,944,438 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	62,925,357 - 62,944,437 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	62,701,454 - 62,720,528 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	61,920,772 - 61,939,791 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	8	61,939,822 - 61,958,845 (+)	NCBI
Celera	8	58,013,586 - 58,032,719 (+)	NCBI		Celera
Cytogenetic Map	8	q24	NCBI

Stra6
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955450	3,580,662 - 3,602,600 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955450	3,579,081 - 3,602,538 (+)	NCBI	ChiLan1.0	ChiLan1.0

STRA6
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	16	63,403,177 - 63,433,441 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	15	67,566,763 - 67,597,027 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	15	53,117,891 - 53,150,790 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	15	72,740,868 - 72,773,802 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	15	72,741,482 - 72,770,876 (-)	Ensembl	panpan1.1		panPan2

STRA6
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	30	37,331,834 - 37,359,449 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	30	37,331,832 - 37,353,529 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	30	37,267,455 - 37,295,072 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	30	37,538,888 - 37,566,524 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	30	37,538,924 - 37,560,014 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	30	37,491,016 - 37,518,679 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	30	37,516,933 - 37,544,523 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	30	37,772,499 - 37,800,122 (-)	NCBI		UU_Cfam_GSD_1.0

Stra6
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	115,376,111 - 115,490,544 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936471	33,224,859 - 33,245,030 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936471	33,224,174 - 33,245,076 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

STRA6
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	59,318,011 - 59,347,266 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	59,317,930 - 59,347,274 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	63,936,184 - 63,965,508 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Stra6
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624781	389,481 - 413,728 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624781	304,890 - 413,655 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in STRA6
1075 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
70	36	20	36	36	54	20

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_008015903	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008015905	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008015906	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008015907	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008015908	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008015909	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008015910	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008015911	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008015912	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000012237 ⟹ ENSCSAP00000010280

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	26	9,278,303 - 9,311,475 (+)	Ensembl

RefSeq Acc Id:

XM_008015903 ⟹ XP_008014094

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	26	9,287,939 - 9,311,302 (+)	NCBI
Vero_WHO_p1.0	NW_023666048	132,311,962 - 132,335,289 (-)	NCBI

Sequence:

show sequence

AGAGGGAAGGAAGGGGCGTCTCTCTAGGCAGCTCGGACTGGACAAGCCTTCTTTGAAAATGGTC
CTTTGAACAAACGCCTGCTGGTGGTTGGTCAGACAGACAGATGCGCCAGCAGGAGCCCCGGGGC
CCCAAGGGGACAGCTATCTCTGCGGGACCGGTGCGATGGGCGGGAAGGGAGGAGGGGACACGAG
AGGCCCTGTCCTCCTCCTGTGCCAGCTTGCTCAGGCCCTCGGTCCCAGACGGGCTTTTCCCAGA
GAGCTAAAAGAGGAGAAGGGCCGGAGAATGTCGTCCCAGCCAGCAGGGAACCAGACCTCCCCCG
GGGCCACAGAGGACTACTCCTACGGCAGCTGGTACATCGATGAGCCCCAGGGCGGCGAGGAGCT
CCAGCCAGAGGGGGAAGTGCCCTCCTGCCACACCAGCGTACCACCCGGCCTGTACCACGCCTGC
CTGGCCTCGCTGTCAATCCTTGTACTGCTGCTCCTGGCCGTGCTGGTGAGGCGCCGCCAGCTCT
GGCCTGATTGTGTGCGCGGCAGGCCCGGCCTGCCCAGCCCTGTGGATTTCTTGGCTGGGGACAG
GCCCCAGACAGTGCCTGCTGCTGTCTTCATGGTCCTCTTCAGCTCCCTGTGTTTGCTGCTCCCC
GACGAGGACCCATTGCCCTTCCTGACTCTCGCCTCAGCACCCAGCCAAGGGGCCTGGAAGATGC
TGGGACTGTTCTATTACGCTGCCCTCTACTACCCGCTGGCCGCCTGTGCCACAGCTGGCCACAG
AGCTGCACACTTGCTCGGCAGCACGCTGTCCTGGGCCCACCTTGGTGTCCAGGTCTGGCAGAGG
GCAGAGTGTCCCCAGGCACCCAAGATCTACAAGTACTATTCCCTGCTGGCCTCCCTGCCTCTCT
TGCTGGGCCTCGGATTCCTGAGCCTTTGGTACCCTGTGCAGCTGGCGAGAAGCTTCAGTCGTAG
GACAGGAGCAGGCTCCAAGGGGCTGCAGAGCAGCTACTCTGAGGAATATCTGAGGAACCTCCTT
TGCAGGAAGAAGCTGGGAAGCAGCTCCCACACCTCCAAGCATGGCTTCCTGTCCTGGGCCCGGG
TCTGCTTGAGACACTGCATCTACACTCCACAGCCAGGATTCCGTCTTCCGCTGAAGCTGGTGCT
TTCAGCCACACTGACAGGGACGGCCATTTACCAGGTGGCCCTGCTGCTGCTGGTGGGCGTGGTA
CCCACCATCCAGAAGGTGAGGGCGGGGGTCACCACGGATGTCTCCTATATGCTGGCCGGCTTTG
GGATCGTGCTCTCAGAGGACAAGCAGGAGGTGGTGGAGCTGGTGAAGCACCATCTGTGGGCTCT
GGAAGTGTGCTACATCTCAGCCTTGGTCTTGTCCTGCTTACTCACCTTCCTGGTCCTGATGCGC
TCACTGGTGACACACAGGACCAACCTTCGAGCTCTGTACCGAGGAGCTGCCCTGGACTTGAGTC
CCTTGCATCGGAGTCCCCACCCCTCCCGCCAAGCCATATTCTGTTGGATGAGCTTCAGTGCCTA
CCAGACAGCCTTTATCTGCCTTGGGCTCCTGGTGCAGCAAATCATCTTCTTCCTGGGAACCACG
GCCCTGGCCTTCCTGGTGCTCATGCCTGTGCTCCATGGCAGGAACCTCCTGCTCTTCCGTTCCC
TGGAGTCCTCGTGGCCCTTCTGGCTGACTTTGGCCCTGGCTGTGACCCTGCAGAACATGGCAGC
CCACTGGGTCTTCCTGGAGACTCATGATGGACACCCACAGCTGACCAACCGGCGAGTGCTCTAT
GCAGCCACCTTTCTTCTCTTTCCCCTCAATGTGCTGGTGGGTGCCATGGTGGCCACCTGGCGAG
TGCTCCTCTCTGCCCTCTACAATGCCATCCACCTTGGCCAGATGGACCTCAGCCTGCTGCCACC
GAGAGCCGCCACTCTCGACCCCGGCTACTACACATACCGAAACTTCTTGAAGATTGAGGTCAGC
CAGTCGCATCCAGCCATAACAGCCTTCTGCTTCCTGCTCCTGCAAGCGCGGAGCCTCCTACCCA
GGACCATGGTGGCCCCCAAGGACAGCCTCAGACCAGGGGAGGAAGACGAAGGGATGCAGCTGTT
ACAGACAAAGGACTCCATGGCCAAGGGAGCAAGGCCCAGGGCCAGCCGCTGCAGGGCTCGCTGG
GGTCTGGCCTACACGCTGCTGCACAACCCAACCCTGCAGGTCTTCCGCAAGACGGCCCTGTTGG
GTGCCAATGGTGCCCAGTCCTGAGGGCAGGGAAGGCCAGCCCACCTGCCCATCTGTGTTGAGGC
ACGTTCCTGCCTACCATCCTCCTCCCTCCCCGGCTCTCCCAGCATCACCCCAGCCATGCAGCCG
GCAGGTCCTCTGGATCACCATGGTTGGGTGGAGGTCTGTCTGCACTGGGAGCCTCAGGAGAGCT
CTGCTCCGCCCACTTGGCCATGGGAGAGCCAGCAGGGGTTTTGAAGAAAGAAACTGGCGGGTTA
GGGCCTTGGTCCAGGAGCCAGTCGAGCCAGGGCGGCCACATCCAGGCCTCTCCCTACCCTGGCT
CTGCCACCAGCCTTGAAGGGCCTCGATGAAGCCTTCTCTGGAACCACTCCAGTTCAGCTCCACC
TCAGCCTTGGCCTTCATGCTGTGGAAGCAGCCGAGGCACTTCCTCACCCCCTCAGCTCCACGGA
CCTCTCTGGGGAGTGGCTGGAAGGCTCCCAGGCTGCTGGCCTGAAGGGCAGCCCAAGTCACGAC
TCAGACCAGGTCCCACACCGAGCTGCCCACACTTGAGAGCCAGATATTTTTGTAGTTTTTATGC
CTTTGGCTATTATGAGAGAGGTTAGTGTGTTCCCTGCAATAAACTTGTTCCTGAGAAAC

hide sequence

RefSeq Acc Id:

XM_008015906 ⟹ XP_008014097

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	26	9,275,317 - 9,311,302 (+)	NCBI
Vero_WHO_p1.0	NW_023666048	132,311,962 - 132,346,794 (-)	NCBI

Sequence:

show sequence

TCCTATGGTACTTGTCTTTTCACAAGTGGCTTATTTCACTTAACATAATGTCCTGGGGATGGTT
CCCTTTTGCCCCAGGCCAGGTCTGCCTTTTCTCATCTCCCTACCCTTACTGGTGTGATTTCCAC
TGCCCAAACTGTCCAGCTCCACCCGATGCAGCCCTATTCATCCTGCAGACTGGCTAAAAGCCTC
CTCCCCTGTGACCCGGGTTAGTGACTCCTTCCTCCACCCCATTTTGCATTTTCCTCTCCTGTCT
CAAATGATGACTTGCCCACACAAGTCATCATTCAATGCCCTGAATGTTGTTTCAGGAATCATGT
TTGTGTGCCCAGGCTGGGTGAGGGATAGGTGCCTGGGAAATGGTTAAAGCATTATGGATGAATA
AATGAATGATTGCATGAATGAATAAATTGATGAAGAAATCGAACCCAGCTTCTACTTATGCAGA
AAGGAATAAGAGTTCTTTTGGCTATTTCATTTGGATTCCATCTGTGACAAGCAAAGACCATGTT
GGGCTTTTGAGTCAAACTTGGACTCAGAGTTGCAACCTGGGGCCTCAGTGGGCAAGCAGCCGGT
GAGGAGGGAGGGTGGCTGTGTTGGAGGGTAGGAGGCAGGACAGGAGGCAGAAACCCTGATGCTC
AGGCATCTCTGGGTCTGGCCTCAGTTCTATGTAGAAATCTAGAAACTTCAATGAATTTCAGCAA
GTCAGAGCTGGCTGGCATGCCCATTTTACAGATGGAGAAACTGATCCCAGGGCCACAGGGCAGC
ACCAGATCCCTCCTCCCTTCCCAGGTTCTCTCTACTCCCAGCTGCCTCCCTGATTCAGCCTCCC
ACAGTTTTCAAAAAGTTGAAACTCCAGATGAGACTGTCTCTGGGGGGCAGGGCCTGGTTCCCCA
GAGGGAGTCAAAAAGGAGTAGGGTATGTGGGCTGGGGTGAGGGGAGGAAGGCAGGAAGGGAGCA
GCCTTGGGAGGTGAACTTCCAAGCCACCTTCCAAAGTTCCAGCGTGAAAGACCTTAATGGGGCC
CTCCAGTCTTCTTTCTTCCCCAAAAGAATGGCCACTCAGAGGCAGCTGGCTTTGTTTGGAAGAG
CCAGGGCCTATAATTAGCCCACCCCAGAGGGCGCCCTTCCTGCTTCCCACAATGGCTCCTTTCA
ACCTCCCCTGCTGACACACCCCCACGGCCCCTGAGCGCTCTGAGACCCCTATCTTCAACGACCC
ACCTCCAACTCCCTCCCCACCCACACTTTACTTCCTTCCTCCAGGCAGAGCTGAATCCTGGCAA
GCAGGGAGTCTGTGAATTCTCTGGAGCCAAGGACCTGGGGCTGAGACTCATCCCCTTCCACAGG
TGCAGAATCCGAGGTGCAGAGAGAGCAGTTGCTTGGCTGCTCCACCAGGCTCTGAAGGCACAAA
CCCCTGAGACGGTGTCCAAGCCCAGGGCCCTGTAGACTGCGGATCCTGAGACCAGCACCACTCG
TCCTGCAGCACTGGGGACAGACAGAGCAGGAGGAGAAGGGCCGGAGAATGTCGTCCCAGCCAGC
AGGGAACCAGACCTCCCCCGGGGCCACAGAGGACTACTCCTACGGCAGCTGGTACATCGATGAG
CCCCAGGGCGGCGAGGAGCTCCAGCCAGAGGGGGAAGTGCCCTCCTGCCACACCAGCGTACCAC
CCGGCCTGTACCACGCCTGCCTGGCCTCGCTGTCAATCCTTGTACTGCTGCTCCTGGCCGTGCT
GGTGAGGCGCCGCCAGCTCTGGCCTGATTGTGTGCGCGGCAGGCCCGGCCTGCCCAGCCCTGTG
GATTTCTTGGCTGGGGACAGGCCCCAGACAGTGCCTGCTGCTGTCTTCATGGTCCTCTTCAGCT
CCCTGTGTTTGCTGCTCCCCGACGAGGACCCATTGCCCTTCCTGACTCTCGCCTCAGCACCCAG
CCAAGGGGCCTGGAAGATGCTGGGACTGTTCTATTACGCTGCCCTCTACTACCCGCTGGCCGCC
TGTGCCACAGCTGGCCACAGAGCTGCACACTTGCTCGGCAGCACGCTGTCCTGGGCCCACCTTG
GTGTCCAGGTCTGGCAGAGGGCAGAGTGTCCCCAGGCACCCAAGATCTACAAGTACTATTCCCT
GCTGGCCTCCCTGCCTCTCTTGCTGGGCCTCGGATTCCTGAGCCTTTGGTACCCTGTGCAGCTG
GCGAGAAGCTTCAGTCGTAGGACAGGAGCAGGCTCCAAGGGGCTGCAGAGCAGCTACTCTGAGG
AATATCTGAGGAACCTCCTTTGCAGGAAGAAGCTGGGAAGCAGCTCCCACACCTCCAAGCATGG
CTTCCTGTCCTGGGCCCGGGTCTGCTTGAGACACTGCATCTACACTCCACAGCCAGGATTCCGT
CTTCCGCTGAAGCTGGTGCTTTCAGCCACACTGACAGGGACGGCCATTTACCAGGTGGCCCTGC
TGCTGCTGGTGGGCGTGGTACCCACCATCCAGAAGGTGAGGGCGGGGGTCACCACGGATGTCTC
CTATATGCTGGCCGGCTTTGGGATCGTGCTCTCAGAGGACAAGCAGGAGGTGGTGGAGCTGGTG
AAGCACCATCTGTGGGCTCTGGAAGTGTGCTACATCTCAGCCTTGGTCTTGTCCTGCTTACTCA
CCTTCCTGGTCCTGATGCGCTCACTGGTGACACACAGGACCAACCTTCGAGCTCTGTACCGAGG
AGCTGCCCTGGACTTGAGTCCCTTGCATCGGAGTCCCCACCCCTCCCGCCAAGCCATATTCTGT
TGGATGAGCTTCAGTGCCTACCAGACAGCCTTTATCTGCCTTGGGCTCCTGGTGCAGCAAATCA
TCTTCTTCCTGGGAACCACGGCCCTGGCCTTCCTGGTGCTCATGCCTGTGCTCCATGGCAGGAA
CCTCCTGCTCTTCCGTTCCCTGGAGTCCTCGTGGCCCTTCTGGCTGACTTTGGCCCTGGCTGTG
ACCCTGCAGAACATGGCAGCCCACTGGGTCTTCCTGGAGACTCATGATGGACACCCACAGCTGA
CCAACCGGCGAGTGCTCTATGCAGCCACCTTTCTTCTCTTTCCCCTCAATGTGCTGGTGGGTGC
CATGGTGGCCACCTGGCGAGTGCTCCTCTCTGCCCTCTACAATGCCATCCACCTTGGCCAGATG
GACCTCAGCCTGCTGCCACCGAGAGCCGCCACTCTCGACCCCGGCTACTACACATACCGAAACT
TCTTGAAGATTGAGGTCAGCCAGTCGCATCCAGCCATAACAGCCTTCTGCTTCCTGCTCCTGCA
AGCGCGGAGCCTCCTACCCAGGACCATGGTGGCCCCCAAGGACAGCCTCAGACCAGGGGAGGAA
GACGAAGGGATGCAGCTGTTACAGACAAAGGACTCCATGGCCAAGGGAGCAAGGCCCAGGGCCA
GCCGCTGCAGGGCTCGCTGGGGTCTGGCCTACACGCTGCTGCACAACCCAACCCTGCAGGTCTT
CCGCAAGACGGCCCTGTTGGGTGCCAATGGTGCCCAGTCCTGAGGGCAGGGAAGGCCAGCCCAC
CTGCCCATCTGTGTTGAGGCACGTTCCTGCCTACCATCCTCCTCCCTCCCCGGCTCTCCCAGCA
TCACCCCAGCCATGCAGCCGGCAGGTCCTCTGGATCACCATGGTTGGGTGGAGGTCTGTCTGCA
CTGGGAGCCTCAGGAGAGCTCTGCTCCGCCCACTTGGCCATGGGAGAGCCAGCAGGGGTTTTGA
AGAAAGAAACTGGCGGGTTAGGGCCTTGGTCCAGGAGCCAGTCGAGCCAGGGCGGCCACATCCA
GGCCTCTCCCTACCCTGGCTCTGCCACCAGCCTTGAAGGGCCTCGATGAAGCCTTCTCTGGAAC
CACTCCAGTTCAGCTCCACCTCAGCCTTGGCCTTCATGCTGTGGAAGCAGCCGAGGCACTTCCT
CACCCCCTCAGCTCCACGGACCTCTCTGGGGAGTGGCTGGAAGGCTCCCAGGCTGCTGGCCTGA
AGGGCAGCCCAAGTCACGACTCAGACCAGGTCCCACACCGAGCTGCCCACACTTGAGAGCCAGA
TATTTTTGTAGTTTTTATGCCTTTGGCTATTATGAGAGAGGTTAGTGTGTTCCCTGCAATAAAC
TTGTTCCTGAGAAAC

hide sequence

RefSeq Acc Id:

XM_008015907 ⟹ XP_008014098

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	26	9,287,759 - 9,311,302 (+)	NCBI
Vero_WHO_p1.0	NW_023666048	132,311,962 - 132,335,481 (-)	NCBI

Sequence:

show sequence

CCCAAAGGGGCCAGAAAGGGGCAGGCTGAGGCTGGGGGAGGGGAAGGGAGCCCAGCTGGGAGGG
CCCAGGCAGGCAGTGCGGAGCTGGCTGTGGCCTGCCTACCCTTTCATCTCTGCAACTCCTTCCT
CCCTGGGCCTCCCTTCTGGAGGAGAAGGGCCGGAGAATGTCGTCCCAGCCAGCAGGGAACCAGA
CCTCCCCCGGGGCCACAGAGGACTACTCCTACGGCAGCTGGTACATCGATGAGCCCCAGGGCGG
CGAGGAGCTCCAGCCAGAGGGGGAAGTGCCCTCCTGCCACACCAGCGTACCACCCGGCCTGTAC
CACGCCTGCCTGGCCTCGCTGTCAATCCTTGTACTGCTGCTCCTGGCCGTGCTGGTGAGGCGCC
GCCAGCTCTGGCCTGATTGTGTGCGCGGCAGGCCCGGCCTGCCCAGCCCTGTGGATTTCTTGGC
TGGGGACAGGCCCCAGACAGTGCCTGCTGCTGTCTTCATGGTCCTCTTCAGCTCCCTGTGTTTG
CTGCTCCCCGACGAGGACCCATTGCCCTTCCTGACTCTCGCCTCAGCACCCAGCCAAGGGGCCT
GGAAGATGCTGGGACTGTTCTATTACGCTGCCCTCTACTACCCGCTGGCCGCCTGTGCCACAGC
TGGCCACAGAGCTGCACACTTGCTCGGCAGCACGCTGTCCTGGGCCCACCTTGGTGTCCAGGTC
TGGCAGAGGGCAGAGTGTCCCCAGGCACCCAAGATCTACAAGTACTATTCCCTGCTGGCCTCCC
TGCCTCTCTTGCTGGGCCTCGGATTCCTGAGCCTTTGGTACCCTGTGCAGCTGGCGAGAAGCTT
CAGTCGTAGGACAGGAGCAGGCTCCAAGGGGCTGCAGAGCAGCTACTCTGAGGAATATCTGAGG
AACCTCCTTTGCAGGAAGAAGCTGGGAAGCAGCTCCCACACCTCCAAGCATGGCTTCCTGTCCT
GGGCCCGGGTCTGCTTGAGACACTGCATCTACACTCCACAGCCAGGATTCCGTCTTCCGCTGAA
GCTGGTGCTTTCAGCCACACTGACAGGGACGGCCATTTACCAGGTGGCCCTGCTGCTGCTGGTG
GGCGTGGTACCCACCATCCAGAAGGTGAGGGCGGGGGTCACCACGGATGTCTCCTATATGCTGG
CCGGCTTTGGGATCGTGCTCTCAGAGGACAAGCAGGAGGTGGTGGAGCTGGTGAAGCACCATCT
GTGGGCTCTGGAAGTGTGCTACATCTCAGCCTTGGTCTTGTCCTGCTTACTCACCTTCCTGGTC
CTGATGCGCTCACTGGTGACACACAGGACCAACCTTCGAGCTCTGTACCGAGGAGCTGCCCTGG
ACTTGAGTCCCTTGCATCGGAGTCCCCACCCCTCCCGCCAAGCCATATTCTGTTGGATGAGCTT
CAGTGCCTACCAGACAGCCTTTATCTGCCTTGGGCTCCTGGTGCAGCAAATCATCTTCTTCCTG
GGAACCACGGCCCTGGCCTTCCTGGTGCTCATGCCTGTGCTCCATGGCAGGAACCTCCTGCTCT
TCCGTTCCCTGGAGTCCTCGTGGCCCTTCTGGCTGACTTTGGCCCTGGCTGTGACCCTGCAGAA
CATGGCAGCCCACTGGGTCTTCCTGGAGACTCATGATGGACACCCACAGCTGACCAACCGGCGA
GTGCTCTATGCAGCCACCTTTCTTCTCTTTCCCCTCAATGTGCTGGTGGGTGCCATGGTGGCCA
CCTGGCGAGTGCTCCTCTCTGCCCTCTACAATGCCATCCACCTTGGCCAGATGGACCTCAGCCT
GCTGCCACCGAGAGCCGCCACTCTCGACCCCGGCTACTACACATACCGAAACTTCTTGAAGATT
GAGGTCAGCCAGTCGCATCCAGCCATAACAGCCTTCTGCTTCCTGCTCCTGCAAGCGCGGAGCC
TCCTACCCAGGACCATGGTGGCCCCCAAGGACAGCCTCAGACCAGGGGAGGAAGACGAAGGGAT
GCAGCTGTTACAGACAAAGGACTCCATGGCCAAGGGAGCAAGGCCCAGGGCCAGCCGCTGCAGG
GCTCGCTGGGGTCTGGCCTACACGCTGCTGCACAACCCAACCCTGCAGGTCTTCCGCAAGACGG
CCCTGTTGGGTGCCAATGGTGCCCAGTCCTGAGGGCAGGGAAGGCCAGCCCACCTGCCCATCTG
TGTTGAGGCACGTTCCTGCCTACCATCCTCCTCCCTCCCCGGCTCTCCCAGCATCACCCCAGCC
ATGCAGCCGGCAGGTCCTCTGGATCACCATGGTTGGGTGGAGGTCTGTCTGCACTGGGAGCCTC
AGGAGAGCTCTGCTCCGCCCACTTGGCCATGGGAGAGCCAGCAGGGGTTTTGAAGAAAGAAACT
GGCGGGTTAGGGCCTTGGTCCAGGAGCCAGTCGAGCCAGGGCGGCCACATCCAGGCCTCTCCCT
ACCCTGGCTCTGCCACCAGCCTTGAAGGGCCTCGATGAAGCCTTCTCTGGAACCACTCCAGTTC
AGCTCCACCTCAGCCTTGGCCTTCATGCTGTGGAAGCAGCCGAGGCACTTCCTCACCCCCTCAG
CTCCACGGACCTCTCTGGGGAGTGGCTGGAAGGCTCCCAGGCTGCTGGCCTGAAGGGCAGCCCA
AGTCACGACTCAGACCAGGTCCCACACCGAGCTGCCCACACTTGAGAGCCAGATATTTTTGTAG
TTTTTATGCCTTTGGCTATTATGAGAGAGGTTAGTGTGTTCCCTGCAATAAACTTGTTCCTGAG
AAAC

hide sequence

Protein Sequences


Protein RefSeqs	XP_008014094	(Get FASTA)	NCBI Sequence Viewer
	XP_008014097	(Get FASTA)	NCBI Sequence Viewer
	XP_008014098	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000010280.1

RefSeq Acc Id:	XP_008014097 ⟸ XM_008015906
- Peptide Label:	isoform X2
- UniProtKB:	A0A0D9RNU1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_008014098 ⟸ XM_008015907
- Peptide Label:	isoform X2
- UniProtKB:	A0A0D9RNU1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_008014094 ⟸ XM_008015903
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9RNU1 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCSAP00000010280 ⟸ ENSCSAT00000012237

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000014141	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000012237.1	UniProtKB/TrEMBL
InterPro	STRA6	UniProtKB/TrEMBL
NCBI Gene	STRA6	ENTREZGENE
PANTHER	COILED-COIL DOMAIN-CONTAINING PROTEIN 180	UniProtKB/TrEMBL
	PTHR21444:SF16	UniProtKB/TrEMBL
Pfam	RBP_receptor	UniProtKB/TrEMBL
UniProt	A0A0D9RNU1	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

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