LOC103238722 (60 kDa heat shock protein, mitochondrial-like) - Rat Genome Database

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Gene: LOC103238722 (60 kDa heat shock protein, mitochondrial-like) Chlorocebus sabaeus
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Symbol: LOC103238722
Name: 60 kDa heat shock protein, mitochondrial-like
RGD ID: 18713009
Description: ENCODES a protein that exhibits apolipoprotein A-I binding (inferred); apolipoprotein binding (inferred); ATP binding (inferred); INVOLVED IN B cell activation (inferred); B cell proliferation (inferred); biological process involved in interaction with symbiont (inferred); FOUND IN cell surface (inferred); clathrin-coated pit (inferred); coated vesicle (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: 60 kDa heat shock protein, mitochondrial pseudogene
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11166,923,204 - 66,925,397 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666037178,730,383 - 178,732,603 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_037996814 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JACDXN010000005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_037996814   ⟹   XP_037852742
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666037178,730,383 - 178,732,603 (+)NCBI
Protein Sequences
Protein RefSeqs XP_037852742 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000007632.1
RefSeq Acc Id: XP_037852742   ⟸   XM_037996814
- UniProtKB: A0A0D9RG93 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000011463 UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000009518.1 UniProtKB/TrEMBL
Gene3D-CATH GroEL UniProtKB/TrEMBL
  GroEL-like equatorial domain UniProtKB/TrEMBL
  TCP-1-like chaperonin intermediate domain UniProtKB/TrEMBL
InterPro Chaperonin_Cpn60_CS UniProtKB/TrEMBL
  Cpn60/GroEL UniProtKB/TrEMBL
  Cpn60/GroEL/TCP-1 UniProtKB/TrEMBL
  GroEL-like_apical_dom_sf UniProtKB/TrEMBL
  GROEL-like_equatorial_sf UniProtKB/TrEMBL
  TCP-1-like_intermed_sf UniProtKB/TrEMBL
NCBI Gene LOC103238722 ENTREZGENE
PANTHER 60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL UniProtKB/TrEMBL
  60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL UniProtKB/TrEMBL
Pfam Cpn60_TCP1 UniProtKB/TrEMBL
PRINTS CHAPERONIN60 UniProtKB/TrEMBL
PROSITE CHAPERONINS_CPN60 UniProtKB/TrEMBL
Superfamily-SCOP GroEL apical domain-like UniProtKB/TrEMBL
  GroEL equatorial domain-like UniProtKB/TrEMBL
  GroEL-intermediate domain like UniProtKB/TrEMBL
UniProt A0A0D9RG93 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-12-08 LOC103238722  60 kDa heat shock protein, mitochondrial-like  LOC103238722  60 kDa heat shock protein, mitochondrial pseudogene  Symbol and/or name change 5135510 APPROVED