IQGAP2 (IQ motif containing GTPase activating protein 2) - Rat Genome Database

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Gene: IQGAP2 (IQ motif containing GTPase activating protein 2) Chlorocebus sabaeus
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Symbol: IQGAP2
Name: IQ motif containing GTPase activating protein 2
RGD ID: 18692282
Description: ENCODES a protein that exhibits actin filament binding (inferred); Arp2/3 complex binding (inferred); calmodulin binding (inferred); INVOLVED IN Arp2/3 complex-mediated actin nucleation (inferred); mitotic actomyosin contractile ring assembly actin filament organization (inferred); regulation of actin cytoskeleton organization (inferred); ASSOCIATED WITH Brain Neoplasms (ortholog); hepatocellular carcinoma (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN microtubule (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: ras GTPase-activating-like protein IQGAP2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1470,672,171 - 70,979,766 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl470,672,553 - 70,979,763 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604919,502,207 - 19,811,126 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
IQGAP2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1470,672,171 - 70,979,766 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl470,672,553 - 70,979,763 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604919,502,207 - 19,811,126 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
IQGAP2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38576,403,285 - 76,708,132 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl576,403,285 - 76,708,132 (+)EnsemblGRCh38hg38GRCh38
GRCh37575,699,110 - 76,003,957 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36575,734,905 - 76,039,713 (+)NCBINCBI36Build 36hg18NCBI36
Build 34575,734,904 - 76,039,711NCBI
Celera571,592,826 - 71,897,903 (+)NCBICelera
Cytogenetic Map5q13.3NCBI
HuRef570,906,692 - 71,211,466 (+)NCBIHuRef
CHM1_1575,131,847 - 75,437,149 (+)NCBICHM1_1
T2T-CHM13v2.0576,885,042 - 77,189,993 (+)NCBIT2T-CHM13v2.0
Iqgap2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391395,763,685 - 96,028,788 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1395,763,682 - 96,028,991 (-)EnsemblGRCm39 Ensembl
GRCm381395,627,177 - 95,892,280 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1395,627,174 - 95,892,483 (-)EnsemblGRCm38mm10GRCm38
MGSCv371396,397,132 - 96,661,877 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361396,397,132 - 96,661,877 (-)NCBIMGSCv36mm8
Celera1399,243,963 - 99,510,431 (-)NCBICelera
Cytogenetic Map13D1NCBI
cM Map1350.26NCBI
Iqgap2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8228,629,558 - 28,904,649 (-)NCBIGRCr8
mRatBN7.2226,894,836 - 27,170,270 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl226,894,825 - 27,170,279 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0226,161,628 - 26,439,067 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl226,167,199 - 26,438,790 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0245,295,534 - 45,569,560 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4226,039,689 - 26,147,538 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera222,958,327 - 23,102,329 (-)NCBICelera
Cytogenetic Map2q12NCBI
Iqgap2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542524,167,104 - 24,385,146 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542524,167,985 - 24,384,912 (-)NCBIChiLan1.0ChiLan1.0
IQGAP2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2438,597,137 - 38,902,374 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1536,750,767 - 37,056,000 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0538,593,574 - 38,900,327 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1539,137,539 - 39,516,894 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl539,138,359 - 39,516,596 (-)Ensemblpanpan1.1panPan2
IQGAP2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1329,894,192 - 30,134,594 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl329,894,870 - 30,174,259 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha331,132,907 - 31,420,147 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0329,818,056 - 30,105,892 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl329,818,467 - 30,106,093 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1329,749,579 - 30,036,702 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0329,730,444 - 30,016,347 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0330,099,810 - 30,387,253 (-)NCBIUU_Cfam_GSD_1.0
Iqgap2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213190,317,091 - 190,603,571 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936549255,303 - 541,917 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936549256,097 - 541,860 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IQGAP2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl285,294,530 - 85,633,642 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1285,294,423 - 85,633,645 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2286,916,946 - 87,086,957 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Iqgap2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624869889,091 - 1,171,983 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624869888,868 - 1,172,747 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in IQGAP2
7828 total Variants

Expression

RNA-SEQ Expression

ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
reproductive system
76 36 20 36 36 60 20

Sequence


Ensembl Acc Id: ENSCSAT00000013459   ⟹   ENSCSAP00000011459
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl470,672,553 - 70,979,763 (+)Ensembl
RefSeq Acc Id: XM_007975849   ⟹   XP_007974040
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1470,672,171 - 70,979,766 (+)NCBI
Vero_WHO_p1.0NW_02366604919,502,207 - 19,811,126 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_007974040 (Get FASTA)   NCBI Sequence Viewer  
  XP_072870769 (Get FASTA)   NCBI Sequence Viewer  
  XP_072870770 (Get FASTA)   NCBI Sequence Viewer  
  XP_072870771 (Get FASTA)   NCBI Sequence Viewer  
  XP_072870772 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000011459.1
RefSeq Acc Id: XP_007974040   ⟸   XM_007975849
- UniProtKB: A0A0D9RS70 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCSAP00000011459   ⟸   ENSCSAT00000013459


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000015367 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000013459.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.418.10 UniProtKB/TrEMBL
  1.20.5.190 UniProtKB/TrEMBL
  GTPase Activation - p120gap, domain 1 UniProtKB/TrEMBL
InterPro CH-domain UniProtKB/TrEMBL
  CH_dom_sf UniProtKB/TrEMBL
  IQ_motif_EF-hand-BS UniProtKB/TrEMBL
  RasGAP_C UniProtKB/TrEMBL
  RasGAP_CS UniProtKB/TrEMBL
  RasGAP_dom UniProtKB/TrEMBL
  Rho_GTPase_activation_prot UniProtKB/TrEMBL
KEGG Report csab:103223348 UniProtKB/TrEMBL
NCBI Gene IQGAP2 ENTREZGENE
PANTHER RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF UniProtKB/TrEMBL
  RAS GTPASE-ACTIVATING-LIKE PROTEIN IQGAP2 UniProtKB/TrEMBL
Pfam PF00307 UniProtKB/TrEMBL
  PF00612 UniProtKB/TrEMBL
  RasGAP UniProtKB/TrEMBL
  RasGAP_C UniProtKB/TrEMBL
PROSITE PS50021 UniProtKB/TrEMBL
  PS50096 UniProtKB/TrEMBL
  RAS_GTPASE_ACTIV_1 UniProtKB/TrEMBL
  RAS_GTPASE_ACTIV_2 UniProtKB/TrEMBL
SMART RasGAP UniProtKB/TrEMBL
  SM00015 UniProtKB/TrEMBL
  SM00033 UniProtKB/TrEMBL
Superfamily-SCOP RGC domain-like UniProtKB/TrEMBL
  SSF47576 UniProtKB/TrEMBL
  SSF48350 UniProtKB/TrEMBL
UniProt A0A0D9RS70 ENTREZGENE, UniProtKB/TrEMBL