LOC103225849 (adenosine deaminase-like) - Rat Genome Database

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Gene: LOC103225849 (adenosine deaminase-like) Chlorocebus sabaeus
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Symbol: LOC103225849
Name: adenosine deaminase-like
RGD ID: 18658794
Description: ENCODES a protein that exhibits 2'-deoxyadenosine deaminase activity (inferred); adenosine deaminase activity (inferred); deaminase activity (inferred); INVOLVED IN adenosine catabolic process (inferred); hypoxanthine salvage (inferred); inosine biosynthetic process (inferred); FOUND IN cytoplasmic vesicle lumen (inferred); cytosol (inferred); external side of plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: adenosine deaminase pseudogene
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12056,255,834 - 56,268,801 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366603361,261,714 - 61,263,320 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Variants

.
Variants in LOC103225849
419 total Variants

Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_038004096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JACDXN010000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_038004096   ⟹   XP_037860024
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366603361,261,714 - 61,263,320 (+)NCBI
Protein Sequences
Protein RefSeqs XP_037860024 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000017839.1
RefSeq Acc Id: XP_037860024   ⟸   XM_038004096
- UniProtKB: A0A0D9SAF0 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000000153 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000018382.1 UniProtKB/TrEMBL
Gene3D-CATH Metal-dependent hydrolases UniProtKB/TrEMBL
InterPro A/AMP_deam_AS UniProtKB/TrEMBL
  A/AMP_deaminase_dom UniProtKB/TrEMBL
  Ado/ade_deaminase UniProtKB/TrEMBL
  Metal_Hydrolase UniProtKB/TrEMBL
NCBI Gene LOC103225849 ENTREZGENE
PANTHER ADENOSINE DEAMINASE UniProtKB/TrEMBL
  PTHR11409 UniProtKB/TrEMBL
Pfam A_deaminase UniProtKB/TrEMBL
PROSITE A_DEAMINASE UniProtKB/TrEMBL
Superfamily-SCOP SSF51556 UniProtKB/TrEMBL
UniProt A0A0D9SAF0 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-12-08 LOC103225849  adenosine deaminase-like  LOC103225849  adenosine deaminase pseudogene  Symbol and/or name change 5135510 APPROVED