LOC103221771 (class I histocompatibility antigen, Gogo-B*0101 alpha chain-like) - Rat Genome Database

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Gene: LOC103221771 (class I histocompatibility antigen, Gogo-B*0101 alpha chain-like) Chlorocebus sabaeus
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Symbol: LOC103221771
Name: class I histocompatibility antigen, Gogo-B*0101 alpha chain-like
RGD ID: 18684030
Description: ENCODES a protein that exhibits peptide antigen binding (inferred); signaling receptor binding (inferred); INVOLVED IN antigen processing and presentation (inferred); antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent (inferred); antigen processing and presentation of endogenous peptide antigen via MHC class Ib (inferred); FOUND IN cell surface (inferred); early endosome membrane (inferred); ER to Golgi transport vesicle membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: HLA class I histocompatibility antigen, B-67 alpha chain-like; patr class I histocompatibility antigen, B-2 alpha chain-like
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11741,184,309 - 41,187,696 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366709349,243 - 56,483 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_037996054   ⟹   XP_037851982
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366709350,188 - 56,483 (+)NCBI
RefSeq Acc Id: XM_037996055   ⟹   XP_037851983
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366709349,243 - 53,122 (+)NCBI
Protein Sequences
Protein RefSeqs XP_037851982 (Get FASTA)   NCBI Sequence Viewer  
  XP_037851983 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_037851983   ⟸   XM_037996055
- Peptide Label: isoform X2
- UniProtKB: A0A143ZVV2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037851982   ⟸   XM_037996054
- Peptide Label: isoform X1


Additional Information

Database Acc Id Source(s)
Gene3D-CATH Immunoglobulins UniProtKB/TrEMBL
  MHC class I-like antigen recognition-like UniProtKB/TrEMBL
InterPro Ig-like_dom UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  Ig/MHC_CS UniProtKB/TrEMBL
  Ig_C1-set UniProtKB/TrEMBL
  MHC_class-I_related UniProtKB/TrEMBL
  MHC_I-like_Ag-recog UniProtKB/TrEMBL
  MHC_I-like_Ag-recog_sf UniProtKB/TrEMBL
  MHC_I/II-like_Ag-recog UniProtKB/TrEMBL
  MHC_I_a_a1/a2 UniProtKB/TrEMBL
  MHC_I_a_C UniProtKB/TrEMBL
NCBI Gene LOC103221771 ENTREZGENE
PANTHER HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, C ALPHA CHAIN UniProtKB/TrEMBL
  MHC CLASS I-RELATED UniProtKB/TrEMBL
Pfam C1-set UniProtKB/TrEMBL
  MHC_I UniProtKB/TrEMBL
  MHC_I_C UniProtKB/TrEMBL
PRINTS MHCCLASSI UniProtKB/TrEMBL
PROSITE IG_LIKE UniProtKB/TrEMBL
  IG_MHC UniProtKB/TrEMBL
SMART IGc1 UniProtKB/TrEMBL
Superfamily-SCOP Immunoglobulin UniProtKB/TrEMBL
  MHC antigen-recognition domain UniProtKB/TrEMBL
UniProt A0A143ZVV2 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-12-08 LOC103221771  class I histocompatibility antigen, Gogo-B*0101 alpha chain-like  LOC103221771  HLA class I histocompatibility antigen, B-67 alpha chain-like  Symbol and/or name change 5135510 APPROVED