ENTPD1 (ectonucleoside triphosphate diphosphohydrolase 1) - Rat Genome Database

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Gene: ENTPD1 (ectonucleoside triphosphate diphosphohydrolase 1) Chlorocebus sabaeus
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Symbol: ENTPD1
Name: ectonucleoside triphosphate diphosphohydrolase 1
RGD ID: 18695550
Description: ENCODES a protein that exhibits ADP phosphatase activity (ortholog); ATP hydrolysis activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to aluminum ion (ortholog); cellular response to interferon-alpha (ortholog); cellular response to lipopolysaccharide (ortholog); ASSOCIATED WITH agammaglobulinemia 4 (ortholog); autosomal dominant cutis laxa 3 (ortholog); demyelinating disease (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell surface (ortholog); extracellular space (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1988,921,826 - 89,034,418 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl988,922,007 - 89,032,880 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604849,731,265 - 49,906,385 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
ENTPD1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1988,921,826 - 89,034,418 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl988,922,007 - 89,032,880 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604849,731,265 - 49,906,385 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
ENTPD1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381095,694,186 - 95,877,266 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1095,711,779 - 95,877,266 (+)EnsemblGRCh38hg38GRCh38
GRCh371097,471,521 - 97,637,023 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361097,461,526 - 97,627,013 (+)NCBINCBI36Build 36hg18NCBI36
Build 341097,505,905 - 97,616,454NCBI
Celera1091,256,620 - 91,378,232 (+)NCBICelera
Cytogenetic Map10q24.1NCBI
HuRef1091,099,222 - 91,264,599 (+)NCBIHuRef
CHM1_11097,753,378 - 97,918,865 (+)NCBICHM1_1
T2T-CHM13v2.01096,573,293 - 96,756,364 (+)NCBIT2T-CHM13v2.0
Entpd1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391940,600,810 - 40,730,046 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1940,600,810 - 40,730,046 (+)EnsemblGRCm39 Ensembl
GRCm381940,612,366 - 40,741,602 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1940,612,366 - 40,741,602 (+)EnsemblGRCm38mm10GRCm38
MGSCv371940,734,284 - 40,816,092 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361940,751,297 - 40,794,913 (+)NCBIMGSCv36mm8
Celera1941,460,982 - 41,543,158 (+)NCBICelera
Cytogenetic Map19C3NCBI
cM Map1934.25NCBI
Entpd1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81249,374,810 - 249,502,310 (+)NCBIGRCr8
mRatBN7.21239,425,515 - 239,552,323 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1239,425,430 - 239,552,317 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1247,609,333 - 247,694,716 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01254,313,067 - 254,391,812 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01246,966,100 - 247,044,845 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01259,692,020 - 259,818,922 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1259,739,955 - 259,819,494 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01267,183,177 - 267,259,665 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01267,401,518 - 267,432,848 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41245,783,750 - 245,887,419 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11245,894,247 - 246,001,894 (+)NCBI
Celera1235,318,582 - 235,397,159 (+)NCBICelera
Cytogenetic Map1q54NCBI
Entpd1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555072,036,050 - 2,137,377 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555072,035,918 - 2,141,327 (+)NCBIChiLan1.0ChiLan1.0
ENTPD1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v28107,597,147 - 107,804,840 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan110107,602,465 - 107,811,326 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01092,365,267 - 92,511,852 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11095,871,671 - 95,983,257 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1095,828,094 - 95,983,257 (+)Ensemblpanpan1.1panPan2
ENTPD1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1289,181,851 - 9,311,835 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl289,211,050 - 9,323,939 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha289,357,708 - 9,489,400 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0289,444,087 - 9,575,820 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl289,475,293 - 9,595,910 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1289,160,534 - 9,292,221 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0289,220,048 - 9,351,993 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0289,363,303 - 9,495,027 (+)NCBIUU_Cfam_GSD_1.0
ENTPD1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl14107,263,449 - 107,389,010 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.114107,263,546 - 107,390,923 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.214116,897,330 - 117,022,541 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Entpd1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247377,084,818 - 7,191,918 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247377,011,792 - 7,193,903 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ENTPD1
2498 total Variants

Expression

RNA-SEQ Expression

ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
reproductive system
76 36 20 36 36 60 20

Sequence


Ensembl Acc Id: ENSCSAT00000004183   ⟹   ENSCSAP00000002443
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl988,922,007 - 89,032,880 (+)Ensembl
RefSeq Acc Id: XM_007963683   ⟹   XP_007961874
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1988,921,826 - 89,034,418 (+)NCBI
Vero_WHO_p1.0NW_02366604849,792,231 - 49,906,385 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038009352   ⟹   XP_037865280
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366604849,731,265 - 49,906,385 (+)NCBI
Protein Sequences
Protein RefSeqs XP_007961874 (Get FASTA)   NCBI Sequence Viewer  
  XP_037865280 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000002443.1
RefSeq Acc Id: XP_007961874   ⟸   XM_007963683
- Peptide Label: isoform X1
- UniProtKB: A0A0D9R1F4 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCSAP00000002443   ⟸   ENSCSAT00000004183
RefSeq Acc Id: XP_037865280   ⟸   XM_038009352
- Peptide Label: isoform X2
- UniProtKB: A0A0D9R1F4 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000006143 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000004183.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.420.40 UniProtKB/TrEMBL
  Exopolyphosphatase. Domain 2 UniProtKB/TrEMBL
InterPro GDA1_CD39_NTPase UniProtKB/TrEMBL
KEGG Report csab:103216314 UniProtKB/TrEMBL
NCBI Gene ENTPD1 ENTREZGENE
PANTHER ECTONUCLEOSIDE TRIPHOSPHATE DIPHOSPHOHYDROLASE 1 UniProtKB/TrEMBL
  PTHR11782 UniProtKB/TrEMBL
Pfam GDA1_CD39 UniProtKB/TrEMBL
PROSITE GDA1_CD39_NTPASE UniProtKB/TrEMBL
UniProt A0A0D9R1F4 ENTREZGENE, UniProtKB/TrEMBL